Os03g0351400

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Revision as of 12:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0351400| Description = Similar to Tubby-like protein 3| Version = NM_001056652.1 GI:115453032 GeneID:4332845| Length = 2974 bp| Definition...")
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Gene Name

Os03g0351400

Description

Similar to Tubby-like protein 3

Version

NM_001056652.1 GI:115453032 GeneID:4332845

Length

2974 bp

Definition

Oryza sativa Japonica Group Os03g0351400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13216566..13219539

Sequence Coding Region

13217774..13218242,13218646..13218825,13219197..13219326,13219426..13219537

Expression

GEO Profiles:Os03g0351400

Genome Context

<gbrowseImage1> name=NC_008396:13216566..13219539 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:13216566..13219539 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tactcaagtctacgtgatgtgcagcctggcccaagagacggcactcttaaatgtttcataagaagaaaccggactactcagacatattatctgtatattgggctcacagaagcacttgccgatgatgggaagttcctacttgctgcacgcaaatgcaggaagcccacatgcacagactacctgatttcccttgacatgagtgatatgtcaaaggggagcaacacctatattggcaagctaaggtcaaactttctcggaacaaagtttaccgtctatgatgcccatccaccatatgatggagctgttgtctcaaaaagtcggtctgcacgtgtggttggtctgaaccaagtctccccgagagttcctgccgggaattacccagtttcacatatttcctacgaattgaatgttttgggtgcaagaggtccaagaaggatgaactgcattatggattccatccccacatcagctgttcaagagggtgggaaagctccgacacagactgaatttcctctcagtggcctcgactctttcccatcaatttcattcttcagatcaaaatcagctcgaatagatagtgcaacttcacaattatccactcagaaggaagaaaagctggttctgaagaataaatctcctaggtggcatgagcaactgcaatgttggtgcctcaacttccgtggacgggttactgttgcctcagtgaaaaactttcagctggtggcgtctgatgaaaatgggccaactaaccaggagcaggacaaggtgattctccagtttggaaagattgggaaggacttgttcaccatggactaccgttatccgatatcagcatttcaatcatttgcaatctgtctgagcagttttgataccaaaatagcctgtgaatga</cdnaseq>

Protein Sequence

<aaseq>YSSLRDVQPGPRDGTLKCFIRRNRTTQTYYLYIGLTEALADDGK FLLAARKCRKPTCTDYLISLDMSDMSKGSNTYIGKLRSNFLGTKFTVYDAHPPYDGAV VSKSRSARVVGLNQVSPRVPAGNYPVSHISYELNVLGARGPRRMNCIMDSIPTSAVQE GGKAPTQTEFPLSGLDSFPSISFFRSKSARIDSATSQLSTQKEEKLVLKNKSPRWHEQ LQCWCLNFRGRVTVASVKNFQLVASDENGPTNQEQDKVILQFGKIGKDLFTMDYRYPI SAFQSFAICLSSFDTKIACE</aaseq>

Gene Sequence

<dnaseqindica>1298..1766#715..894#214..343#3..114#tttactcaagtctacgtgatgtgcagcctggcccaagagacggcactcttaaatgtttcataagaagaaaccggactactcagacatattatctgtatattgggctcacagaaggtatgctgtttatccacccctggtacgccaaattaagtacagctatgctggcgtataatggatatatgcttactattttcgggaagtttctttttacagcacttgccgatgatgggaagttcctacttgctgcacgcaaatgcaggaagcccacatgcacagactacctgatttcccttgacatgagtgatatgtcaaaggggagcaacacctatattggcaagctaaggtgatcttttgagatttcatcactgaaaagctaaagctaaatttgttcctagtttctttagtagtatgtgtaaggaaggccctttagatgtactataggctgtttcatataaaagcatcacatggcatttttccccctctccttttgctgtaagtgttagaatttggaaagtacaagaaattgaagtgctatgcatttcacatctaaactattcattcaacttagaacaaaactgtatgtatttggatgtcaagtgcattactcaaacttaatcttcagttatatcttttttttgtttgtttcttacagatctaaaaatatagcctacaataacaattaaaagaaccagctaaccacctttgttttaacaggtcaaactttctcggaacaaagtttaccgtctatgatgcccatccaccatatgatggagctgttgtctcaaaaagtcggtctgcacgtgtggttggtctgaaccaagtctccccgagagttcctgccgggaattacccagtttcacatatttcctacgaattgaatgttttgggtgcaaggtattgaatcagcacttgtgttatgccgagtaaatctatggatagtattggtaaatattgtcatcaacacctgagaccttaatatgtgaattcatcgatagttagaatcacagtggtgattactgcaattgcatgattgatcaattagacatgctgaatctattttttaagaaaaggctctaatgataaaagtggtgataacatcacaactccgtgagccttctggctgttatttgagcacacatggctaggaataattatatagagaaggcggctgaccagctgtcataattccatatacgcaaccttttcattgttgattgactttgcatgctagatttgactgcttctacaatacttcgtagaaaattgcagtgatttttgtgatgcattcctattgcagaggtccaagaaggatgaactgcattatggattccatccccacatcagctgttcaagagggtgggaaagctccgacacagactgaatttcctctcagtggcctcgactctttcccatcaatttcattcttcagatcaaaatcagctcgaatagatagtgcaacttcacaattatccactcagaaggaagaaaagctggttctgaagaataaatctcctaggtggcatgagcaactgcaatgttggtgcctcaacttccgtggacgggttactgttgcctcagtgaaaaactttcagctggtggcgtctgatgaaaatgggccaactaaccaggagcaggacaaggtgattctccagtttggaaagattgggaaggacttgttcaccatggactaccgttatccgatatcagcatttcaatcatttgcaatctgtctgagcagttttgataccaaaatagcctgtgaatgagataaggtgatcatttctctctattcagctttactactatcgacatttacacatggttacttaccctgcttgatataatgacacttaatacttgcttttatctagatggtcttcagtttacctaattgtttcttcaacagtattatgaaagctgactcacattttcagaaccttccaaacttcagacactagatagtcagattaggagtactagtagagcagtagttgatccaaaatctgagctggctgttaggcatatctgaattcatcggtctgcccatatgcaaatcgagcttttctgttgggatgtcacatcagaagagaatagatggcaacacatgtatgcaatttgcaccagatgatagctgccctctgtgttttacccttagctccgtaatcactactgattcagcctgttctgtaaactacagttgcatacttgcttgggtacggtttatgtgccatgaaacgtgacacgaagcaaagaaaaataattttagagtagggattttatgtttctactcttagcggtttaaatagaaaacaataagaaaaccacgtagaccaatctgaaattaagtttcaaaaattcaaatttagccttggtttataggctgacgagttgccaatggaactcgcaaaaatacctcttaagctgcagttgcgcagttgttttccatcactgtccaggcatagctgcattcatgcagctaaatcacaatcagatgaaccgcatcctaatcaagatttttggccgcgaatgcaatgtacctgcaggtgctggatgaaggacgaaccgtggaagcatgataagctggatcggcaggcgtagcgtgcacgagtcacgcttgacattgaagcacaaggatttgtttggatttgggcagaaaaaaaaacaccaagtccatctcctgaagttgctgccccggatgctgctgctgcagtgtacataatagccacctgtgatctttctggcctcctggcttgtaattctgttctagtttgttttttttttctaattgttacacattcttgggcggtgccggctgttgaaacctagagagtttcttcttctttttaatctcccccaatttacattgtaaacggcaggcttgtgtagccaaaaatgccaagttgtgtgttgcaagttgcaacttgatgtgttctttaaattagtgtaatacatggagtaataggctgcagtgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0351400, RefSeq:Os03g0351400