Os03g0356470

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Revision as of 12:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0356470| Description = Conserved hypothetical protein| Version = NM_001186492.1 GI:297722114 GeneID:9270588| Length = 5240 bp| Definition ...")
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Gene Name

Os03g0356470

Description

Conserved hypothetical protein

Version

NM_001186492.1 GI:297722114 GeneID:9270588

Length

5240 bp

Definition

Oryza sativa Japonica Group Os03g0356470, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:14201049..14206288

Sequence Coding Region

14201049..14201172,14201275..14201375,14201471..14201581,14201870..14201975,14202086..14202147
,14202195..14202249,14203161..14203288,14204018..14204212,14204963..14205103
,14205200..14205328,14205471..14205674,14205791..14205905,14206092..14206288

Expression

GEO Profiles:Os03g0356470

Genome Context

<gbrowseImage1> name=NC_008396:14201049..14206288 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:14201049..14206288 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggccttcctagctccggcggcccggcccacaacgcgagccttggacctgctcgcacatggacctcctccctcttcgcccgccgcgccggcgacccctccgccgccatcgccggcttccagcgccgcctctacggaggccaccggcgccccgatgtccctctcgccggcggcagtctcgccgatagctacgccgagcgtagggttgagattcccaaaagtttcgtcatactagaagatattctgcaacacaccctgtctaatatgcacagtatccaggaaagcatactgttctggcagtccaatgctctgagaacaaattcgcagaaagcgtattttatgatctttcaaagaggtccaagggcctttgttgcaacaacatgtcaaacgctggctaaacttcagaacaaagggagtccagtccagggccttttggactctgcatcttctatgttctcaacaaaacttgccatcctaacaaggatgcaacactgcttggcttcttttcttgctgaggtttacaatgaaactgacaaacgcagaagtgtattaattagaagatcagaacaatcgctgcatagtctcttcgttgctctgaataacatcttctccaatttggaggtagaacttagaaatgctggtgagcagggggctgtattagcgaatcatgataataactcattcgaactcttccaaagattgccagaagctgatgttcagagttcagctgctataagtttgatctatgaaaaccttcagaagttagatatttttctttcctctcggctttcaagccataaaaagccgagaaaaatgaccaaatattggttaccctacacatttggagcattgggcctctctgcatttaccctatggcttttacgccacagtagcttgatgggaagttctgacattgacaactggcttcatggtgctaaaaagttgctggtttggtgttgggatgagaatgttcagaaaccagtcagttctataaggtatctcaccaatacactccatcaaagcaaaggtgtaacaggaaaacaatatatccaattccctgaagatacattaagcaaatgcaggaacatatcgtcttctctctgcgaaaggtatgagatggaaccaggatctcctgaagaattagcatgtctcatgattaatcaggtcgcttttttctcaccaactttgaaatttcagactaagaagtttttacgggattttaaagaggtaatgccggaattagaacatgttcttagggtacagcaggttactcttgcatttggtcgatggcttcttctgccggtacttctaaagccagcaagggttgtccatggtcaggttacacagagaagagatagaattgcacatcttaagcgatgtcagcttctctctggagtacaggaaatgcttgcagagtttcagtactgtatggacaagggaatgaaggaagaggcacaatgttcgcttggactattattgtacagcatttatagattttacagaggtgttgagtcgagttcaaaagaaacaggcgagtggatatatatgaaggaacacattttctgtctggcagaccctcaattgggcgtggcaatcaagcgggacattctttcgagtctacggaattataaatgcttatcaccaccatcgagtttgtatggattttag</cdnaseq>

Protein Sequence

<aaseq>MGLPSSGGPAHNASLGPARTWTSSLFARRAGDPSAAIAGFQRRL YGGHRRPDVPLAGGSLADSYAERRVEIPKSFVILEDILQHTLSNMHSIQESILFWQSN ALRTNSQKAYFMIFQRGPRAFVATTCQTLAKLQNKGSPVQGLLDSASSMFSTKLAILT RMQHCLASFLAEVYNETDKRRSVLIRRSEQSLHSLFVALNNIFSNLEVELRNAGEQGA VLANHDNNSFELFQRLPEADVQSSAAISLIYENLQKLDIFLSSRLSSHKKPRKMTKYW LPYTFGALGLSAFTLWLLRHSSLMGSSDIDNWLHGAKKLLVWCWDENVQKPVSSIRYL TNTLHQSKGVTGKQYIQFPEDTLSKCRNISSSLCERYEMEPGSPEELACLMINQVAFF SPTLKFQTKKFLRDFKEVMPELEHVLRVQQVTLAFGRWLLLPVLLKPARVVHGQVTQR RDRIAHLKRCQLLSGVQEMLAEFQYCMDKGMKEEAQCSLGLLLYSIYRFYRGVESSSK ETGEWIYMKEHIFCLADPQLGVAIKRDILSSLRNYKCLSPPSSLYGF</aaseq>

Gene Sequence

<dnaseqindica>5117..5240#4914..5014#4708..4818#4314..4419#4142..4203#4040..4094#3001..3128#2077..2271#1186..1326#961..1089#615..818#384..498#1..197#atgggccttcctagctccggcggcccggcccacaacgcgagccttggacctgctcgcacatggacctcctccctcttcgcccgccgcgccggcgacccctccgccgccatcgccggcttccagcgccgcctctacggaggccaccggcgccccgatgtccctctcgccggcggcagtctcgccgatagctacgccgagtgagaaaccccctccgaaaattatatgttagcgaatttatttgattgatcgatctatctgtttatatgtggcattgatgtgatgatcaggccttgatgagattagggcctttatatattaattaatctgtttctgtggcatcgatgccttttcttttttctttttaattattatgttatttgcaggcgtagggttgagattcccaaaagtttcgtcatactagaagatattctgcaacacaccctgtctaatatgcacagtatccaggaaagcatactgttctggcagtccaatgctctggtatttttacgccgcaaaccctttcttttcctagactcccagtatttagatatgattcttgcatttatctatctgccatttacctatacttggaattgtttctcttttcttttcagagaacaaattcgcagaaagcgtattttatgatctttcaaagaggtccaagggcctttgttgcaacaacatgtcaaacgctggctaaacttcagaacaaagggagtccagtccagggccttttggactctgcatcttctatgttctcaacaaaacttgccatcctaacaaggatgcaacactgcttggcttcttttcttgctgaggtttgtttactaaaataccaatattaaaaagcttttttcaaagtcctggtctcttcccaaaaactgaggcatggtcagcttcaaagccagctgttggtatggcatatatgaacttaaattctacctttgcttttttccataggtttacaatgaaactgacaaacgcagaagtgtattaattagaagatcagaacaatcgctgcatagtctcttcgttgctctgaataacatcttctccaatttggaggtagaacttagaaatgctggtgaggtatgaaatgtttttttctttttaacttaattcgagattctaggtgtaaatctttctttgttgttttctaatatggtctcggtttttcttttccagcagggggctgtattagcgaatcatgataataactcattcgaactcttccaaagattgccagaagctgatgttcagagttcagctgctataagtttgatctatgaaaaccttcagaagttagatatttttctttcctctcgggtttgcaactccccccctactacactttcacacgtgatttttttttcacttgtcagcctcgcagttcccagattactgttacctgtattttaattgggacattaaggctgtgttcatttggattaatatgattatttcaagcaactttcctatagttttttttgttgcaaaaagtatattatttaacagtttgagaagcgtgtgtacggaaaataagaaagccaaagttggtaagggggagaaatgaacgcaccctaaggattcaatgttgtacccaagtttttttggctactagtttgtgcttttagtcgaaactcaaaaaagtatttttaggcatatgcaagtaaaccaaaaactgttccatacatgaatggtttcaaatgagaaatcagtgctactgctaattattctaaagtaccaaaaacatttttgggtgattacggaaaatctcccacttgaggcatcaaaatcaactaattaatcatgtggataattgacaaagtgttaaatcttgtacatcaatatcagatttagtagtctagcaatcctttttacataattcacctatttattttattttttatgttagaaaactatatgtgggtcttgtactcttgttcatctcacaaaagtagatcttccggtgcagttcttagaagatatctatatgttgcttataatttcattatgccaagaaatgtgttgcttatttatctgaattctgaagcaagtaattttatgcaatgatagctttcaagccataaaaagccgagaaaaatgaccaaatattggttaccctacacatttggagcattgggcctctctgcatttaccctatggcttttacgccacagtagcttgatgggaagttctgacattgacaactggcttcatggtgctaaaaagttgctggtttggtgttgggatgagaatgttcagaaaccagtaagatactctatctatattctattttttttatttattttgtgcacaatggtagtgcaaattactccctttgtttttaaatattcaaactttcaaaggtttaactggatcttgtccaaaaatcaagtgtttgtgaccggagagagtggttggttggattcgcagtcagttactcccttcgtttttttgataaatgacgatcaaacgtttgtccaaaaatcaatagcgccgtgtattaaaaaacggagggagtaactgattgtgaatccaactactctctccggtaaccaatacttgatgttttttggacaagatctggtcaaaccttgaaaccttttaaaatagtaattagttttaaaacataagattgatttgtgtagatttgtcttcaaaagtattttcacaatcacagttctaaatttctaaaaataaattgtgtctaagtcacacctcgaagaccatgaaagaaaaatgtcaatgtcatgcactttttactgaaagaaaaaaaaagatcattctctagttatctcaaacggttcatttaattttcatgtgtaaccactaaattttggaagtgttgctacaacaagctcgtccaagtttccatatatttatccactatcaagatgaacataatgatctgtctagttgttcgaatttggaaattagtactttctgttgtgtcactgaccgcacgcatgacacgttttttctattatggatctttaggtcagttctataaggtatctcaccaatacactccatcaaagcaaaggtgtaacaggaaaacaatatatccaattccctgaagatacattaagcaaatgcaggaacatatcgtcttctctctgcgaaaggtaatacctggtttacatttgagtttctgattgaaaataaaataataaaatgttcccttaaggggttatgagaaatccctatgcaggggcggatccaggatcaaaaaaattgggggggactcaattacacagtttcttcaacctccagccatctaaggacctttagattaccattcatggtgaaaaaattaaaggaggtgctcggggggtatccatgggtcttgtgggtgtagggagtcccccctacacccacgttggatccgcccctgtccctatgtgtaatggcatattaatacataagacttgaaaaggttttctggtggtcaatagagtccctggtagtcactttgtagtcaatagagtcccatttctagaattggttatctttatagaagttaaatttcaaaatcgattcaactcaatatttaaagtagaaaatttccaaatggacttgatgtcaatatttgccgaaaatcaattcaaaatcaatctttctttatcgtgcatagcaatttgcagtttcatcttgtagaattcttatttgacattacagttttgagttatttgagaacctgtttgaaccattgagtgtcatggttgctgaatccactttctaataatgtacacaaggcagttaggaatagacctttatagcgtatctcgtatcgtacgtccatgaagctatatgtcaaattttgatccaaataatgtcactatctaatcactaattaggatggcattcaattgcaataccatctgccggagaataattatgatatgtacacgttatttagctattccgaattactctattttgggtgatcctcgaacaattgttctctctatcgtgctcaattgaaaatgtgagtatgtttgatcattcagctatattctatgcatattaagtgcaggtatgagatggaaccaggatctcctgaagaattagcatgtctcatgattaatcaggttattttccttccttgtgtacatatatttgcatttaataaattcaggtcgcttttttctcaccaactttgaaatttcagactaagaagtttttacgggattttaaagagtaagttaaactattcatgtctgacaaatatatattggtaaaaacacacagaaaactcttatctagtataagtattcaccagctgagtttgttggattgttcttgcacagggtaatgccggaattagaacatgttcttagggtacagcaggttactcttgcatttggtcgatggcttcttctgccggtacttctaaagccagcaagggttgtccatgtacgtttattccaatgtttaccttcttctcaatatcacttgcctaagtagtgtattatctccgtcccaaaataaactaacctagacgacgatgtaacatatcatagtctagctatctatatttattgtattaggatgtattatattatctttgagatttgtttattttgagacaggcctcagtatgttctactctattatctgtgtgcctggcatctgttgtgaaaggagtacaagtgttaccaggcttaacatataactgttgacctctggttatctatacaacagggtcaggttacacagagaagagatagaattgcacatcttaagcgatgtcagcttctctctggagtacaggaaatgcttgcagagtttcagtactgtatggacaagggaatggtaatttatctatatctaaaattagtctattaagatccagaatttatattataactacgattattccctgaggatctactttatttcctttacagaaggaagaggcacaatgttcgcttggactattattgtacagcatttatagattttacagaggtgttgagtcgagttcaaaagaaacaggcgagtggatatagtaagtcgcaagtgatcttgactaaatatttaaaatattcctttctatccttgattgcctaggaacccttactatcctggattcaaatgttttttattgcagtatgaaggaacacattttctgtctggcagaccctcaattgggcgtggcaatcaagcgggacattctttcgagtctacggaattataaatgcttatcaccaccatcgagtttgtatggattttag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0356470, RefSeq:Os03g0356470