Os03g0363100

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Revision as of 12:39, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0363100| Description = Armadillo-like helical domain containing protein| Version = NM_001056696.1 GI:115453120 GeneID:4332896| Length = 267...")
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Gene Name

Os03g0363100

Description

Armadillo-like helical domain containing protein

Version

NM_001056696.1 GI:115453120 GeneID:4332896

Length

2675 bp

Definition

Oryza sativa Japonica Group Os03g0363100, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:14694987..14697661

Sequence Coding Region

14694987..14697065,14697188..14697661

Expression

GEO Profiles:Os03g0363100

Genome Context

<gbrowseImage1> name=NC_008396:14694987..14697661 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:14694987..14697661 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagtacaggaaggggggcaacgcccccgccaccgagcccgacgacgacgccacgacgaaaggaggtcacgacgtgccgccgagcatcaaggtggacatcggtgagtaccatggaggaggtatcgggaacggggacggtggctcggcctcgctcttcgagccgcggccggaggagacaccggtgagccggaggaacgatcgcggcggcggcggcggcgggcgcgagccgccggagaagcggctcacgctgttcgctctccgcctcgccgtgctcgagaaggcggcgagcgggctcgggaagctagacttcgtgtgggcgacggtggtgctcctcggcggcttcgcgagcgcgctcagcaccaccgacttctggtgcgtcaccgtcatcctcgttggctccggggcgcgcgtcttcggccgcagccacgagctggagtggcagcaccgctctacgctcacctcctccaccgccggtggcgcgctgcgctccacctcccgccgcttgctccgcagcctcgggcactctcccgccgccaacccgaccgacgacggcggcgcccgtggcagtgcgaccgagacgcagttccagcaccagatcgtcgctcgcacgaagcagcgcgtttggcacgtgcccgacgtgtcgctactcccctacaccggcaggttgttcgtctccaagaacatcgggaggctcttcagctggctgcaggtgctctccgccttggcctgcgtcgcgctctcggtgatgcgcctatggcggcacgacttcggcggcgaccagcccaacaagcggccggcgctactgctgttctacacgttggcgttgatcgaggcgctcatcttcctgctcgagcaggcgtactgggtatggatgttctcccggcagaatctgatcaagacggtgagcgacgactgcaagctcggagagtactacggccccgactcgctcaagcgcttcttcttcgacgcctactcccgctgcatcacggggagcatcttcgacggcaccaagatggacctcgtcaccttcgccgaggagctcatcctgtcagagttcctcggcaatcagctcatcggcgtgcgcatcctgcagcagttcaccaccgagggctcatcggccaacgccggggaatccaatctcaacacgctgcgcaacgttggcacgaacgctcgctccatcgagcggctcgtggagatgatcaactggaagagccccggggaggaggaggtgcgccggtgcgcggccgaggtgttgtccaagctcgccgacaagagccggaacgcgctccgcgtgtccggcatccctggcgccatcgagtccgtcatgtccctgctctacaccgacgagagcgcgccggactccgcggcgccacacgacgtctcgccggcggcgcggagctacgatcaccagcagttcaaactgctcggcctgctcatcctcaagaggatcgccagggaccacgacaactgcggcaagattgggaacacccgcggcctcctctccaagatcatcgagctcacggacgcgtcgccggagctgctccacaacacgcgggcgccggagtcgccggttcgcatcgtgaggcgcgcgctcaaggtcgtcaagattctggtgtccgcgacgagcagcaccggcaagatgctccggcaggaagtcgccgataacgtgttcacggtgagcaacctgcgcggcgtcctgcagcacgggcagcagcacacggctctgcagaagctggccacggaaatactgtcgcacctggccatggacgccaagggcaagcaggtgatcgtgggcaccggtggggtggtcaagctgctgctgtcgatattcgtcaacggcgagaaggagctcggcgcggaggccggcgaggcgctggcgatgctggcgctggagagccaggcgagctgcgcggcgatcctcaaacaggatgacgtgctcgaccacctcatgtcggcgctggagggcgacggcgggccgcgtcgcctgaacgcggcgagggtgctgcgcaacctgtgcgcgtacgccggcgagaagcatcggcggcgcctctccacggtgaccaaagcgatgcctacggtactgaaggccaccatgacggggagcgagaggaccctcgaggtgttcgtcggcctgacggtgcagatctgcaagttcatcgacggcgttcggttcgccggcgagctgtgcggcgccggcatcgacgagagaagctacgtggagcggctggcgagcatcctgcgggagcaccggtacccggacatcacggtgccccggatgcggcggttcgtggtgcagcaggccatctggctcatgacctcgtcctccgccgccgccgcctccgccgccgctggcgcagactacgtatcgcttctccgggaggccgggatggagcggctgctggagtccatcgccgacaccacgtcggagctggagtgctaccacgcgttctccggcagcgtgggcatcagcaagcaccgggagagcttctccgccgccgtggacgccgcactcgagctgctcggcggcgatggagctcgagctgaggcctga</cdnaseq>

Protein Sequence

<aaseq>MKYRKGGNAPATEPDDDATTKGGHDVPPSIKVDIGEYHGGGIGN GDGGSASLFEPRPEETPVSRRNDRGGGGGGREPPEKRLTLFALRLAVLEKAASGLGKL DFVWATVVLLGGFASALSTTDFWCVTVILVGSGARVFGRSHELEWQHRSTLTSSTAGG ALRSTSRRLLRSLGHSPAANPTDDGGARGSATETQFQHQIVARTKQRVWHVPDVSLLP YTGRLFVSKNIGRLFSWLQVLSALACVALSVMRLWRHDFGGDQPNKRPALLLFYTLAL IEALIFLLEQAYWVWMFSRQNLIKTVSDDCKLGEYYGPDSLKRFFFDAYSRCITGSIF DGTKMDLVTFAEELILSEFLGNQLIGVRILQQFTTEGSSANAGESNLNTLRNVGTNAR SIERLVEMINWKSPGEEEVRRCAAEVLSKLADKSRNALRVSGIPGAIESVMSLLYTDE SAPDSAAPHDVSPAARSYDHQQFKLLGLLILKRIARDHDNCGKIGNTRGLLSKIIELT DASPELLHNTRAPESPVRIVRRALKVVKILVSATSSTGKMLRQEVADNVFTVSNLRGV LQHGQQHTALQKLATEILSHLAMDAKGKQVIVGTGGVVKLLLSIFVNGEKELGAEAGE ALAMLALESQASCAAILKQDDVLDHLMSALEGDGGPRRLNAARVLRNLCAYAGEKHRR RLSTVTKAMPTVLKATMTGSERTLEVFVGLTVQICKFIDGVRFAGELCGAGIDERSYV ERLASILREHRYPDITVPRMRRFVVQQAIWLMTSSSAAAASAAAGADYVSLLREAGME RLLESIADTTSELECYHAFSGSVGISKHRESFSAAVDAALELLGGDGARAEA</aaseq>

Gene Sequence

<dnaseqindica>1..2079#2202..2675#atgaagtacaggaaggggggcaacgcccccgccaccgagcccgacgacgacgccacgacgaaaggaggtcacgacgtgccgccgagcatcaaggtggacatcggtgagtaccatggaggaggtatcgggaacggggacggtggctcggcctcgctcttcgagccgcggccggaggagacaccggtgagccggaggaacgatcgcggcggcggcggcggcgggcgcgagccgccggagaagcggctcacgctgttcgctctccgcctcgccgtgctcgagaaggcggcgagcgggctcgggaagctagacttcgtgtgggcgacggtggtgctcctcggcggcttcgcgagcgcgctcagcaccaccgacttctggtgcgtcaccgtcatcctcgttggctccggggcgcgcgtcttcggccgcagccacgagctggagtggcagcaccgctctacgctcacctcctccaccgccggtggcgcgctgcgctccacctcccgccgcttgctccgcagcctcgggcactctcccgccgccaacccgaccgacgacggcggcgcccgtggcagtgcgaccgagacgcagttccagcaccagatcgtcgctcgcacgaagcagcgcgtttggcacgtgcccgacgtgtcgctactcccctacaccggcaggttgttcgtctccaagaacatcgggaggctcttcagctggctgcaggtgctctccgccttggcctgcgtcgcgctctcggtgatgcgcctatggcggcacgacttcggcggcgaccagcccaacaagcggccggcgctactgctgttctacacgttggcgttgatcgaggcgctcatcttcctgctcgagcaggcgtactgggtatggatgttctcccggcagaatctgatcaagacggtgagcgacgactgcaagctcggagagtactacggccccgactcgctcaagcgcttcttcttcgacgcctactcccgctgcatcacggggagcatcttcgacggcaccaagatggacctcgtcaccttcgccgaggagctcatcctgtcagagttcctcggcaatcagctcatcggcgtgcgcatcctgcagcagttcaccaccgagggctcatcggccaacgccggggaatccaatctcaacacgctgcgcaacgttggcacgaacgctcgctccatcgagcggctcgtggagatgatcaactggaagagccccggggaggaggaggtgcgccggtgcgcggccgaggtgttgtccaagctcgccgacaagagccggaacgcgctccgcgtgtccggcatccctggcgccatcgagtccgtcatgtccctgctctacaccgacgagagcgcgccggactccgcggcgccacacgacgtctcgccggcggcgcggagctacgatcaccagcagttcaaactgctcggcctgctcatcctcaagaggatcgccagggaccacgacaactgcggcaagattgggaacacccgcggcctcctctccaagatcatcgagctcacggacgcgtcgccggagctgctccacaacacgcgggcgccggagtcgccggttcgcatcgtgaggcgcgcgctcaaggtcgtcaagattctggtgtccgcgacgagcagcaccggcaagatgctccggcaggaagtcgccgataacgtgttcacggtgagcaacctgcgcggcgtcctgcagcacgggcagcagcacacggctctgcagaagctggccacggaaatactgtcgcacctggccatggacgccaagggcaagcaggtgatcgtgggcaccggtggggtggtcaagctgctgctgtcgatattcgtcaacggcgagaaggagctcggcgcggaggccggcgaggcgctggcgatgctggcgctggagagccaggcgagctgcgcggcgatcctcaaacaggatgacgtgctcgaccacctcatgtcggcgctggagggcgacggcgggccgcgtcgcctgaacgcggcgagggtgctgcgcaacctgtgcgcgtacgccggcgagaagcatcggcggcgcctctccacggtgaccaaagcgatgcctacggtatacatgtgtctaatatatttacacaagaacctttcttgagtcgtgagtcgtgacgtaattttgatttgattgttaattactatacactacatgttttgtatgatgacttgttgctgaaggtactgaaggccaccatgacggggagcgagaggaccctcgaggtgttcgtcggcctgacggtgcagatctgcaagttcatcgacggcgttcggttcgccggcgagctgtgcggcgccggcatcgacgagagaagctacgtggagcggctggcgagcatcctgcgggagcaccggtacccggacatcacggtgccccggatgcggcggttcgtggtgcagcaggccatctggctcatgacctcgtcctccgccgccgccgcctccgccgccgctggcgcagactacgtatcgcttctccgggaggccgggatggagcggctgctggagtccatcgccgacaccacgtcggagctggagtgctaccacgcgttctccggcagcgtgggcatcagcaagcaccgggagagcttctccgccgccgtggacgccgcactcgagctgctcggcggcgatggagctcgagctgaggcctga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0363100, RefSeq:Os03g0363100

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0363100&oldid=19265"