Os03g0356582

From RiceWiki
Revision as of 12:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0356582| Description = Similar to AtPIP5K1| Version = NM_001186495.1 GI:297722120 GeneID:9267438| Length = 4472 bp| Definition = Oryza sat...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0356582

Description

Similar to AtPIP5K1

Version

NM_001186495.1 GI:297722120 GeneID:9267438

Length

4472 bp

Definition

Oryza sativa Japonica Group Os03g0356582, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:14263272..14267743

Sequence Coding Region

14263408..14264573,14265274..14265438,14265537..14265702,14265796..14265912,14266008..14266201
,14266294..14266376,14266446..14266530,14267014..14267305

Expression

GEO Profiles:Os03g0356582

Genome Context

<gbrowseImage1> name=NC_008396:14263272..14267743 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:14263272..14267743 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcgagcacgaacggcgtgggcgagggagaggaggaggaggaggaggacgcgtgtcaccgatgccccccggcgaggacgccgacacggcgtcgtcctgcagcggtgccgacgaaggcgaggcgcaggcgcaggcgcaggggaatgagcagcagcgcgcggagcgggtgctccccaatggggacctgtacacggggcagtggcgcggcggctcgccgcacggcgccgggaagtacctgtgggcggacgggtgcatgtacgagggggagtggcggcgggggaaggcgaccgggcgggggaggttctcgtggccgtcgggcgccacctacgagggggagttcctcgacggcttcatgcacggcgccggcgcctacgtgggcgccgcgggggacacctaccgcggcgcctgggccaagaacctcgagcacggcgccggcgagaagcgctacgccaacggcgactgctacgacggcgagtggcgcgcgggcctcccggagggctgcggccgctacgcgtggcgcgacggcaccgagtacgccggcggctggcgcgcgggcctcatccacggccgcggcgccctcgtctgggccaacggcaaccgctacgacggcgggtgggagggcggccgcccccgcggccagggcaccttccgctggtccgacggcagcctctacgtcggcttctggggccgcgaggcccccggcggcgccgtccaccagaagggcgtctactacccgtccccggcggcggcgggcgagtcccgcgaccccagggaggtgttcgcgcgggagctccccgagtgcgtccgctccagcacggaagggcagtcggcgctgccgtcgctgcgttcgctgaggtggctggcgcggtcgatcagcggccgcgggagctcgtcgtcgggccggagcatcggctccgtggtgggcgtgccgcacctctggggctccgacggcgaggtcaagcccgacattgccgacgactggaggcgccggagcagcgtcagggaggggaggggaccgccgccgccttcgctggcggcgccgccgccgccgccgcacgtcgacaagggggcggcgccgccgcgggtgatgaagcggcagggggtgaccatcgccaagggccacaagaactacgagctcatgctcaacctgcagctcgggatcaggcatgcagtaggaaggcaaggccaggttatattagacctgaagtcatcagcatttgacgcaaaagaaaaagtatggactaaattccctccagaaggctcaaaatacacccctccacacaattcttctgatttcagatggaaggattactgcccaaaggtgttccggacattgcgcaagctgtttaaggttgatccagctgactatatgctatccctttgtggagatgatgctctccgtgaactctcgtcccctggtaaaagtggaagcttcttttacttgacaaatgacgaccgctacatgataaagacaatgaagaaatctgaagtaaagatgcttctgaagatgcttccagcttactacaatcatgttcgggcattcgaggataccctggtgacaaagttttttggcctacattgtgtaaagttggctggagcaaatcagaagaaggttcgtttcgtcataatgggaaatcttttctgctctgatcacactattcataggcgatttgatctgaaaggatcatctcttggccgtacaactaacaagccactggcagaaattgatgagtatacaactctgaaagatcttgatcttaatttcatctttcggttgcaaaaacaatggttccaagagttccaaagcaggcaagtagacaaggactgtgaatttcttgagcatgagaagatcatggattacagtcttttagtgggtgtacattttagaggtgccgttgatattgatggtgacatacctgcatcaccacgcctttcaagatgggacagggatcactttctttctgacccaaacaggtggtcgaagattaaacttggggcaaacatgctgtcaagggctgaactgacaatcagaaagaatgacactgatgtcgttggacagccaaccgggcagtactgcgacgtgatattatattttgggataatagacatacttcaagactatgatatcggcaaaaagatcgagcatgcttacaagtcttttcaatacgactcgacatccatctcagcagtagacccaagacagtattccaggcgcttcagagatttcatatacaacgcgttccaagaagatcgagcagagagctga</cdnaseq>

Protein Sequence

<aaseq>MREHERRGRGRGGGGGGRVSPMPPGEDADTASSCSGADEGEAQA QAQGNEQQRAERVLPNGDLYTGQWRGGSPHGAGKYLWADGCMYEGEWRRGKATGRGRF SWPSGATYEGEFLDGFMHGAGAYVGAAGDTYRGAWAKNLEHGAGEKRYANGDCYDGEW RAGLPEGCGRYAWRDGTEYAGGWRAGLIHGRGALVWANGNRYDGGWEGGRPRGQGTFR WSDGSLYVGFWGREAPGGAVHQKGVYYPSPAAAGESRDPREVFARELPECVRSSTEGQ SALPSLRSLRWLARSISGRGSSSSGRSIGSVVGVPHLWGSDGEVKPDIADDWRRRSSV REGRGPPPPSLAAPPPPPHVDKGAAPPRVMKRQGVTIAKGHKNYELMLNLQLGIRHAV GRQGQVILDLKSSAFDAKEKVWTKFPPEGSKYTPPHNSSDFRWKDYCPKVFRTLRKLF KVDPADYMLSLCGDDALRELSSPGKSGSFFYLTNDDRYMIKTMKKSEVKMLLKMLPAY YNHVRAFEDTLVTKFFGLHCVKLAGANQKKVRFVIMGNLFCSDHTIHRRFDLKGSSLG RTTNKPLAEIDEYTTLKDLDLNFIFRLQKQWFQEFQSRQVDKDCEFLEHEKIMDYSLL VGVHFRGAVDIDGDIPASPRLSRWDRDHFLSDPNRWSKIKLGANMLSRAELTIRKNDT DVVGQPTGQYCDVILYFGIIDILQDYDIGKKIEHAYKSFQYDSTSISAVDPRQYSRRF RDFIYNAFQEDRAES</aaseq>

Gene Sequence

<dnaseqindica>137..1302#2003..2167#2266..2431#2525..2641#2737..2930#3023..3105#3175..3259#3743..4034#accgactcccgagacaatgccgccgcggcgcgcgcgggcgcgcggcggcagcagcagccggcgccgctgctagatcccacgttcgccgcgcgcgcgcgcgggcggcctcgccgtggggctcgaggcgacgcgaccaatgcgcgagcacgaacggcgtgggcgagggagaggaggaggaggaggaggacgcgtgtcaccgatgccccccggcgaggacgccgacacggcgtcgtcctgcagcggtgccgacgaaggcgaggcgcaggcgcaggcgcaggggaatgagcagcagcgcgcggagcgggtgctccccaatggggacctgtacacggggcagtggcgcggcggctcgccgcacggcgccgggaagtacctgtgggcggacgggtgcatgtacgagggggagtggcggcgggggaaggcgaccgggcgggggaggttctcgtggccgtcgggcgccacctacgagggggagttcctcgacggcttcatgcacggcgccggcgcctacgtgggcgccgcgggggacacctaccgcggcgcctgggccaagaacctcgagcacggcgccggcgagaagcgctacgccaacggcgactgctacgacggcgagtggcgcgcgggcctcccggagggctgcggccgctacgcgtggcgcgacggcaccgagtacgccggcggctggcgcgcgggcctcatccacggccgcggcgccctcgtctgggccaacggcaaccgctacgacggcgggtgggagggcggccgcccccgcggccagggcaccttccgctggtccgacggcagcctctacgtcggcttctggggccgcgaggcccccggcggcgccgtccaccagaagggcgtctactacccgtccccggcggcggcgggcgagtcccgcgaccccagggaggtgttcgcgcgggagctccccgagtgcgtccgctccagcacggaagggcagtcggcgctgccgtcgctgcgttcgctgaggtggctggcgcggtcgatcagcggccgcgggagctcgtcgtcgggccggagcatcggctccgtggtgggcgtgccgcacctctggggctccgacggcgaggtcaagcccgacattgccgacgactggaggcgccggagcagcgtcagggaggggaggggaccgccgccgccttcgctggcggcgccgccgccgccgccgcacgtcgacaagggggcggcgccgccgcgggtgatgaagcggcagggggtgaccatcgccaagggccacaagaactacgagctcatgctcaacctgcagctcgggatcaggtgcgtgtgtttctttcccgcgattttctgtctctttgattgcactcgcaatacttcaatttgtttccatgcgaggaatttaaaaatgtgaaattaggaaatctcgcatgaacaatcatgttgtcatctcgtcggtaaacaacgaaatgggaattttgggcgaaatattaggggtgtgcattgaagcatttatctagaatggacaaacattttcagcgacaaaattcatatgcgttggtagtgtggacatcaagaaagaatccgaggccttgcatgtaaagtagtaatgatttgagcacaattcgatgacttggctgaggcatttttgtggactcttatggcattcttatcatcttaacactgcctcactagtccttctatcagtagtttgaaatcctgaaaatgaaatcatatatcatagactccatagacagtactcttacaaagttataaaatgaaattcttatagttcattatcaacgattaatcatgtaaggattatcattgaattttctccattaccaatctttgtgtttacaacatattttactttagaaaccaagattgttattgttttttcagaacttgtagcacttccatatcttttgagaagatgtaattattcgacagtaagattgccatatttctttgtaagctcagaaagtaacttattatcactgagtatgcttattgtacataggcatgcagtaggaaggcaaggccaggttatattagacctgaagtcatcagcatttgacgcaaaagaaaaagtatggactaaattccctccagaaggctcaaaatacacccctccacacaattcttctgatttcagatggaaggattactgcccaaaggtgttccggttggttatcactcccatgatagatacattatagattagtgactgttttatggcttcatccatgtcaacatgcacatttgttctttacaaaatcacaggacattgcgcaagctgtttaaggttgatccagctgactatatgctatccctttgtggagatgatgctctccgtgaactctcgtcccctggtaaaagtggaagcttcttttacttgacaaatgacgaccgctacatgataaagacaatgaagaaatctgaagtaaaggttgtcctttgctgtctttgttcaaatagcaccatttaagcttctatatttagaagttctattctgaatacatggacaaactttgccacacagatgcttctgaagatgcttccagcttactacaatcatgttcgggcattcgaggataccctggtgacaaagttttttggcctacattgtgtaaagttggctggagcaaatcagaagaaggttagaacaatatatgattatccactccgccctcatgaatatgctatttttcaagcataatatgcctgattgtttgctgctgtactactacctaggttcgtttcgtcataatgggaaatcttttctgctctgatcacactattcataggcgatttgatctgaaaggatcatctcttggccgtacaactaacaagccactggcagaaattgatgagtatacaactctgaaagatcttgatcttaatttcatctttcggttgcaaaaacaatggttccaagagttccaaaggtgctaagtgatacccatacaccttagtgcctaatttctgtataaccatgctatctatcccttgtgctaatgaatttttaaatattttgaagcaggcaagtagacaaggactgtgaatttcttgagcatgagaagatcatggattacagtcttttagtgggtgtacattttagaggtaagaaagtgtgcttctgacaatagtttgcacaatcttaaggctgacttatttaccttggttaaaaaggtgccgttgatattgatggtgacatacctgcatcaccacgcctttcaagatgggacagggatcactttctttctgacccaaacaggtaaccgagatatggagtactaaattattcctctctcagctatactgcaatcctagttttagttagttttcctcgttcaaaatcatttagttagtatgtatgtagtggagaaccctactcattgatagtttgattcatgctatagccgtcttagtttggtaactaatgatttttaccagtaattttgttatgaaaaggctttaggtaaccttctgcttatccattttaaatatacaagttcactgtagtattctgttgggggtattcattctccggagtagaaagtattttaggtatattatctcactttctgtaatttcttggtaaattgtatttgttatgtaaatgccaagaaatgtaaatcctccaagtatcaaacagatggtgcaactgttcattgcaattgtccaaatggaattttttatgccctatgtatatttgaaaatgctacattataaagtaattcaacaaatctgacttcaggtggtcgaagattaaacttggggcaaacatgctgtcaagggctgaactgacaatcagaaagaatgacactgatgtcgttggacagccaaccgggcagtactgcgacgtgatattatattttgggataatagacatacttcaagactatgatatcggcaaaaagatcgagcatgcttacaagtcttttcaatacgactcgacatccatctcagcagtagacccaagacagtattccaggcgcttcagagatttcatatacaacgcgttccaagaagatcgagcagagagctgaaagtttatctgacaaaatgtagctccaaagtgaggactttgcaaaggccaaagatcaagcacagcgcaggacagcacggcgctacacaagctcgcatattcgattgcctgcaccaaactggtcatctggaattcggctgtttttgtagaaggtatcagtagttgctggagcaccattcaggctgctggttcctcgccttccaggaatcgggattgactttcctgtaaatatgagtagctacgtacatatacacggagttcactaatatttacaagagtagatgtaacatacagattcaaaattacacatagaaacatgtaaaccacgggtgcacaagccagtcagaggttgtaaaatgtaaatgctcctttgcctgaggagatcattctttcatgtactgaaaacctttgacatattggaaggaatttttttctgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0356582, RefSeq:Os03g0356582