Os03g0359700

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Revision as of 12:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0359700| Description = Armadillo-like helical domain containing protein| Version = NM_001056687.1 GI:115453102 GeneID:4332884| Length = 641...")
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Gene Name

Os03g0359700

Description

Armadillo-like helical domain containing protein

Version

NM_001056687.1 GI:115453102 GeneID:4332884

Length

6416 bp

Definition

Oryza sativa Japonica Group Os03g0359700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:14526000..14532415

Sequence Coding Region

14526083..14526193,14526845..14527009,14527088..14527206,14527505..14527579,14530525..14530618
,14530719..14530778,14531033..14531098,14531173..14531271,14531609..14531653
,14531881..14531983,14532147..14532220

Expression

GEO Profiles:Os03g0359700

Genome Context

<gbrowseImage1> name=NC_008396:14526000..14532415 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:14526000..14532415 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccttcttcttccgcatggcgtcgcggctgcggccgtcgacgccggaggaggtggtccgctccatcaaggactccttccaggccctccacaccaagaacggcgccagggctctagaagaggttgagaaaaacctctcgtcattgaggcaaatgctgtctggtgatggagaagcagaaccaaatcaagaacaagtcttgcaaataacccttgagatttgcaaggaggatgtcctttccctctttgttcagaatctgccttcgcttggttggggagtacgaaaagatctggttcactgctggtgcattttgctcaggcagaagtttgatgagagctactgctgtgtgaagtacattgagaaccatctggagcttttagatttcctagttggctgctacaagaacttggacgttgcactgaattgcgggaacatgttgagagaatgcataaaatacccaacacttacaaaatacatattggattccagtagcttcgaactgttttttgagtatgtggagctgccaaacttcgatattgcttctgatgctctgaacaccttcaaggatctgcttaccaaacatgaaacagttgttgctgagttcttgagttcccactacgagcagttctttgaactctacacaaggctcttaacatcacctaattatgtaacaagaagacaatcagtgaagttcctttcggaatttctgttggaggctccaaacgctcgaataatgaagcgttatattacggaagttcgtttcttaaatattatgattactctactgaaggattcaagcaaaaatatcagaatatgcgccttccatgtttttaaggtttttgttgccaatccgaacaagcctcgcagtatcatcgaggctttgatcgaaaatcgcagagaactgctgaagctactccaaaatcttcctacaagtaaaggcgaagatgaacttgatgaggagaggaatctaatcattcaggggattcagaagctggcctgctcatcagcatag</cdnaseq>

Protein Sequence

<aaseq>MSFFFRMASRLRPSTPEEVVRSIKDSFQALHTKNGARALEEVEK NLSSLRQMLSGDGEAEPNQEQVLQITLEICKEDVLSLFVQNLPSLGWGVRKDLVHCWC ILLRQKFDESYCCVKYIENHLELLDFLVGCYKNLDVALNCGNMLRECIKYPTLTKYIL DSSSFELFFEYVELPNFDIASDALNTFKDLLTKHETVVAEFLSSHYEQFFELYTRLLT SPNYVTRRQSVKFLSEFLLEAPNARIMKRYITEVRFLNIMITLLKDSSKNIRICAFHV FKVFVANPNKPRSIIEALIENRRELLKLLQNLPTSKGEDELDEERNLIIQGIQKLACS SA</aaseq>

Gene Sequence

<dnaseqindica>84..194#846..1010#1089..1207#1506..1580#4526..4619#4720..4779#5034..5099#5174..5272#5610..5654#5882..5984#6148..6221#acccgcgatagcatagcaacaccgtaattccgttccgttccgttccgttccgtcgccccccccggccggcgagggcgagggcgatgtccttcttcttccgcatggcgtcgcggctgcggccgtcgacgccggaggaggtggtccgctccatcaaggactccttccaggccctccacaccaagaacggcgccagggtaaaaatcccccttctcctctcctctcttctcctctgtttttcctcttctcttcttggcccgccgctcgccgccgcgtccgacgatcaaggcaggggatccgtgcgtgcccgatcccggattagcccccttcatcacgcatgcagctggaggtagatcaaaaccggcgatcttgctgcccgttggtcggatggtaaagacttttctttcctcggcgtgaggatcatttcttcgtaattgaggggcacctgagccttttagcggtgagattgctcattgcggcctattgttggcgagattatctctgggcatgtcagtatatgtttaagtggggagatgcagcgttattcattgtaattctcgaaccaaaggtttcagcaaacctggtgataatagtacgagttccttttttgtgctttttttttaagtcttgtggttgtggcagaatgtgtaattgtgtattatttcggtagattgttcaatggtccagaaaccagtgaattttagatcaggatgattgtaaggtttgctgtgctcagtcatgtcatgatattgttcatcatgtttgttcactctattgtgaagatttcttgtactgctgtacatagtttgaaattccgaatgcatcctgattcacttttttaacattaggctctagaagaggttgagaaaaacctctcgtcattgaggcaaatgctgtctggtgatggagaagcagaaccaaatcaagaacaagtcttgcaaataacccttgagatttgcaaggaggatgtcctttccctctttgttcagaatctgccttcgcttggttggggagtaagtgttttatcacttaaaatctgtttgcattctccatttaaccagcctgttgaaatcgttagctctgaattgcaggtacgaaaagatctggttcactgctggtgcattttgctcaggcagaagtttgatgagagctactgctgtgtgaagtacattgagaaccatctggagcttttagatttcctagttggctggtaacacatcaatttcttgacttaatatcacagataatctttcgaacttctagtacaattctgtagtaataacatgatcgttcagatatttacaggatattgactactcacggcctttagtcagtcagttgtcacattttctcctttataaacttttgtaattgttggttattgctttagccatagcgtacattcaaagtgtcctgcactttggagcctagcttgtggtttcttggtcattttctgcctacagtgtatcttttgaaggataattataattgatcaactcttgtgacagctacaagaacttggacgttgcactgaattgcgggaacatgttgagagaatgcataaaatacccaacacttacaaagtaagggtttaaagtttccattcagttgggacattattctgtcttgcaattttactaacattatcgtgcctgcctttattttacatgatatgtggttaatcctatataaatgtctaaggtatgatattaaatgaacaagtgcttgaactgttgatttttctttcgtttgctacgaactctctggttttaaatgacaatgaaacataaaaatggcttattatttaatggcagtaatcatgaaaaacagaattctaacatcatgaaagtgatttcctatgtttgtgcctgctactaaaaaaccactgttgcaccttatgcattgttaatttgttatataatatttatgttactagacatgtctttgtttcttcaatagtattattatattggtaggctaatgtttcttcaccagaattataagtctgtcaccacttaacgtttcaaagaagctttgcacgctcacatccttccgatttttttatttataagaactaatccttcacaaattaaataagtagtaattatctgtagggatttaccaaagtagtaaggatgctattgtcatcagcgtccaggtgtggacgctgttagaatacacgtccagctcgggacgcacttcctaacagcgtccacagtctggtgcgacccaatgtgccttaccacgccggccactgcaagtgcttgttgacatctcctgctagcgagccttcgtgttgtcctaagcaacgttagctcgatcactttgttggcgattgagcatgtttaattacttaattatatgctatcactgcctttgaagtgcccacgcatgcgttagctttttctttatctggtccggctgcctctaaaacagatatatagcttgttgttggatcaatcaatttgtagttatatataggtatgtcgattcattttaatagcgctgcacatcgtatcaacgtaatatggttctagataaattatactcatatatttcaataatctagccaactgtgtcaattacaaagacaggacaaacaatctggatagatacaatgcgttcttgcatcaaccaggcaaacaaaacgattcaaaccaagtatatatccggacactagataagttcttatacatacgaagaaacatccacaatctaaaaaagctcacttaaatatataagctagttgcactgtgcttcttgaaacttttcttggcactcaactacttgtgttgaacttcccgaaaacgtaaatcaaacgaaaatgttagttttaccaagatgaagtaaggcagctagctgattctcacagagttactgtttgttttgttgagtcactagcttggcctccgctatcttctgtgtgggcactcctatctccatgctctatactgcaatcctgagtatacccaatagtcaaatacttcattgtattgataattttggagaacttgacgtttaaatgcaaaaaactgagggcaaaaagaagttgaagaaataggtagactaaaaacatttctcgtattctgaaatctttatactttgcgtgctgaccatgaggcatccatataacaaatcactgagataattagtagtcatgcacctctggtagtttgtattttcataaacgctttcccgtgctagacatttcacaaaagttagtaacattactattagattcatcttccatgttgtacatatgaaaaggaagtatatagcataagagtcgagtataattataaaactgaatatatcatcagttccatttatgcatggaagtagtatcgactgtatggactgctgttgtaggactagcacatatataaggactttgaaagacactaggaaccagatccaatcaaacattttagtaatgtgatggtcaggttaatatatatactcaatacaaaaggcatgaattaatgaaccttcgagaacaccttaggtctgaatccctcatgttcctctgcagctagaaatgggatgtgtttcatgtaataatcctgatatcaaaattcagtatgatagagcttatttctgtgctctacagaaattagtgaccagcatattggagatcagtccatcaacaaacgaatatcagaaggcaggaaaaatgcatgatgtcacctgcatcttggcaaagagtagtatgaacaggatgtcaggattaacttcaataagtgagattaaggtgcacttggaaaggattttatgccttttcagatctcaacagaaccatggcaccacaaacaacaatagtaaatctatcaggatgaaacaatcttattgctgaaacaatcgaccacacaaaaaacctgactagggtccgcatagaggatgtcgctgtcgagcggtcactggtggcggcggcctccggcgcaaggaggcaaatgacagcggtacgccgcctgcggcgacgcacagcagctatctggggtggaagcggacggcggaggcgatgagagcaggttccgccactggattggaggagggcagcggcagcggacaagaggcgccgcgccaccgctgagagggtcgagacgagacggattctcttctcgatttattttcgatttattttcccctttttgattttcttcaaatgataataaccgaatgttgaacgaggctgacgggatgctggacgtcgttcaatacagcgtccaggtctggacattgttacgaagagcgtccattcctggacgctatagcgcttagcgtccatcctacaattaaaatttccctctatcatttactagatatttaattaataggttgttaattattatatataaaaaaatgggcacatccttaccacgcgcacagagtatgtagtataacagatcaacagtacagaattacctgaagtagaaagaattaataagaattacctggattagaaagaattaataatcataataatcattttattaatttgcatgaatttgactttgtcgcccactttcagatacatattggattccagtagcttcgaactgttttttgagtatgtggagctgccaaacttcgatattgcttctgatgctctgaacaccttcaaggttaatccaaattttcagatttacaagtatagaaactaaagaattatattggaggtcgaagaatcaagattgatggttgttcttgacaagatggttgcaggatctgcttaccaaacatgaaacagttgttgctgagttcttgagttcccactacgagcaggtggtctgaaatatactctattttcatgacagaaaaataaaacaacaaaattttcttgtgagttttttaatatatatattattgatattccagtggatcaaaacgattgcattgcatgccaactgttgtttgccaaatgacctacaaaatctgttttccaactttgcgaaaacctgaatcgtattactaacatacttgagaagttgagatattccatttgttctgtgtctttctgattgtataatcttgtacagttctttgaactctacacaaggctcttaacatcacctaattatgtaacaagaagacaatcagtgaaggttagactacgttcagccgttctttgatcatcattcaatttatatgaaatttaaagtgatctatcttgtctcagttcctttcggaatttctgttggaggctccaaacgctcgaataatgaagcgttatattacggaagttcgtttcttaaatattatgattactctactgaaggtattctttataatcttcttactattcattcataaactatttaacaacagactatggtagtaagccagttacatccttttgtttgagcattttgctactcttgaacacaagtttctaccccttatctgaagagcaccagcggttgtcctccttccatacatagaagtacataaaaaagatatgtttattttaaataaattgttgcagatcttctgaaaccatcaagtgaacaaatcttcgcatttatttataagttcactttctgcataatagtcaaaatttccattgattttttttgggggtcttccatgtcactactaacctgcagcctttgtaggattcaagcaaaaatatcagaatatgcgccttccatgtttttaaggtattatatttgattgtgtgcatattctgtaggtacataacatgaagtacacataggataaattgatgtgcactcaaacaaaacgacacataaacacgcacaacaaggcctgtttagtttgaatattcaaaaatttctgttacattgatcagaatgtagtagttcagttaagatgatgctgaaaaattgaaaaattgatgggttcttttttctttgtgataccacaggtttttgttgccaatccgaacaagcctcgcagtatcatcgaggctttgatcgaaaatcgcagagaactgctgaagctactccaaaatcttcctacaagtaaaggtagccgcggcgcttgattgtttgatatgctattacctccacttcggttcaaattcaaaaggaccgaaattgttttcgctaaagcaccataaggtcataccagttatgtaaggaaatgttttttggatgtgtttgatagaactgatttcacttcatttcataggcgaagatgaacttgatgaggagaggaatctaatcattcaggggattcagaagctggcctgctcatcagcatagacacttgaattaatggaatagctggtttagggaaactgcctttactgaaaatacatgacagggtgtgcctataagaattgcgtctttttggagtttgaaatgaaatagttgcaaatagatgcacaatacaaaatgagtgcaacgaattttgttctttagggacagtactaatgttgatatgtttttttctctgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0359700, RefSeq:Os03g0359700