Os03g0363900

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Revision as of 12:40, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0363900| Description = Zinc finger, DHHC-type domain containing protein| Version = NM_001056704.1 GI:115453136 GeneID:4332904| Length = 446...")
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Gene Name

Os03g0363900

Description

Zinc finger, DHHC-type domain containing protein

Version

NM_001056704.1 GI:115453136 GeneID:4332904

Length

4464 bp

Definition

Oryza sativa Japonica Group Os03g0363900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:14734626..14739089

Sequence Coding Region

14734795..14734943,14735035..14735128,14736325..14736419,14736495..14736662,14736928..14737000
,14737073..14737125,14737557..14737648,14737978..14738030,14738109..14738234
,14738547..14738792

Expression

GEO Profiles:Os03g0363900

Genome Context

<gbrowseImage1> name=NC_008396:14734626..14739089 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:14734626..14739089 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgtgccgtggctgctggtggcgcacgggtcggtgacggcgctggtggtggtgtccttcctctgcgggcagtggcccatcttcgagggcaccttcgtgcagcgcatcaaccacttcctcaccttcggcgcctaccaccacctcctgcggctcgtccacgcggcgtgcggcaatggggccagggatctcgtcctcggcgtcgagagctactgctgcgaccggcccaacccgatcctgcagattttttacgttgccataataggggtaacatattttataatcgtccagacatctttccagtacattcctgggtactatgtgagtggactgcacagatacctgagtatcgtggctgttgctattggtgctttactcttcgtgctgactagcttttctgatcctggaactgtcactgctgagaatgtttctcaatatctatctgcctatccatatgatggcatcatttttgaggagaaagagtgttctacctgcaagattgccaggccagccagggcaaagcactgtagaatatgtgataaatgtgttgcacggtttgatcaccactgtggatggatgaataactgcattggggagaaaaatactcgctattttgtggcctttttagtttggcatttccttatatgtctgtacggagcggttattcttggtttcattcttgctggtgaattaaaagaaaggaaagttgtctacatattgacagtttattatggcatcgacaattcattctctgggctatttccacatgttgcacagtggctgcttgctgtgcataacacacagatactcttagcggtctttttggctataattgcattgctccttggtgggttttgtgcttaccacacacatctttgcttaacaaatacaacaacgaatgagacattcaaatggcaagactatattatgtggaggaaaaaggtgaacgaggaaaaggctgctgcaaatggtgaagtgcgcaaatcgccaccaagcaaatggaaggcgtttttctctagatcacatactgaggccgatgaaacaattgtgaaaaataacatatatgacagaggcatgattagaaacatgtgcgaggtgtttgtccctttgtcagaacggcagtcattttcccgcaagaaatctgattga</cdnaseq>

Protein Sequence

<aaseq>MDVPWLLVAHGSVTALVVVSFLCGQWPIFEGTFVQRINHFLTFG AYHHLLRLVHAACGNGARDLVLGVESYCCDRPNPILQIFYVAIIGVTYFIIVQTSFQY IPGYYVSGLHRYLSIVAVAIGALLFVLTSFSDPGTVTAENVSQYLSAYPYDGIIFEEK ECSTCKIARPARAKHCRICDKCVARFDHHCGWMNNCIGEKNTRYFVAFLVWHFLICLY GAVILGFILAGELKERKVVYILTVYYGIDNSFSGLFPHVAQWLLAVHNTQILLAVFLA IIALLLGGFCAYHTHLCLTNTTTNETFKWQDYIMWRKKVNEEKAAANGEVRKSPPSKW KAFFSRSHTEADETIVKNNIYDRGMIRNMCEVFVPLSERQSFSRKKSD</aaseq>

Gene Sequence

<dnaseqindica>170..318#410..503#1700..1794#1870..2037#2303..2375#2448..2500#2932..3023#3353..3405#3484..3609#3922..4167#aaaaggaaaaaaaagagagaaaaagatggcacacgagagcggcgacactttgcttcgcttgggtttcatcgtcgtcccctcctcctccttcctttgacctcggctcgatcgaccatcccgcggaggagacgacgccgcggcggcggcggaggactcgccggcggcggggatggacgtgccgtggctgctggtggcgcacgggtcggtgacggcgctggtggtggtgtccttcctctgcgggcagtggcccatcttcgagggcaccttcgtgcagcgcatcaaccacttcctcaccttcggcgcctaccaccacctcctgtgcgcgctgctcctccccctcccctccttcccctctcctcccctccccatggtaaccccccgctcgagggtttttttttttcttgcgcaggcggctcgtccacgcggcgtgcggcaatggggccagggatctcgtcctcggcgtcgagagctactgctgcgaccggcccaacccgatcctgcaggtccgcatagcaaactccgctactcactggttgtggttgttcttgaatcttaagcggctttggggacatatcgtgaggagggcgtttgatgatgcatatttcagcccagacaaatagactgtggttgatcctcgcctggtgatgagttccatcggaaaatgtggagcttatgcggaatgggaatatgattttcggttcaagtttggtggatgtgttagggttcttaatgatcgattcggcggtttattgactatgcattgcataagcctgctacttctgccgaacaattagctacaagttgcccgaaagagggatattgagttgtgctgttgagtgagatataaattgacttgtctttgtggtagctatttctcaacatgttttctagctaaaatatataattttatatggaggctggcctttagtggaaaagaagtattaagaatgctataaaagaacacctatgtattttgccactcattgcacgtaagctctttgggaatgcgcctgtacttatccctcattggtcatgattggtccattactttgaatgggagggccgcgccaaccttgatgatctcagggtagaggtggtagggagggaacaaaaacaatcgagtagaaaagagatttggattgtgggaagaatggaagtaaaaagtgggataatattataatagagacatgttgcttgttggtatcaattgaaatggggacacttgggttttagtagttgaggtctgtttagattctttgcatcaaatagggtacatcattgattacttttaaaaatgtatgataaagatgcagcggtgccttatatccttatatattgaaattttggttaaatgactatttttctaacacctaaattctttttatggaaaatccgtaaaccataggtcaaacaatgagcatactcatgtccctttttgtacgttgattctataagagcacatgccatattgctgccaaactctatttttttatatatatacctgattgtgttcctttttcatttatctttctcttgttagtgagaaagaaaaaatgttcctcccaggtattctgttttttgtttgctctgtgtgcttcatttaatgtttgaataactgttggattgttttgttagaaaattatcatctgtgatcaacacaacttcctaattttagtgctgtttcttctctcacctacagattttttacgttgccataataggggtaacatattttataatcgtccagacatctttccagtacattcctgggtactatgtgagtggactgcacaggtagcttttaactattagccaattttgagacataactttaccgacactggataatcatatttcttactcttgcagatacctgagtatcgtggctgttgctattggtgctttactcttcgtgctgactagcttttctgatcctggaactgtcactgctgagaatgtttctcaatatctatctgcctatccatatgatggcatcatttttgaggagaaagagtgttctacctgcaagattgccaggtacactttaaatgaaattatcatagaatagctaaaagttaaaaacatgtaatacgatatattcttatggtaactgtttcagtatctccataaaattttacgaactagtaactatgagtaatatagcataattattgatttgaagttattgtgattgtgatctgaagataacaatgtagaactaaatatccactcttctcttacattcctcttcctatcagtcagctttgtttacatcctataagaacagctcattgatttgcaggccagccagggcaaagcactgtagaatatgtgataaatgtgttgcacggtttgatcaccactgtggatggatggtacttttactttcgattatatggtattggttttgctttgtttgtatattaaatttatctttatgtgaacagaataactgcattggggagaaaaatactcgctattttgtggcctttttagtttggtaagttcttctcggatttctgttcttcctaacatctttttaccttttttattttggcataattagacagtttcttatagacttattttttttgctatcagatgcatctctctaaccctttttctacttcataattttgtgcaatagcaccccagagtatttattattttcctcaaaacacagtattttctcaaacttcaaaccaccaaccatagaaacattgattagtgtgacatgcccattgggcatccattaattctgaaacctagtcaagatgctagcctgttgttatgccacgttactatgtctgaaattgtaagtagcaacactgttaatctaacttatctgctggatatctaacagatctaaaattaaacgtatggttttattgagctacataacatttccttgtctgctgttgtttataacaggcatttccttatatgtctgtacggagcggttattcttggtttcattcttgctggtgaattaaaagaaaggaaagttgtctacatattgacaggttacagttctctttttagacaacccgcacccttattcatcaggaaccacttacttacatatgctgagttaaactctaccatttatggaatgcacacaaatactttcttctgttgtgtaagataaataaaattaaccagaatttcatcaccagcttcctgaatttctgtagtttcttatttgactatgaacaacttcagtgcatttgagaaatcgtgtacactatggcttgtaaataattgaggaattacatatgttctattcttttcccatttcattttaacttgtacttttttccatttgtaacaaattccctttttgtgttgacagtttattatggcatcgacaattcattctctgggctatttccacatgttgcacaggtatggtatagaaagagacttagtctttaattagaaaacacattgaatatcttctttaactcacgatcacttttgcagtggctgcttgctgtgcataacacacagatactcttagcggtctttttggctataattgcattgctccttggtgggttttgtgcttaccacacacatctttgcttaacaaatacaacaacgaatgaggtaagtcttaatttcctaaacctaatagcatattaaccatttgaaaatttgttctttgaaagctccatccttgcacttctaattgttagatcttgcactcaaaagttcttttcttgatagaagagaagaaagaacatcttaatcaatgtaggataatttacgcgatttcttgctagaatcgagatgatactagacattatcaagtaacaaatcagttgttccaaggaaagtaaactaagcttctaatgtgttactaatacaaaattatgatttgttcctctttccaaatttcatcgtgtgaacattttgcagacattcaaatggcaagactatattatgtggaggaaaaaggtgaacgaggaaaaggctgctgcaaatggtgaagtgcgcaaatcgccaccaagcaaatggaaggcgtttttctctagatcacatactgaggccgatgaaacaattgtgaaaaataacatatatgacagaggcatgattagaaacatgtgcgaggtgtttgtccctttgtcagaacggcagtcattttcccgcaagaaatctgattgatctgaatgctgttgcagctttgcacctgttgtatcacttctatgctgtaaatccttgtagaatattagaatcattttttccatactagagaagaaacagtctgaggatggtgatcaggagtgagcatcacacaaggagaccccccaccaaaaaaaattcagatctgcccaagttgcttttggttttgctctcctggaatagtaggtttgaacaacagtatactaccaagagttgataacttacttgatagaatctgttgacagcatatgggaatgagaattgtacattgtcttggtt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0363900, RefSeq:Os03g0363900