Os03g0356900

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Revision as of 12:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0356900| Description = contains InterPro domain(s): IPR002627, IPR011593| Version = NM_001056676.2 GI:297600940 GeneID:4332870| Length = 34...")
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Gene Name

Os03g0356900

Description

contains InterPro domain(s): IPR002627, IPR011593

Version

NM_001056676.2 GI:297600940 GeneID:4332870

Length

3401 bp

Definition

Oryza sativa Japonica Group Os03g0356900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:14347253..14350653

Sequence Coding Region

14349473..14350450

Expression

GEO Profiles:Os03g0356900

Genome Context

<gbrowseImage1> name=NC_008396:14347253..14350653 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:14347253..14350653 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtaccacgtcggcggtgtcatcggacagtcacccaagcccaaggtcgtcttcgtgctcggcgccaccgccaccggcaagtccaagctcgccatctccatcgccgagcggttcggcggcgaggtgatcaactccgacaagatccaggtgcacgacgggttccccatcatcacgaacaaggtcaccgaggaggagcgcgccggcgtcccccaccacctcctcggcgtcctccacccggacgccgacttcaccgccgaggacttccggcgcgaggcggccgccgccgtcgcccgcgtcctcgcggcgggccgcctccccgtcgtggccggcgggtcgaacacctacgtcgaggcgctggtggagggcggcggcggcgcgttccgcgcggcgcacgactgcctcttcctgtggaccgacgtcgcgccgggcctgctgcggtggtacaccgcggcgcgcgtggacgacatggtgcggcgcgggctggtgggcgaggcgcgcgccgggttcgtcgacggcgccggcgccgcggactactacacccgcggcgtgcgccgcgccatcgggatcccggagatgcacgggtacctcctggccgagcgctcgggcggcgaggcggccgacgacggcgagctcgccgccatgctcgacggcgccgtgcgcgagatcaaggccaacacctaccgcctcgccgcgacgcaggtggcgaagatccggcggctgagcgcgctggacgggtgggacgtgcggcgcgtggacgcgacggtggtggtggcgcgcatggcggagggggcgccgcacagggagacgtgggaggcggtggtgtggaagccgtgcgaggagatggtcggccgcttcctcgaggcgtccgccgccgtggatgacgatgacaatgccgccgccggttcgccggcggcgttggcaccgatgacggcggcgtgtcgcctgagggcgcagctggtgcagctgcaatactaa</cdnaseq>

Protein Sequence

<aaseq>MEYHVGGVIGQSPKPKVVFVLGATATGKSKLAISIAERFGGEVI NSDKIQVHDGFPIITNKVTEEERAGVPHHLLGVLHPDADFTAEDFRREAAAAVARVLA AGRLPVVAGGSNTYVEALVEGGGGAFRAAHDCLFLWTDVAPGLLRWYTAARVDDMVRR GLVGEARAGFVDGAGAADYYTRGVRRAIGIPEMHGYLLAERSGGEAADDGELAAMLDG AVREIKANTYRLAATQVAKIRRLSALDGWDVRRVDATVVVARMAEGAPHRETWEAVVW KPCEEMVGRFLEASAAVDDDDNAAAGSPAALAPMTAACRLRAQLVQLQY</aaseq>

Gene Sequence

<dnaseqindica>2221..3198#tcgtcggaataaacctcacccctgtacaactccggccaccgattccggcgaccaagttggtacttgataaactccggcagctatcgattccgttccggcggccggctagcagctagctctgtggtcgatctcctcgcggtaggtgttaccctcttggttaatcaccgtccatttttcgtaatccagcttgaactgataagatgagtatagatgctttttgcttgcaaggttttgtgtcgcaatgctagtttctttttcttttttcttgttaatatccatttttctttttcttttatcaaaaaaaatatgtgggtgtaggggtggatctaggggggaaaaaagcaggggctaaaaaaaactagacaaagctccaacttatttttggcctttctgtatctatgtcggaaaattttggaggctcaagggtctctaataatccatatattagtagcgggcgctcaaaccccgtctccgtgatagatccatatatatgggtggtttttgtttgatctaaaaagatttttttttctttgtaatccttatgttgagcgatagatattttatttttatgtaagatatattagatatctaagttgaggctttttttaagggctaatatttttcattcacatagatctcaatgttattataatttttccatgtcatatataaacttaagaccgaactaatgcatcttgtttttacctttgacttttcattacttttcaataggacctaaaagggattagggagtcctaattgccctaggctttgtctttaccccttgtatgatgtgaacaccagacataggttcaataggaatgaatagtttgcggatacatatgagataatgttttgcgctatatgtcaaagttagaaggtggtgaacataaaacaaagttaaagtttcactgaataataactagcgacgatgaacataaagaaattattgaagtttaccctcaagaagtagtaatattaatgattgattttgttaattttgctagctagaatatgcatacaacagcagatgttatcatcctttttatttatacgtactgtcatccttttctcctttggtatagattggttttatgaagttgatggaaaattgaccacagatgagtttattattcattcatgaaccgtgaacttctcttaaaaaaagtaaaataaggaagttcaatgcgaataatctatatgggggattaattacttgtcaatgcttttcatgatatttaatgttttcgactgtaagattaacaaattgtgcagagatgtatttttcatgcatgataatttggaagtgcacccacattgttccatgaacttgcattgctagttttatgttaaattctcgttcacaacaaattaactagagacaattaattatcatgatatataggtaatttagcatcaaactgatcatttacaatcagcattactgtttttgaaaacaaaaaaaataaaaaaaaatgctatatcgttacaacggtggtttattttactaacatcatcatgacatcagcatgggatctaggtaccaaatactgttacctatgagtatcatgtatgataccccgatattagatatggttcctatgtttatcatgtctaatgctagtatcatataagtaccaaatttgtgccatgctggcgttatggtgatgccagaaataaagtattccattctggaatggtatagtgtcttctggtaatccttatttagaaaatgtattataaccatttaaatatagtatatgttccccttccatctcaaaatgtaaatgattttgggtagatgtaatctatagtccttaaaatgttagtagttctggtggtgtccattcccacaccatctctactactaccgtgtgagccccacaatctataccattacattatcttttaacgagtcctcccccgtttcaccgttggctctcagtacttggactaaataagtgtttgttaattgatttaataaattagaaactcaatttgttgtccgttacaaagcacaagctcttagctatcctaatattattaatctgaacaaacttatatcacatccatctaaaatctcgtatattatattttgggacgggggagtaagaatgatcgagtgcacgtacattttaggtcgtaaatttactatctttgcaaaaagtaattaacgatggcttatatacctcttctccggtgagcagctcaccttcatcaatggagtaccacgtcggcggtgtcatcggacagtcacccaagcccaaggtcgtcttcgtgctcggcgccaccgccaccggcaagtccaagctcgccatctccatcgccgagcggttcggcggcgaggtgatcaactccgacaagatccaggtgcacgacgggttccccatcatcacgaacaaggtcaccgaggaggagcgcgccggcgtcccccaccacctcctcggcgtcctccacccggacgccgacttcaccgccgaggacttccggcgcgaggcggccgccgccgtcgcccgcgtcctcgcggcgggccgcctccccgtcgtggccggcgggtcgaacacctacgtcgaggcgctggtggagggcggcggcggcgcgttccgcgcggcgcacgactgcctcttcctgtggaccgacgtcgcgccgggcctgctgcggtggtacaccgcggcgcgcgtggacgacatggtgcggcgcgggctggtgggcgaggcgcgcgccgggttcgtcgacggcgccggcgccgcggactactacacccgcggcgtgcgccgcgccatcgggatcccggagatgcacgggtacctcctggccgagcgctcgggcggcgaggcggccgacgacggcgagctcgccgccatgctcgacggcgccgtgcgcgagatcaaggccaacacctaccgcctcgccgcgacgcaggtggcgaagatccggcggctgagcgcgctggacgggtgggacgtgcggcgcgtggacgcgacggtggtggtggcgcgcatggcggagggggcgccgcacagggagacgtgggaggcggtggtgtggaagccgtgcgaggagatggtcggccgcttcctcgaggcgtccgccgccgtggatgacgatgacaatgccgccgccggttcgccggcggcgttggcaccgatgacggcggcgtgtcgcctgagggcgcagctggtgcagctgcaatactaattagaatggagtggcttggcgttggctagcgttagtgctactactataattaatatatatagtgcaagcagatcgcgtttgattagagtgacaattatatgtcgtcgaaagtacgttttgtgatggaagtaacatcatccagtcactataagtgggacccatatgtcatcagtttaattaaagagatgattttttttgcgggg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0356900, RefSeq:Os03g0356900