Os03g0351200

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Revision as of 12:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0351200| Description = NAD-dependent epimerase/dehydratase family protein| Version = NM_001056650.2 GI:297600910 GeneID:4332843| Length = 1...")
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Gene Name

Os03g0351200

Description

NAD-dependent epimerase/dehydratase family protein

Version

NM_001056650.2 GI:297600910 GeneID:4332843

Length

1541 bp

Definition

Oryza sativa Japonica Group Os03g0351200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13207844..13209384

Sequence Coding Region

13208026..13209243

Expression

GEO Profiles:Os03g0351200

Genome Context

<gbrowseImage1> name=NC_008396:13207844..13209384 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:13207844..13209384 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgccctcctcctctcctcccacctcaccgccgcctcctcatcctccaccacgtcccccactgctcgaccggcgccaagcttcgtctccttccgcgccgccaacgccgcccctaagggtgcccgtcggggttggcctttccttgcttcgtcggtagagccaccgcctgctgcgtcggcggcgcagccgttccggtcactggcgccgtcggagaccaccgtgctggtcacgggcgccacgggctacatcgggcgttatgtcgtccgcgagctcctccgccgcggccaccccgtggtcgccgtggcgcgcccccggagcgggctgcgcggccgcaacggccccgacgaggtcgtcgcggacctcgcccccgcccgcgtcgtcttctccgacgtcaccgacgcgggcgcgctccgcgccgacctgtcgccgcacggccccatccacgccgcggtgtgctgcctcgccagccgcggcggcggcgtgcgggactcgtggcgcgtggactaccgcgccacgctgcacaccctccaggcggcgcgcggcctcggcgccgcgcacttcgtcctcctctccgccgtctgcgtccagaagccgctcctcgagttccagcgcgccaagctcaggttcgagggcgagctcgccgccgaggcgtcgcgcgacccgtccttcacctacagcatcgtccgccccaccgccttcttcaagagcctgggcggccaggtcgagaccgtcaagaacggccagccctacgtcatgttcggcgacgggaagctctgcgcctgcaagcccatcagcgaggaggacctcgccgcgttcatcgccgactgcatctccgacgagggcaaggccaacaagatcctccccatcggcgggccggggaaggcgctgacgccgctggagcaaggggagatgctgttccggctgctggggcgcgagcccaggttcatcaaggtgccgatccaggtcatggacgccgccatctgggtgctcgacgcgctggccaaggtgttccccggggtggaggacgcggcggagttcggcaagatcgggaggtactacgcgtcggagagcatgctggtgctcgacccggacaccggcgagtacagcgacgagatgacgcccagctacggcagcgacacgctcgagcagttcttcgagagggtgatcagggaaggcatggcagggcaggagctcggcgagcagaccatcttctag</cdnaseq>

Protein Sequence

<aaseq>MAALLLSSHLTAASSSSTTSPTARPAPSFVSFRAANAAPKGARR GWPFLASSVEPPPAASAAQPFRSLAPSETTVLVTGATGYIGRYVVRELLRRGHPVVAV ARPRSGLRGRNGPDEVVADLAPARVVFSDVTDAGALRADLSPHGPIHAAVCCLASRGG GVRDSWRVDYRATLHTLQAARGLGAAHFVLLSAVCVQKPLLEFQRAKLRFEGELAAEA SRDPSFTYSIVRPTAFFKSLGGQVETVKNGQPYVMFGDGKLCACKPISEEDLAAFIAD CISDEGKANKILPIGGPGKALTPLEQGEMLFRLLGREPRFIKVPIQVMDAAIWVLDAL AKVFPGVEDAAEFGKIGRYYASESMLVLDPDTGEYSDEMTPSYGSDTLEQFFERVIRE GMAGQELGEQTIF</aaseq>

Gene Sequence

<dnaseqindica>142..1359#gcgctctcggatttggtcgcgacgccaccaccaccacaaacgctcgccggccgggctctgatactgccggcctccacgtcgccctccgcctccctccccgcattccgtcgagcacctccgcctccctagccggcagccgccatggctgccctcctcctctcctcccacctcaccgccgcctcctcatcctccaccacgtcccccactgctcgaccggcgccaagcttcgtctccttccgcgccgccaacgccgcccctaagggtgcccgtcggggttggcctttccttgcttcgtcggtagagccaccgcctgctgcgtcggcggcgcagccgttccggtcactggcgccgtcggagaccaccgtgctggtcacgggcgccacgggctacatcgggcgttatgtcgtccgcgagctcctccgccgcggccaccccgtggtcgccgtggcgcgcccccggagcgggctgcgcggccgcaacggccccgacgaggtcgtcgcggacctcgcccccgcccgcgtcgtcttctccgacgtcaccgacgcgggcgcgctccgcgccgacctgtcgccgcacggccccatccacgccgcggtgtgctgcctcgccagccgcggcggcggcgtgcgggactcgtggcgcgtggactaccgcgccacgctgcacaccctccaggcggcgcgcggcctcggcgccgcgcacttcgtcctcctctccgccgtctgcgtccagaagccgctcctcgagttccagcgcgccaagctcaggttcgagggcgagctcgccgccgaggcgtcgcgcgacccgtccttcacctacagcatcgtccgccccaccgccttcttcaagagcctgggcggccaggtcgagaccgtcaagaacggccagccctacgtcatgttcggcgacgggaagctctgcgcctgcaagcccatcagcgaggaggacctcgccgcgttcatcgccgactgcatctccgacgagggcaaggccaacaagatcctccccatcggcgggccggggaaggcgctgacgccgctggagcaaggggagatgctgttccggctgctggggcgcgagcccaggttcatcaaggtgccgatccaggtcatggacgccgccatctgggtgctcgacgcgctggccaaggtgttccccggggtggaggacgcggcggagttcggcaagatcgggaggtactacgcgtcggagagcatgctggtgctcgacccggacaccggcgagtacagcgacgagatgacgcccagctacggcagcgacacgctcgagcagttcttcgagagggtgatcagggaaggcatggcagggcaggagctcggcgagcagaccatcttctaggcctcgctcgccttcttggctgccattgccagtttcttggtgcttgtaagttgtaaattactacttcatccagagtgtttgtagagatgtgagttgttcttaatgtttcagacgccattagccattcaattgtaccatacaatgcattgcctaattccaaaggaggatagttttgctgtgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0351200, RefSeq:Os03g0351200