Os03g0352200

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Revision as of 12:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0352200| Description = SAC3/GANP family protein| Version = NM_001056656.1 GI:115453040 GeneID:4332850| Length = 4116 bp| Definition = Oryz...")
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Gene Name

Os03g0352200

Description

SAC3/GANP family protein

Version

NM_001056656.1 GI:115453040 GeneID:4332850

Length

4116 bp

Definition

Oryza sativa Japonica Group Os03g0352200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:13270050..13274165

Sequence Coding Region

13271714..13271935,13272487..13272708,13272827..13272912,13273105..13273201,13273592..13273684
,13273806..13273961

Expression

GEO Profiles:Os03g0352200

Genome Context

<gbrowseImage1> name=NC_008396:13270050..13274165 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:13270050..13274165 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttttgcagaactatctcttccacgagtgtacaggcatcagatatacgccctctcccagtcctgcgagaaacaatggattatcttttgcatttattggattcctcagagcatcagtttgagatagttcatgattttatatttgataggacaaggtctgtgaggcaagacctcagtattcagaacatagtgaatgcccaagcaattcaaatatacgaggatgtgataaagtttcatattctatcccatcagaagctttctaggtcttcccaggattctgatgcttcttccctgtgttacctaaacatggagcagctaatgaagtgccttctttctctgtttgatatgtatgatgtaattcacaagaacaattcacagagtagtaaagagactgaatattattccttctacgtgcttctacatttgggctgcaagatacccaaaatggtagattcactctctttgtggtatggccatctatctgcttcaattatacaatcaaaggaaatggtatttgctagatctatattaagattctaccacctaggaaacttcaagcgtttcttctgcgccatagcagctgaaggaaccgatcttcagctgcgtctgttagaaccttttctcaatgaggctcgtgttagagcattaatgtacttcaatcatagtggctacaaacttcaacaccaccctttgacacatttatcagaaatcctaatgatcgaggagctggacctggaaactctttgtagattatgtggacttgaaattagcaacaacgaagatacgaaagcttttgctcctaaacaggcgagtttctgcgtaccagcatcaattcctcaaattaatggcatttacatatcaagggagaatcaaaggtga</cdnaseq>

Protein Sequence

<aaseq>FCRTISSTSVQASDIRPLPVLRETMDYLLHLLDSSEHQFEIVHD FIFDRTRSVRQDLSIQNIVNAQAIQIYEDVIKFHILSHQKLSRSSQDSDASSLCYLNM EQLMKCLLSLFDMYDVIHKNNSQSSKETEYYSFYVLLHLGCKIPKMVDSLSLWYGHLS ASIIQSKEMVFARSILRFYHLGNFKRFFCAIAAEGTDLQLRLLEPFLNEARVRALMYF NHSGYKLQHHPLTHLSEILMIEELDLETLCRLCGLEISNNEDTKAFAPKQASFCVPAS IPQINGIYISRENQR</aaseq>

Gene Sequence

<dnaseqindica>1665..1886#2438..2659#2778..2863#3056..3152#3543..3635#3757..3912#attgttccactccacggttcaactaaccaccaaattaccagactacccctcggagctcgaggccaagggccgccatggatcgccgggacatggcgagccaccgcggccggagttccactcgtggccacggatggggccgaggctggcgaggtcggggagaaggccgcggccttggtctcagccgcggcgccggcccctcaccgccacctcctccttcctcctccacctcttccttcccggcggcggccagcgccaccgcggctggtaccggcggcgacgccccgccgatcgtgggcagctgccccgacatgtgcccaggtaacgcgcttcgtccaagcctcccgtgcgctcacgccgacgctggctgacctgacctgacccccgtttggcggggcgaattgccccccacctgttcgacgaaattgcgcgatcagttggcccctaattggatggatttggttggcgcgttttagctcatggatgctactgttttttttcctgctgcagcgagggagagggcgcagagggagcggctgagggacctggcggtgttcgagcgggtgggcggcgaccccgcgcgcacgtccccttccctcgccgtgaagaaggtgagccatccatttttctccgtactcatgtggaggccattcctgattttttttttctttttgaacttgcggttgggtcgtggtgatgcttcactgctggtcatttttggtgcgtatctgcttggattgttctctccatgcaaatggacaggctatagcttggttccattccatgtggtggtttagtctgttttgattggatttgatatggagctggaagcttttttttgtgcatgcaactgtgcatgtatttttgcttaaaagggtgatcagttgccgttaagcatgtgttggaacaatcaacactttatgttagatgtagctatatagttacatatgccaccaataatgcaataacagcaatgcagcactaaatctgatctacgcttgtcttgtccaatcactgccagagtgtaaggaagctattcgggtagcctagccttcaagagattgaatgtacgatagtgtcagatttatatttattttgtttgatttctttttatagtttattggatgaaatataaccctacttagtacttaccttgtactagtatttttgcaggggtgaagatatgatgaaaggacaggattatcaattcatttaatacttatttttatcttgaatatgtggtcatgtttgcagataaaagaaagcaatgtgcaaaagcagattatgattttttttacattatttatttagcatgccattgttattaggtaaaaagagcttgtatcaacgaaaataatagttatacaatgagatatcatgttctgcacacttgaggtgaaactgtcggaattcatttacttgccactgcaaacttgagtaaaaatgccactgaaaaatcataaaaggtgtgtaagataatgaatctttaccaaccacatagaatagccaatttgccacctgaaaacactgttataattacaaatttgcactacagtttcatgtggtctgaaagatttcatgaaccgcgtgtgttttaagagaatcaggtagctatttgagaattctgtgtatctccgttccttttctaacacttggtttcctgctagttttgcagaactatctcttccacgagtgtacaggcatcagatatacgccctctcccagtcctgcgagaaacaatggattatcttttgcatttattggattcctcagagcatcagtttgagatagttcatgattttatatttgataggacaaggtctgtgaggcaagacctcagtattcagaacatagtgaatgcccaagcaattcaaatatacgaggatgtggtacactcatatcatccatgtttttatcttattgtatagacctctgaattttagggtacttatttgtctggtttagattgttgtgtctggaatctaacttttaacattatagaattgagcatccttatactctatcacagaactactactcaacaactttctctttgttttccttgtaaggttatgttccatcctttttaagtagttgaggccagaaaattcactcatccaaactcttgttagatagagtaatactcgatatgcataaaatgttgttgaggttctcgccttttctctctaattggtttgggagaaagtatgtttcttttccgattatgcatgaattagttctttcaggcattttctacttggcatctgtgttagccactaagtggtcctttttgttcgttagatgctgttatcttttgatgttatgctgccggatgtcattttgttaaggtggaggaacatatttgcttcaagtgcaagcatatagggtagattattcctctttcacagctttatctgatgcatgcccctgccttctgcagataaagtttcatattctatcccatcagaagctttctaggtcttcccaggattctgatgcttcttccctgtgttacctaaacatggagcagctaatgaagtgccttctttctctgtttgatatgtatgatgtaattcacaagaacaattcacagagtagtaaagagactgaatattattccttctacgtgcttctacatttgggctgcaagatacccaaaatggtttgcccccaatttttattgccttctaaataatctaatttatgttattctcttgttcccaatactttcttcttactccagctagtgaatagtagcctaatttcctgtttatctccaggtagattcactctctttgtggtatggccatctatctgcttcaattatacaatcaaaggaaatggtatttgctagatctatattaaggtaactttatgcatattatttgtatcaacatacatagagccttcatttttgtcatgctctaagagccatcatgcttcttgagtcttctttgtgcacagcagtatgatttgggacaactcagaagtgctaactattgagacacatcattttaaacttaattgatatatatatgttctgatcttctttctgcagattctaccacctaggaaacttcaagcgtttcttctgcgccatagcagctgaaggaaccgatcttcagctgcgtctgttagaaccttttctcaatgaggtaagccgaacagcaattttgacccttttaatgataaggtgatatccttgccttctgtatgtacatttgagcctgttatatccatatggtatctgttatctagcttttacaaacatagttgttaagtgtaaagtaggtgcccagttgcccacatactgctgaagtgtttaattgtttgtgcaaaaaaacgaattgctgcaattgttagttaaattttcctcacccgttttaaaattgtgttctgatcctttcagtatgaatgagaattatctcaagtttgtgttatgctagtggttgttaccagcacatttctttattcacaagctttaatattgctggatatatttcgttctgacatatcaattttttttgcctgctttgctgccaaaggctcgtgttagagcattaatgtacttcaatcatagtggctacaaacttcaacaccaccctttgacacatttatcagaaatcctaatgatcgaggtacgcggacaccacccttcgacatatatttttactgcagttgtgcattttagttgcagctttagtgaacagttctaaaatcatcagctggatgttgattcttgttttggaacttctttaggagctggacctggaaactctttgtagattatgtggacttgaaattagcaacaacgaagatacgaaagcttttgctcctaaacaggcgagtttctgcgtaccagcatcaattcctcaaattaatggcatttacatatcaagggagaatcaaaggtgaaaaaaatattgtagcgaatgtaaaatgtactccattcttcacttgttcagttgtgtgctaaagcacctatacttccaagtatccaatacggaaagcaattgatcccagtaaaagaaaattacgaatgataacagtacattttcttgtattctctccaacaaagtgtattttgtgagcttcgatgagtagttcagtattctcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0352200, RefSeq:Os03g0352200