Os03g0362200

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Revision as of 12:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0362200| Description = Armadillo-like helical domain containing protein| Version = NM_001056694.1 GI:115453116 GeneID:4332894| Length = 322...")
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Gene Name

Os03g0362200

Description

Armadillo-like helical domain containing protein

Version

NM_001056694.1 GI:115453116 GeneID:4332894

Length

3222 bp

Definition

Oryza sativa Japonica Group Os03g0362200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:14645731..14648952

Sequence Coding Region

14645796..14647877,14648159..14648635

Expression

GEO Profiles:Os03g0362200

Genome Context

<gbrowseImage1> name=NC_008396:14645731..14648952 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:14645731..14648952 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagtacaggaagggggtcgccggcgagtccaacgatgacgacggctcgacgaaacgaggtcgtgacgctacaccgagcatccaggtggagatcgctgagtaccatggaggcggcggcggcggaggaggtcttggcaacgggggcggtggctcggcgtcgttcttcgagccgtggcgggaggccacgccgggaagcgggagcggacacgggagctcgggcaggggcggcggcgggcgcgagccgccggagaagcggctcacgctgttctccctccgcctcgccgtgctcgagaaggcggcgagcgggctcgggatgctcgacttcatgtgggcgacggtggtgctcctcggcggcttcgccagcgcgctcaaaatcaccgacttctggtgcgtcaccgtcatcctcgtcggcgagggcgcgcgcgtcttcggccgcagccacgagctggagtggcagcaccactccacgctcacctccaccgccggcagcgcgctgcgctccagctcacggctcttccgccgcctcgtgcacgcgctcgacgacccggccgccgccaccgtcaccggcggcgctcgcggccaggacgcgcgcgacagggcggcgcagttccagcgacagatcgtcgccttcatgaagcagcgcgcctggcacgcacccgacgtgtcgctgctcccttacaccggctgggtcttcgtctccaagaagatcgggaggctcctcaactggctgcaggtgctctccgccttcacctgcgtcgcgctctccgtgatgcggctatggcggcatgatttcggcgacgagcccaacaagcggccggcgctgctgctcttctacacgttggcgttgatcgaggcgctcctcttcctgctcgagaaggcgtactggacatggaagatctccgtgcggaagctgctcgagcaggtgagccgcgagtgcgagctcggtgcgtatggccacgtctcgctcacgcgcttcttctacgacgcctactcgcgctgcatcaacgggagcatcttcgacggcatcaagatggacctcgtcaccttcgccgaggagctcatcctgtccgagttcctagacgagcagctcatcggcgtgcgcatcctgcagcagttcgccgacgccaagggctccgcgcgcgacacgctgcgcaaggtcggcacgagcgcgcgctccatcgagcggctcgtcgagatgctcaactggaagcggcccgaggaggaggaggtgcgctggtgcgcggcccaggtggtgtccaagctcgccggcaagcgccagaacgcgctccgcgtgtcgggcatccccggcgccatcgagtccgtcatgtccctgctctacgccggctggagcgcgcccgtgtcggcgacgccgcacgacgtctcgccggcggcgcggaggagctacgaccacccgcagttcaaccttctcggcctgctcatcctcaagaggctcgccagggaccacgacaactgcggcaagatcggcaacacgcgtggcctcctcgccaagatcatcgagttcacgcacgcgtcgccggctctgctccgcaacacgctggcgccggagtcgcaggtgcgcgccgtgaagctcgcgctgaaggtcgtcaagattctggtgtccacgacgggcagcaccggcaagatgctccggcggggggtcgccgagaacgtgttcacggtgagcagcctgcgcgtcgtcctgcagcacgggcagcagcacagggctctgcagaagctggccacggacatcctgtcgggcctggccatggacgacaagggcaagcaggtgatcgtgggcaccggcggggtggtcaagcagctcctatcgatattcgtggatgccgagacagagctcggcggcgaggccggcgaggcgctggcgatgctggcgctggagagcgaggcgagctgcgcggcgatcctcaaacgggacgacgtgctcgaccacctcgtgtcggcgctcgagggcgacggcggggcgcgtcgtctgaacgcggcgagggtgctgcgcaacctgtgcgcgtacgccggcgagaagcatcgaccgcgcctctccgcggtgatcaaagcgatgcctgtggtactgaaggccaccatgaccggcagcgacaagatcctcgaggtgtccgtcggcctgacgacgcagatctgcaagttcatcgacggcgatcggttcgccgacgagctgcgcggcgccggcatcgacgagagagcctacgtggagcggctggcgagcatcctgcgggagcacaggtacccggtgatcagggtgccacggatgcggcggttcatcgtgcagcaggtcatctggctcatgacctcgtcctcctccgccgatggcggcggcggcggcggcggcggcgcgaactacgtatcgcttctccgggaggccgggatggagcggctgctggagtccatcgccgacaccacgtcggagctggagtgctaccacgtgttctccggcagcgtgggcatcagcaagcaccgggagagcttctcggctgccgtcgacgccgcgctggagctgctcggcggcgatggccggagctcgagctga</cdnaseq>

Protein Sequence

<aaseq>MKYRKGVAGESNDDDGSTKRGRDATPSIQVEIAEYHGGGGGGGG LGNGGGGSASFFEPWREATPGSGSGHGSSGRGGGGREPPEKRLTLFSLRLAVLEKAAS GLGMLDFMWATVVLLGGFASALKITDFWCVTVILVGEGARVFGRSHELEWQHHSTLTS TAGSALRSSSRLFRRLVHALDDPAAATVTGGARGQDARDRAAQFQRQIVAFMKQRAWH APDVSLLPYTGWVFVSKKIGRLLNWLQVLSAFTCVALSVMRLWRHDFGDEPNKRPALL LFYTLALIEALLFLLEKAYWTWKISVRKLLEQVSRECELGAYGHVSLTRFFYDAYSRC INGSIFDGIKMDLVTFAEELILSEFLDEQLIGVRILQQFADAKGSARDTLRKVGTSAR SIERLVEMLNWKRPEEEEVRWCAAQVVSKLAGKRQNALRVSGIPGAIESVMSLLYAGW SAPVSATPHDVSPAARRSYDHPQFNLLGLLILKRLARDHDNCGKIGNTRGLLAKIIEF THASPALLRNTLAPESQVRAVKLALKVVKILVSTTGSTGKMLRRGVAENVFTVSSLRV VLQHGQQHRALQKLATDILSGLAMDDKGKQVIVGTGGVVKQLLSIFVDAETELGGEAG EALAMLALESEASCAAILKRDDVLDHLVSALEGDGGARRLNAARVLRNLCAYAGEKHR PRLSAVIKAMPVVLKATMTGSDKILEVSVGLTTQICKFIDGDRFADELRGAGIDERAY VERLASILREHRYPVIRVPRMRRFIVQQVIWLMTSSSSADGGGGGGGGANYVSLLREA GMERLLESIADTTSELECYHVFSGSVGISKHRESFSAAVDAALELLGGDGRSSS</aaseq>

Gene Sequence

<dnaseqindica>66..2147#2429..2905#aagatttccacgtcgtcgatgccttttcgttgttcgcgtcgggttcaccagctaggtggttcgccatgaagtacaggaagggggtcgccggcgagtccaacgatgacgacggctcgacgaaacgaggtcgtgacgctacaccgagcatccaggtggagatcgctgagtaccatggaggcggcggcggcggaggaggtcttggcaacgggggcggtggctcggcgtcgttcttcgagccgtggcgggaggccacgccgggaagcgggagcggacacgggagctcgggcaggggcggcggcgggcgcgagccgccggagaagcggctcacgctgttctccctccgcctcgccgtgctcgagaaggcggcgagcgggctcgggatgctcgacttcatgtgggcgacggtggtgctcctcggcggcttcgccagcgcgctcaaaatcaccgacttctggtgcgtcaccgtcatcctcgtcggcgagggcgcgcgcgtcttcggccgcagccacgagctggagtggcagcaccactccacgctcacctccaccgccggcagcgcgctgcgctccagctcacggctcttccgccgcctcgtgcacgcgctcgacgacccggccgccgccaccgtcaccggcggcgctcgcggccaggacgcgcgcgacagggcggcgcagttccagcgacagatcgtcgccttcatgaagcagcgcgcctggcacgcacccgacgtgtcgctgctcccttacaccggctgggtcttcgtctccaagaagatcgggaggctcctcaactggctgcaggtgctctccgccttcacctgcgtcgcgctctccgtgatgcggctatggcggcatgatttcggcgacgagcccaacaagcggccggcgctgctgctcttctacacgttggcgttgatcgaggcgctcctcttcctgctcgagaaggcgtactggacatggaagatctccgtgcggaagctgctcgagcaggtgagccgcgagtgcgagctcggtgcgtatggccacgtctcgctcacgcgcttcttctacgacgcctactcgcgctgcatcaacgggagcatcttcgacggcatcaagatggacctcgtcaccttcgccgaggagctcatcctgtccgagttcctagacgagcagctcatcggcgtgcgcatcctgcagcagttcgccgacgccaagggctccgcgcgcgacacgctgcgcaaggtcggcacgagcgcgcgctccatcgagcggctcgtcgagatgctcaactggaagcggcccgaggaggaggaggtgcgctggtgcgcggcccaggtggtgtccaagctcgccggcaagcgccagaacgcgctccgcgtgtcgggcatccccggcgccatcgagtccgtcatgtccctgctctacgccggctggagcgcgcccgtgtcggcgacgccgcacgacgtctcgccggcggcgcggaggagctacgaccacccgcagttcaaccttctcggcctgctcatcctcaagaggctcgccagggaccacgacaactgcggcaagatcggcaacacgcgtggcctcctcgccaagatcatcgagttcacgcacgcgtcgccggctctgctccgcaacacgctggcgccggagtcgcaggtgcgcgccgtgaagctcgcgctgaaggtcgtcaagattctggtgtccacgacgggcagcaccggcaagatgctccggcggggggtcgccgagaacgtgttcacggtgagcagcctgcgcgtcgtcctgcagcacgggcagcagcacagggctctgcagaagctggccacggacatcctgtcgggcctggccatggacgacaagggcaagcaggtgatcgtgggcaccggcggggtggtcaagcagctcctatcgatattcgtggatgccgagacagagctcggcggcgaggccggcgaggcgctggcgatgctggcgctggagagcgaggcgagctgcgcggcgatcctcaaacgggacgacgtgctcgaccacctcgtgtcggcgctcgagggcgacggcggggcgcgtcgtctgaacgcggcgagggtgctgcgcaacctgtgcgcgtacgccggcgagaagcatcgaccgcgcctctccgcggtgatcaaagcgatgcctgtggtatgcgtcttatccttacaagatgaaaatgttagttatcacactctgcttctacttgacgcctcccgcgtgaccgcgtcccagacaattacgttttggatatcgatgcattgtttttaaatctgacttaattacattgcgaaaataattaagatttttcatattactatctccaattctccattctaaaaagggatttttgtagaagctttgttgagtcgtgagaccgtgtcaccgtgatgacttttttgctgacatgcacaattggtttgatggtttaggtactgaaggccaccatgaccggcagcgacaagatcctcgaggtgtccgtcggcctgacgacgcagatctgcaagttcatcgacggcgatcggttcgccgacgagctgcgcggcgccggcatcgacgagagagcctacgtggagcggctggcgagcatcctgcgggagcacaggtacccggtgatcagggtgccacggatgcggcggttcatcgtgcagcaggtcatctggctcatgacctcgtcctcctccgccgatggcggcggcggcggcggcggcggcgcgaactacgtatcgcttctccgggaggccgggatggagcggctgctggagtccatcgccgacaccacgtcggagctggagtgctaccacgtgttctccggcagcgtgggcatcagcaagcaccgggagagcttctcggctgccgtcgacgccgcgctggagctgctcggcggcgatggccggagctcgagctgagtgatgagaaattgcccgggatctgctgtctttattcctgcactaacacagatcctttttcttcttgtttattttttttaaaaaaatatttttcttagtaaaagatagcttatcctaaacgtgatgcctctcgtaggtgattcagttcataattttgtacagaacgaaccaatgaacgacagcagctgagcagcaagtacactggtctgacctttcacttttgtaggagtatgaacttatacaatgtactacctcaatttgttacagttgtaactattatacaagatataaacaccatctgatagtaagattcattg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0362200, RefSeq:Os03g0362200