Os03g0355200

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Revision as of 12:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0355200| Description = WD40-like domain containing protein| Version = NM_001056667.2 GI:297600920 GeneID:4332861| Length = 10821 bp| Defin...")
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Gene Name

Os03g0355200

Description

WD40-like domain containing protein

Version

NM_001056667.2 GI:297600920 GeneID:4332861

Length

10821 bp

Definition

Oryza sativa Japonica Group Os03g0355200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:14124661..14135481

Sequence Coding Region

14134105..14134323,14134401..14134482,14135171..14135265

Expression

GEO Profiles:Os03g0355200

Genome Context

<gbrowseImage1> name=NC_008396:14124661..14135481 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:14124661..14135481 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgattttactttcttttcaggtcttaggagtgagcttctcccctaatggttatctggttgcaactggaagtgaagacaatttctgtcgaatatgggatttgaggactaaaagaatgttatattctataccagcacataagagtcttatctcacatgtcaagtttgaaccccaggaaggctattatttggcaacttcgtcctatgacaccaaagcagcactgtggtcagctcgtgattacaaaccaatcaagagtttggtggcccatgagtcaaaggttactagtttggatattagtggagatggacagcagattgtgactgtgtcacatgatagaacgatcaagatttggtcctgcagaagcagggcacaagataatgccatggagctggactga</cdnaseq>

Protein Sequence

<aaseq>MILLSFQVLGVSFSPNGYLVATGSEDNFCRIWDLRTKRMLYSIP AHKSLISHVKFEPQEGYYLATSSYDTKAALWSARDYKPIKSLVAHESKVTSLDISGDG QQIVTVSHDRTIKIWSCRSRAQDNAMELD</aaseq>

Gene Sequence

<dnaseqindica>9445..9663#9741..9822#10511..10605#atttggcaacttcgtcctatgacaccaaagcagcagtatgcctaataataatgcgccatttattttatttcttttattgtctcatttctgatattcttccttccttttgcagctgtggtcagctcgtgattacaaaccaatcaagagtttggtggcccatgagtcaaaggttactagtttggatattagtggaggtaaccacttgcttaagtgccttttatctttgctgtatgtgaaattatatttggatatccttttcttgtgagaattgagatcaatagttttagccctttttatctgtccattcctcatatcaagttggacatccaccatttggttatgctaaaacaaattcccatgtatagtgcacttggattttcttagccaatatcaacactctcatctctgaactaactgcagttgttagagcagtgatgctgctaaaaacggttcaaaccaaacctatttgtctgtattacttttagaaccttatagatctatgctattctatggtgcactttcatcgtataaaattgcatatcatgcatttcccaccatttgtttgtttgtccttaatggcatacccatcttgtttctttaatcctttgttgaaaatggtatctgccagttgtacgttctgattgttctttccatctctattctccctcaacttgtttcttgcaaaatgtatcagcttttgatccttattcctaacagatgccctagtaaactctagggatcggtacattaggtggcgttgttgtctcattcttcattttccttttcaagattgtgccgtattatcatgccatccacttgccacaagattcaaacatgtcatatctgaatttctaattggtggtttgtgtaaatcttgtgcagatggacagcagattgtgactgtgtcacatgatagaacgatcaagatttggtcctgcagaagcagggcacaagataatgccatggagctggactgaggcactgaattaacttgttagaagttgtcagcatctacatgaagccatcttgtagttgtagcacctcatagcccttagcctgtgaaatgtttcatatgtaactcttctacttgacgttgtagaaaatttacgatcgaacggcttaggggcgattacccctgtcctgggtttgcatccctggttttgaagttacaatggcatggatctaattaaccctagtttttttttatgccagtattgcttcacatcaggacgtaggttatacattcccacacttgtggaatcaatccttggaattgcaacaggctagatgcatttacgttctaatcaagataataatctcacaaggtctttacgttaaccactcttaacaattccgactagcaatactcaactagtcatgtatggtcaagcaatataattctgataatatattttggatggatgtgactagatttattatactagttatgtaacatccatccaaaatctcttatattgtgttcatcatctgatttcataacggtggcggcagcaatataaaacctaaagagtcagcttgcaaaacagcaagacggcacgaagaatacgatccctaccctaccaagtaagcagcagcctggcaaaatgaagtctgctccagcatcacgagccgtccactgttgtcaagcaaaataaactagaagttagaaggatggcaatttcatgctagctgcttttattcctcagagcaatttaaatggcacaactagcagtacaatactaattaacaacaaatcagtaagtataggtcacaccaattgaagctaaattaatcatctcatctacagaagcttattcctcagagtatcttaaatggcacaactagcaatatagttataataattaacaaacaaatgagagtatgggtcacaccagttgaagctaaattaatcatctatccttattcttcagagtatcttaaatggcagtgtggcacaactagcagtatatttataacaattaacaacaaatcagtaaagcatggatcacagcagttgaagctaaataaatcatcatctcatcgacagactgcagaagcttatagcggtagaattacctgacctcatcatctcatcgacagactgcagaagcttatagcggtagaattacctgacaaagatgtcactacggtaatgacgacctcctcctcttggttgcaattgggcgtccctgtgtcttggctggaacagactcagcagcaatagggcgaagagacagattctgaaggtctttggaaagatccaaacccaaaggaggaacaatgtcatcagggcaggatgagagggtcaaggacgagaggagcttcttgctgtgcatgttaaggctgaccatgtacagctctgcatcggcatcgttgagcatgaaactaaggacaccatcttcctgagggttcaggacagggctaattggtatggccttgggcaacctcgccttgtcgaagccctccagctcccacagatctgccaccatgagttgtgcatctttcagccactccccggttgcgagggtcagtgtccacatcgttatcgcacgatcgccggtgtgcgcagagctggatccgccgtcactgatgcagacgaacttgatagagtcaccgcagccgtcgacacagctcattgtgcggcatagctggaggtcacccctcatggcgaaactgattttaagatggcactctacaggcagcgggatgtagcggaattgcacggcatcatcattgcggccggagagagcatcgtcgcacctacagaagaggacgccctttgcgaggtcggcccagaacgcgtggcctccgaacgagaacaccttgtcaccgtggaaggaacccggcatctgtgatgggaagatggcgtccttgaattgccatggcgtgatgccccccctggaacttgaggatgatgatggccgcggtgggcacaggcagagaacatcccggtagacgtctcgccccgcttccatgtcaaaccgcatgtccttagccacgatggccagcgagtagctgctgcgcagcgcgtagccaccggcggcggcggtgcgcagggggagaggccgcatgctgcagtaggtgaggcaggactcgggcaggcccgggatcatggagagcgacttgccgacgacgtcgtagacgaggtagcagctgcagccatcccggaagcacgaggtgagggcgatgaggccgtcgcctgccgcctcgacgtaggtgagcggcgggtcgtcgtacggtgacgcgtcgggcaagttggggatgggcgggacggcggcgccgggggggaagctggccggcggcggcctgggcacggcggcggcggcggagaggcggatggagagctcggagagacccgggggctccgcgaggcgcgccaggagcagcatgcccttcaccctagcggcgttcctggggtagcgttcgtcaccggggtggcacccgtacgacttccagtccgcgcactccatggccgcccactccgactcctcctcgacggcttcctcctccgatcgaacgatgcgatccagaagaacataggaaggtagtacagttcttcccatggcagccatggaaggcggaggggatcggagtttaggttaaggattgggggaggaggcggaggggatttttcttttcttttcttttctttttttctctttttgattcgaaggctccggggatatgacttcttctgagcgaacgatactcgcgtgttgtaggtatagatggccaaaacaggcgcggggccgatgacccggcccacagtacggggtttcggctcggctcgactggtgtcaagcctgtgctgatccgtctgaccgttgagttgtgtctgggcctctgcctacgtaaggtgggtcggcccggcacgatacggttcaacgatcaggaggcaaaacagttgaggatacaaagtagacttatttcaaccatataaaatactacaacccaaagaaggagcacgatggactatcttatcttctggtcagcccgagtcttattaggtcgtgcctagaccgttgatgcagcctatgggcaggcacgacccaacacggtgtgtaggttgggccgtgccggcccgactgatcttgggctcaagcctagtcgtgcccgggccgggccaagctaggacaggtgggccatttggccatctatagtttggggcttggaagagaaagataacatagattcgttagttgcatggcgactcggatcgtggcttcatccaacgtctgatgtctagcaccaacaaacacaacgggagaatgaccccgggactcggtgcactatgcttttaatatggactatggcttatttcttaatatcatattttttatgcaacattgtggatgactaatagtttcatgtcaagaagatgggggtgggaatctcctggcctgctgctgctgcatcatgatatacgatcacccgtgaaccagagacgcactgcatctgctcactaaaagaggtgtttcgtcactccatcgtgttttccttgtggagataaagagacgatacgggtgtgggtggagatgggccgaaagcaacattttaagtctaataagcaaaagctagatggataaatgtcatatgaatgaaattgaatggattgggtgaatagacgaaatcaaacgatacaataagtgtaattctcaaaagtataatttatactgtaagaacctaatcttagaaatattataagaactagcaaaaatgcccatgcgttacaacgggtgaaaaaattctaataataatatacgtttttcatgcataatcatgttaatgacaatgtttgtattttgatgagcggcttgtttttttataaacagtgtttttcttcttgcgcgattttctcaaactatttttcagaaatggcgcatttctttctaatagttttttcctagcatgttttttttctttttttaatgacgatgaaaaccatatttttctccccttttttttgcttttattttctcgtgtgttttttgcatgttttttctaacaatcattttctcgcgcgcttttttcttgtctttttgttaaatgttcttttttgctttttttttcaatacatgacaatatgtgacgaaataatagccgtgtagtagatggcaaaaaatcgatggattctatctgactcaagcgtccatcaatttagtgttttttctgacagttttttcagagcgatttgtttttaatagatggtgcttttttttcttgcgcggttttttcaaactatttttttagaaatggcgcgcttttttacagctttttcctcgcatgttttttttaaaaaaaaaattttaccggcgatggaaataattattctcgcgcgtttttttgttttatggaagatgtaaaacctttttagcgtgtttttttgcgcttttttctaacttttttctcacgcgttttttgaacagtttttattttctcatgcattttctatttttagattagattagagatagagaagagatatatactgattagaaatcggactttgtttcgccctttccattttttttctcacgtgcattttttattttatacaaaccagcttcttattttttacgaaccatttttttcgccacttctttaagggaatcggacagacttttttagatgttttttttggatttttttcgcctttaaaggaatcactttttttctcttttttcttttttaaaggaattagatctagcgtttttttttcaccacttttttttgccttttatagtaatcgatttttttccattcggatctacgcttttttttcacttagggaaacagacttttgttgttattgtttttctttttttgtgcggcttttatttttctttttatgcacctttctgcctttgttctctcacttttatcatttttttaacaaaaacaacctcaagaaccttattgcaaagattatagggactcaaatgtaaatataaaaattacagggactcgaatgcaaaagtacaaatccaaaaattaaaattatataaaaatggaatgctctcgacctgtagattccatttttgcaaataaatcttcaatccggcacatcaattttttttaccaagatgtataggatatcatgatatagattgaaacgtgcctgggatctcggactcaaaccgagaggaatagtgcctttttttttctttttaagggggaatcggatatagagtcggacttttttttaatgagaggaatatgagtcaggccagaggaataggagtcggacctttttttattattattttttctctatttttgagtcggactttttttttattttttcgctattttttgatgggcgaaggaagcatctcttattttgggatctcggacttaaaccgagaggaatggtgccttttattttttctttttaagggggaatcggatatagagtcggactttttttttatgagaggaataggagtcggacctttttttattattttttcgctatctttgagtcggaccttttttttaattttttcgttattttttttgacggacgaaggaagcatctcttattttttttaaaagtatatataagtagagatagagattaattcaactaaagtaaaaaaatccccaatttcaaatagaccgaaatgcatgtgtcatgaattgttcgcatcttttgtgttctatctagattcaaatgaacatttgtaaattttccgctggagtagtttttacattttaaacgagtgttattcgaacaacagtttttatggcaattttgcaattgcaatggcgattcaaaaaaaacggcaaattacaattaccccaaatcatatactcctaccgtaattaaccaacatagaaaggggaattaaatcaaaagagccttcgcgctgcagcccgcgacgcctccgcctccgtctccgtcgccaccaccgcctccgcctccaaaaccctaaccctagctcgccgccttcgcgcgagctctcctccatggagaaccccaggccacaggctcctgcggggacccctcccatggctcccctccccgtgcccccgcccatcgcccccatccctgccccgcctccgcgagccccagcacccgccccggccgccgccgccgccgtcgcctcgacctccgcggcgggaggaggcggcgggggcggcggtgaggctgactacgaggtctccgatgaccaccgcgccgcgcgggagcgccacgagcgcgcggtgcaggagctgctccagcgccgccgcgccttcgccatggccgtgcccaccaacgactccgccgtgcgggcgcgcctccgccgcctcggcgagcccgtcacgctcttcggcgagcgcgagatggagcgccgggaccgcctccgcgctctcatggtccgcctcgaggccgacggccacctcgaccgcctcctccgcgcgcaggaggaggagcagggcgccgcgggcgccgaagaggaggaggagcagatccagtaccccttcttcaccgagggcacgcaggagcttctcaaggcgcgcgtcgacatcgcgcagtactcgctgccccgagccaaggccaggatagagcgggccaagcgctgccatgacgaccccgacgaggaccctgaggcagaggccaaccttgtcgttaagcaggcggaggatttcgtgcttgagtgcagcgagattggagatgaccgccccctcaccggctgctccttctctcgagatttttcaatgctcgctacaaggtacggccacttaatcaaacggaatagcgtagggttttatctttgtatgtcttaaaatagtggaatgatttgctcgccgaagtgttgcaatcgtcttattaggtcaattgttaatatgggtttggtaacttgcttaacttgtcccagtttagcatatcaattgagtaaaagctgttctaagtttgggattggcaatgactgaaaacactctgaattgctgctatatatggcagatggccgtgtttcttcacatttacactgctgctgcatagaaccatgctgttctgcttcagcatttctgtcatgattgctttgcgttgaaccaggtgcagctagcactcgttcaaaattgcaatcacaatagttcatcatggcgtgatatcggctggatgaatcaacaaatttttttatggctgtatgatttatagaactagctagcggctcatgtttgggcagctagaatttccttccattgagcagatggaggatggtatcatgcttatcggctagcactattttgagcaggctggtcttcacatttgcaggattgcctgtaacagaactattgcggtgttccaaaatacactaggtgggtggcatggtagcatctggctccttctcgcatacagggtatcttcacaatagtggagtatccctgatgattttcaattgtgatgctaattgaatttcataggagttcatatacacattgtttttggaagggaagttcatgcacgcttaggctgcatttgcttcaacatttcatcagattggccaatttcctaacctgaaaagacactcgattagatcatgattaattaagtattacctattataaacttgaaaatagatttatttgaatttttaaataaacttctatatagaaagtttctttcaaaaatcacaccgtttagcggcttgggaagcgtgcccgcgttaatctggtgctagtagctgaaaagaacatagccttagtaattttggtaaactaattgttgatgtcatgttgttggatacctttttccttaatcttgagcctcaattagcttatgttctcttgttcttggccttaacttatgttttcttgttcttgcttccttgtcagtaaataatgactttatttctgtgttttttagttcatggagtgggatgatcaaagtgtggagtatgccacaagtaactaaaattgcaactctgaaaggtcacacagaacgtgcaactgatgttgcgttttcaccagttgacgactgcttagcaacagcttcagctgataaaactgccaaactatggaagaccgatgggtcactcttattgtcctttgatggtcacctcgatcggcttgctcgccttgcttttcatccatctggagggtaccttgctacagctagctttgacaaaacctggagattgtgggacgttagcactggaaaggaacttctactccaagaagggcacagcagaagtgtctatggagttagctttcacccagatggttctttagctgcatcttgtggtcttgatgcgtatgctcgagtttgggatttaagatcaggaagattgtggggcacactcatgggacatgtgaagcctgtaagttcatagcatcaattttccaatctttttctaaagtactgtaccattcatttcaagctgttacggctctttattgcttggtttgtggttacatttatttagttgtggacatgctattgcttttttatattgtaacatgattttactttcttttcaggtcttaggagtgagcttctcccctaatggttatctggttgcaactggaagtgaagacaatttctgtcgaatatgggatttgaggactaaaagaatgttatattctataccagcacataagagtcttatctcacatgtcaagtttgaaccccaggaaggctattatttggcaacttcgtcctatgacaccaaagcagcagtatgcctaataataatgcgccatttattttatttcttttattgtctcatttctgatattcttccttccttttgcagctgtggtcagctcgtgattacaaaccaatcaagagtttggtggcccatgagtcaaaggttactagtttggatattagtggaggtaaccacttgcttaagtgccttttatctttgctgtatgtgaaattatatttggatatccttttcttgtgagaattgagatcaatagttttagccctttttatctgtccattcctcatatcaagttggacatccaccatttggttatgctaaaacaaattcccatgtatagtgcacttggattttcttagccaatatcaacactctcatctctgaactaactgcagttgttagagcagtgatgctgctaaaaacggttcaaaccaaacctatttgtctgtattacttttagaaccttatagatctatgctattctatggtgcactttcatcgtataaaattgcatatcatgcatttcccaccatttgtttgtttgtccttaatggcatacccatcttgtttctttaatcctttgttgaaaatggtatctgccagttgtacgttctgattgttctttccatctctattctccctcaacttgtttcttgcaaaatgtatcagcttttgatccttattcctaacagatgccctagtaaactctagggatcggtacattaggtggcgttgttgtctcattcttcattttccttttcaagattgtgccgtattatcatgccatccacttgccacaagattcaaacatgtcatatctgaatttctaattggtggtttgtgtaaatcttgtgcagatggacagcagattgtgactgtgtcacatgatagaacgatcaagatttggtcctgcagaagcagggcacaagataatgccatggagctggactgaggcactgaattaacttgttagaagttgtcagcatctacatgaagccatcttgtagttgtagcacctcatagcccttagcctgtgaaatgtttcatatgtaactcttctacttgacgttgtagaaaatttacgatcgaacggcttaggggcgattacccctgtcctgggtttgcatccctggttttgaagttacaatggcatggatctaattaaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0355200, RefSeq:Os03g0355200