Os03g0366200

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Revision as of 12:40, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0366200| Description = CaMK1| Version = NM_001056714.1 GI:115453156 GeneID:4332914| Length = 7244 bp| Definition = Oryza sativa Japonica G...")
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Gene Name

Os03g0366200

Description

CaMK1

Version

NM_001056714.1 GI:115453156 GeneID:4332914

Length

7244 bp

Definition

Oryza sativa Japonica Group Os03g0366200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:14867210..14874453

Sequence Coding Region

14867633..14867771,14867781..14868187,14870140..14870270,14871316..14871357,14871469..14871577
,14872099..14872177,14872274..14872570,14872657..14872769,14873212..14873319
,14873391..14873453,14873535..14873702,14873784..14873921

Expression

GEO Profiles:Os03g0366200

Genome Context

<gbrowseImage1> name=NC_008396:14867210..14874453 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:14867210..14874453 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtctctgccatggcaagtcggcggcggtgctggagccaacggtggaggaggaggaggagggggcgacgcgcgtagccgaggccgcggcggcgccggcgaagccagcgtcgcctgcgccttcggcggcggcggcggcggcgaagcccgggacgccgaagcagcacaagttcccgttctacctgccgagcccgctcccggcgtcgagctacaagggctcgccggcgaactcgagcgtggcgtcgacgcccgcgcgcggcgggttcaagcggccgttcccgccgccgtcgccggcgaagcacatccgcgcgctcctggcgcggcgccacggctcggtgaagccgaacgaggcgtccatcccggagtccggcgagcccggcgtggcgctggacaagggcttcggcttctccaggcacttcgccgccaagtacgagctcggccgcgaggttggccgcggccacttcggctacacctgcgccgccacctgcaagaagggcgagctcaagggcgacgacgtcgccgtcaaggtcatccccaaggccaagatgactactgctattgccattgaagatgtcaggagagaagtcagaatattgagttctttggcagggcacagcaacttagtgcagttttatgatgcttatgaggatgaagaaaatgtatatatagttatggagttatgcaaaggaggtgaactgctggacaggattttggctagaggtggaaaatattctgaggaagatgcaaaggttgttatgcgccaaatcctaagtgttgcttcattttgtcatcttcagggtgttgttcatcgggatctgaaaccagagaatttccttttctcgtcaaaggatgagaactctgccatgaaggtcatagacttcggtttgtctgactttgtaaagccagatgagaggcttaatgacattgtcggaagtgcatattatgttgctcctgaagtgctccatcgatcttatggcactgaggcagatatgtggagcattggagtaatagtgtatattttgctttgtggcagccgtcctttctgggcacgtactgagtcaggaatattccgagctgtgctgaaagcagaccctagttttgaggaagccccatggccaaccctctctgctgaagcaaaagactttgtaaggaggctgctcaataaagattaccgcaagaggatgactgctgcacaagccctctgtcatccatggattcgtggtactgaagaagtgaagcttcctttggacatgataatttataggcttatgagggcttacataagttcatcttctttacggagagctgcattgagggcccttgccaagacattgacaacagatcaaatctattacctaagagaacagtttgaattgataggcccaaacaagagcgatcttattactttgcaaaatttgaagacggccttgatgaagaactccacaaatgcaatgaaggattctagggtggttgactttgttaacacaatatccaatattcagtacagaaagttggattttgaggagttttctgctgctgccatcagtgtttaccagatggaaggtttggaaacctgggaacaacatgcccggcaagcgtacgagttctttgataaggagggtaaccgaccaattgtgatcgacgagctcgcatcggaacttggattgggtccttcggttcccctacatgttgttctccaagattggatcagacatcctgatggaaaactcagcttccttgggttcatgaaactattgcatggagtttcttcgcgtaccatcccaaaaacctga</cdnaseq>

Protein Sequence

<aaseq>MGLCHGKSAAVLEPTVEEEEEGATRVAEAAAAPAKPASPAPSAA AAAAKPGTPKQHKFPFYLPSPLPASSYKGSPANSSVASTPARGGFKRPFPPPSPAKHI RALLARRHGSVKPNEASIPESGEPGVALDKGFGFSRHFAAKYELGREVGRGHFGYTCA ATCKKGELKGDDVAVKVIPKAKMTTAIAIEDVRREVRILSSLAGHSNLVQFYDAYEDE ENVYIVMELCKGGELLDRILARGGKYSEEDAKVVMRQILSVASFCHLQGVVHRDLKPE NFLFSSKDENSAMKVIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSI GVIVYILLCGSRPFWARTESGIFRAVLKADPSFEEAPWPTLSAEAKDFVRRLLNKDYR KRMTAAQALCHPWIRGTEEVKLPLDMIIYRLMRAYISSSSLRRAALRALAKTLTTDQI YYLREQFELIGPNKSDLITLQNLKTALMKNSTNAMKDSRVVDFVNTISNIQYRKLDFE EFSAAAISVYQMEGLETWEQHARQAYEFFDKEGNRPIVIDELASELGLGPSVPLHVVL QDWIRHPDGKLSFLGFMKLLHGVSSRTIPKT</aaseq>

Gene Sequence

<dnaseqindica>424..562#572..978#2931..3061#4107..4148#4260..4368#4890..4968#5065..5361#5448..5560#6003..6110#6182..6244#6326..6493#6575..6712#cacacacactcctcgccgtcttgtttcttcttcgtctgggtggttgatccatccatccagagattgcctgtgcgaggaagggagcgggcgagtggcggatttgtttttggtttgtttttgagtttgtttttattggtggtatcctctcctcctcctgtgcgaggagcagctggtggattgttcgttccagctccgtttcttgtcttgatttggaatccgggaaatttttccgcctcccgtttcttgatttccggtccccccccttccttggtggaagtgggaaggggagggggaaggattttttggtggggaattcgagggggcgaggtgatgaactcttgcctctttgaccagccttgattttcctggtgattttgcttggaatttctcggattttgtggggggttctttgatccgggctccatgggtctctgccatggcaagtcggcggcggtgctggagccaacggtggaggaggaggaggagggggcgacgcgcgtagccgaggccgcggcggcgccggcgaagccagcgtcgcctgcgccttcggcggcggcggcggcggcggcgccggcgaagcccgggacgccgaagcagcacaagttcccgttctacctgccgagcccgctcccggcgtcgagctacaagggctcgccggcgaactcgagcgtggcgtcgacgcccgcgcgcggcgggttcaagcggccgttcccgccgccgtcgccggcgaagcacatccgcgcgctcctggcgcggcgccacggctcggtgaagccgaacgaggcgtccatcccggagtccggcgagcccggcgtggcgctggacaagggcttcggcttctccaggcacttcgccgccaagtacgagctcggccgcgaggttggccgcggccacttcggctacacctgcgccgccacctgcaagaagggcgagctcaagggcgacgacgtcgccgtcaaggtcatccccaaggccaaggtcaatccaatccccttcttcttcttcttcttcttcttctatccagttcacgacttgttctccttcgctgaggttttgactcaattttcatgtttattttcctcgcttgggtttaattaattaatacacttaaaatcttctcctgcattgcttagcgtttacacctgattgaatttatattatatttgtgcttgaatgtattgtttaatgctagacttactttgggctgatgttttcaattttatgttcaaagcatcattgtgtgtggattcaacagagttacctcttgacctcatttggttcagttgccatgcttgtgtttttttagctcaattgctaaatatatcatattaggtgggagaaagagagacattacgaagtaggtttactaaatgcttccatgaggatttgttctggccattaatactttgatgaacaagttagttgcttcactcaacgcttacaaaggacagatagatgagaaaaatcacgtctccatttcgggtgtttcttgttgggtaatttgcggaggggcaatgttgctccattgaagcttgcttggtgctttacagcattggtttcaaaatgatggaatctgtttctccataatgtgcaagttctccgtatgtgaaaagcttgtgtagcatatttgcttcaagtgagccaaatggcgtcattgtctccttgagctctggtagtattaacatttttatcatcttatatttcattggctgtttagtcgtagagaactattaaatccctgagtcaaagtcaaagaattgttgtggtgttgcgcaattccagcctgtattgttattagctgcgaaacagcgttctattagttctattgaagtactttgccctttctaccataactttcaagtttcaacactgttgtagttgtagaccttcctatgtcttttggtgggaggtgtctaactactatcatatacttatagttgttgcctttctatacatcgatcatcatcttgttgtttatacaacatgttcagagtcttgacttacaattaatataatgcttttagttagggtctccctaccttttgcatgttaaaaaaatattgttgactgtatttcatgtatttatgctgttatctatcactttttggatatcagtgatactggttttccttatcgatctagtctagatatcctcctgtagtgctgtctcttgttgctcttctccttttgatgtttactctccttgataatgttaaatgatacataaaacaagcaattatagattatattgattagaaatgcatgtcttttattacgcctgttatattgttgtgcatatcattgtctgttgttatgtaactgtgcattgccaacactaatcccacgacattttttttgggtatctgtaattgatgtgttactctatgctttgtgctgtgcggtgcaatgttaatatatagaattgttggctgcgctcagagtatgcttgtatttctgcttgtggataagcatccttggtgcaatgctacttccaggccctagagccaaggcccatgcgtgcaacagttggttgatgaactacccaacatttgctgtgctatctagtctcttattgcttggctgaaaccacattgacgtggtgttgttacatgaaatgcggagttggacctgatcacctgactgattggcaaattcttatccaatgatgcagtaatcacctgactaattggctaacacatgtatttatatgagtagtatgatatagattttccattgttgtgtgtaataaacaattatttttaatcttattattgtgtaatttgattaataatactgtgaaattgctgcctttgacatctagttacatatatatgagtccactggaactccaattctttcttttttccaagagaaagtccaatttaagtaatactgctaaccagtctcacacaagcaacttctttcgacagatgactactgctattgccattgaagatgtcaggagagaagtcagaatattgagttctttggcagggcacagcaacttagtgcagttttatgatgcttatgaggatgaagaaaatgtatatatagttatggagtaagttcatagtttttccattcttcagtttaacctactgatctgctgaaagttataagtaatgactaaagttttgatattcttatgctaaataaacagaacacacaacatactaattcttctgtaggttaacacgaataacaattgttggttgtttttttatgacaaacttggtctcaagcgaacatgacatgctagcatgtgttttcatttcgccatttggtatcagtcattttgggaaggaaataaaaaatgacatattgatgcaataaattttctctatcatgtttaggttagatatcagtcgcgcgcagacatgatcacatgacatttcattttttagatacatgtgtttaggagctggcttgattggctggcgctgaccatactcatatgagacttggatgcttttgtagccagtgccagtcataatctgtaaataattctcaaacttggctcaatcacaatttactttttatggaaattgtgttttgtacaatcaattctgattgttagctccatcagtgaagcattttactcattaattgctattaaagtttctttctaatatggtacatgtttaagagattaagaggttataatccctttcactgtagacggttttaagggcctggcctcataagtcataaactatttcttagtatatacaaataaagtgtgcactattttaaacaagaatattaggggaggacccttctgattacaaagtaaacaggaatacaaaaagggaaaacatgtacacaagttaaggtccaaaaaagatagcaacagtttataaagctcccaccaaacaaatataggcagaaacactatatccataaagaaagctttcaaaattttcctagctactctatatccataaagaaagctttcaactgaattcaaatgtgtatcatttttttgtgtagtaaaatgtcccagaattcaactgtgataatctccttgaaatagggtgttgtgatacctgaaatacttccgtcaattgattattttcaactcactggaattttttcccttgatttaggttatgcaaaggaggtgaactgctggacaggattttggctaggtacttacagttatatcattttctgataccagcattgtttagaacaattgcttcattaattgtactaggattctgaaatctgaatataactgcatacatttttctttgcagaggtggaaaatattctgaggaagatgcaaaggttgttatgcgccaaatcctaagtgttgcttcattttgtcatcttcagggtgttgttcatcgggatctgaaaccagaggtaagtttgattcaagcaattcagatattgtttagatatttctcttttgtaccatttaattttcattcagttgggtgcctatgaaaaatcaaggctgtgggaaagttatctacatcgtacaacatgcttagtgatgtaagagcttataacggatagtttcttatgcatacattcttgatcctttcactctccttaggcttcgttcgttcctgccattggagggagttttttcagcgcacgcgaaatgagaaagattaatacatgattaattaaatattaattattgtaaacttgaaaaatggatttatttgactttttaaaataacttttatatagaacttttttgcaaaaaacacaccgtttaatagtttggaaagtgtgctaacggaaaacgaggaagttgaaatttgtattgagagtatagaacggggccttgttgtgcaaatactgctattattgttttcaagagcaattttgtgctgatgctaatgtttgcttgcgtttctacttgtgtcttgtagaatttccttttctcgtcaaaggatgagaactctgccatgaaggtcatagacttcggtttgtctgactttgtaaagccaggttagtctaacagattttcttaaaccttgtttagtaaaatgttttatgtttagctatttaactataggcacatctgaccatcattatattctgcagatgagaggcttaatgacattgtcggaagtgcatattatgttgctcctgaagtgctccatcgatcttatggcactgaggcagatatgtggagcattggagtaatagtgtatattttgctttgtggcagccgtcctttctgggcacgtactgagtcaggaatattccgagctgtgctgaaagcagaccctagttttgaggaagccccatggccaaccctctctgctgaagcaaaagactttgtaaggaggctgctcaataaagattaccgcaagaggatgactgctgcacaagccctctgtgagtaccataattatcttcagtttacactgtactaccagtcaactttgcagatgatgaatgcttttttgttctacacatttaaggtcatccatggattcgtggtactgaagaagtgaagcttcctttggacatgataatttataggcttatgagggcttacataagttcatcttctttacggagagctgcattgagggtaatatttcttttagggtgtattggtttgccctttactaatgatatttatctttattgccccaaattaatgtggaacaatgtcatttatataaattatgctgcatcgctttttagagggtaatttagtggtaaaatcaactttgcatagcaaatgacgttgttttaatgttcttatcattctttcttcagaatagtatgtatcgctaaccatgtgtagagcattattgcactttgcccattattttgtcatatatcgtgcaaatctgattgaatgagtaatataataaggtgatcttagaaaaatcctaaggatgctatattttctcccatattatgatctcacatttcctgtgtgcatttaccatggaatatcttgttgctgataatagtgctgtgctcactttaaaaactactactaagtagctgtttgtgttctgcaggcccttgccaagacattgacaacagatcaaatctattacctaagagaacagtttgaattgataggcccaaacaagagcgatcttattactttgcaaaatttgaagacggtgagttattttaccatttagactaaataactagtctgctatgagattgctaaagtacgctaaacctccaggccttgatgaagaactccacaaatgcaatgaaggattctagggtggttgactttgttaacacagtaagcctaaagtccttttctctctacttttcaaagtagcacctgcagttgtgtaatcacttaccctatcaatgatgccagatatccaatattcagtacagaaagttggattttgaggagttttctgctgctgccatcagtgtttaccagatggaaggtttggaaacctgggaacaacatgcccggcaagcgtacgagttctttgataaggagggtaaccgaccaattgtgatcgacgagctcgcatcggtatatgatccctaacactaaattagcttggggttgggcacgatgaaatgtttctcacaggtgatgacatactattttcaggaacttggattgggtccttcggttcccctacatgttgttctccaagattggatcagacatcctgatggaaaactcagcttccttgggttcatgaaactattgcatggagtttcttcgcgtaccatcccaaaaacctgagataataacttattttcttacatcaaccaaggcaaaagtgtgatgactaaactaatctctggctgtctggagaagcggcatggaaccagtacaaagattaacaaagctgtcctagtgtaacaagtgaaaaagctctcctgtcaggcccgcgaatttcgccttctcttaccagatgattgatgttgtgtttgtattcaggtttgtttagaggtgaatgtacagatgagtttaggaaacaggaaaaatgaggtgctaagaaagtgaaacatggtttaatttcgattggtgtaactgtgtgcgtttgatcttcgccgatctgtgaatgtcgtgattggactgaaattgagaagtgaggtggtatcagtaccatattcgtagatatttcttgagtttttttttcttattgaaatttactcgtgtttatttgcaacagtttggctcattggctgtacatcgatgtgatgaaaacggctgaaaacgatatcaatttttttttacataaacaatatcagtatggttaggaattttttat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0366200, RefSeq:Os03g0366200