Os03g0368600

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Revision as of 12:40, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0368600| Description = Haem peroxidase family protein| Version = NM_001056723.1 GI:115453174 GeneID:4332924| Length = 5076 bp| Definition ...")
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Gene Name

Os03g0368600

Description

Haem peroxidase family protein

Version

NM_001056723.1 GI:115453174 GeneID:4332924

Length

5076 bp

Definition

Oryza sativa Japonica Group Os03g0368600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15002411..15007486

Sequence Coding Region

15002411..15002590,15005681..15005935,15006725..15007486

Expression

GEO Profiles:Os03g0368600

Genome Context

<gbrowseImage1> name=NC_008396:15002411..15007486 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15002411..15007486 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctcccatgggcggcggcgatggaatcatggtggtcagcagcagcagctggtggtggagcccaagttccaccgtagcgacggtagtgcaagccgtatgaaaccaccgccttccacgacgcggagcgccgcctgggtcctcagcctcaggtccgactcgccaagccgccctcctcagattaagcagcagcagcaagaactgattaccaagagctgcgcgctaatggctgcacacacaattaagctcgccgtcgcggtgacttgcacgctgctccttgcagccgcgtgcagtggcttggaggttggctactacaagaagtcgtgcccccgcgttgagaccatcgtgagggaggaggtgaagaagttcgtctacaagaacgccggcatcggcgccggcctcatccgcttgctcttccatgactgcttcgtcgagggatgtgatggctcggtgctcctggacccaactccggcgaacccagccccggagaagctgagcccgcccaacttccccagcctccgcggcttcgaggtgatcgacgccgccaaggacgccgtcgagaaggcctgcccgggcgtcgtctcctgcgccgacatcgtcgccttcgccgcccgcgacgccgcctacttcctcagcaggatgagggtcaagatcaacatgccggcgggccgcttcgacggccgccactccaactcctccgacgccctcgacaacctccccccgcccttcttcaacgtcaccgagctcgtcgacatcttcgccaccaagggcctcgacgccgaggacatggtggtgctctccggcgcccacaccgtcggccgctcccactgctcctccttcgtccccgaccgcctcgccgtcgcctccgacatcgacggcggcttcgccgggctcctcaggaggaggtgccccgccaacccgaccacggcgcacgaccccaccgtgaaccaggatgtcgtcacccccaacgcgttcgacaaccagtactacaagaacgtcattgcccacaaggtgctcttcacgtcggacgcggcgctgctgacctcgccggcgacggcgaagatggtgtcggacaacgccaacatccccgggtggtgggaggacaggttcaagaaggcgttcgtcaagatggccgccgtcgacgtcaaaaacggctaccagggcgagatcaggaagaactgcagggtggtcaactaa</cdnaseq>

Protein Sequence

<aaseq>MSSHGRRRWNHGGQQQQLVVEPKFHRSDGSASRMKPPPSTTRSA AWVLSLRSDSPSRPPQIKQQQQELITKSCALMAAHTIKLAVAVTCTLLLAAACSGLEV GYYKKSCPRVETIVREEVKKFVYKNAGIGAGLIRLLFHDCFVEGCDGSVLLDPTPANP APEKLSPPNFPSLRGFEVIDAAKDAVEKACPGVVSCADIVAFAARDAAYFLSRMRVKI NMPAGRFDGRHSNSSDALDNLPPPFFNVTELVDIFATKGLDAEDMVVLSGAHTVGRSH CSSFVPDRLAVASDIDGGFAGLLRRRCPANPTTAHDPTVNQDVVTPNAFDNQYYKNVI AHKVLFTSDAALLTSPATAKMVSDNANIPGWWEDRFKKAFVKMAAVDVKNGYQGEIRK NCRVVN</aaseq>

Gene Sequence

<dnaseqindica>1..180#3271..3525#4315..5076#atgagctcccatgggcggcggcgatggaatcatggtggtcagcagcagcagctggtggtggagcccaagttccaccgtagcgacggtagtgcaagccgtatgaaaccaccgccttccacgacgcggagcgccgcctgggtcctcagcctcaggtccgactcgccaagccgccctcctcaggtccgactggccaccgccaccaccctccctgcctctactactgctggaaggtgaaagaggaggaagagcaaagagaggaaagagatagagagaaggaagaggggtgaggaagaagatttgatgagaagtcgatgataagttggttcctcccgctaactcagcaagtcaacatcagtcaacctatcacgtcaacagaaaccacttcccaaactattaaagaagtcgatttacaccggttttcgaagatgagaggtgttatagctagttttgtgggtgagagaggtgattcaatcaggagaaagatatgagagaaggcaaaatagactcccctacccaagaaggccttccttttccagagaagatgagaaagcgggctgagttctagacccattttgagctcatacacaatgccaacagccgcaggcatttcattgacctgatcttgtaccgttgttctactgcaatttggagccacttgttctttcaaaaaagagaaaaaaaatggagctgcttcttatgctcactgagagaaactcttcaaagtcaactggattataacttctattcactgattatttatatgtgcttgtccttgcattgtaacatccaggcagatgatatatgtcttgccatatttaaagtagacttgttatttttcttatggattaaaaaatatatttttccacatatttagcatttcggtacatggggttatcatctagttttatgttaattgtgtcttgactcttgacatgcaaactacttttcttatcattctaaatatataaagtgattctcatctgttttccttcgtttatgccatattggaacaatgagttattgattttgagaccaaacatcttagcgaaggttaggaaggacgaaatgggtatcatgtcattattcaaaagtgaaggggccactacgtgaaaactaaagcacccaattttctatagcaccctactccctccgttcctaaaaagctattgtctcataaagtgtcaaaggcatctaattaagcaagcgattaaaagactttcataatcttcgttatgtggagagaaaatgagagaggacggagccctactcgtttgatggctacgaatctaaaatacagagttcgtgagagaaaattttaagataaaaagacaggacgaatcgagaagggagtactatacgccacaagctttggcattagctaattaatatcggaacatgaatgttgccaagtcagaaagctaagctagggaatgttggtgacaaccacgacctgccgcaaattgacttgcaagagatcaaattaacaatgtgtataatatgcttctactattaattatatgcaagttgccacaacttaggttgagtttcttttgtctactttctcatcacttccctccttttccacgcgcatgcttttcaaactactaaacgatattttttttaaaaaaatttttatacgaaagttgctttaaaaatcatattaatccattttcgaatattaataaaccatcatgtttttcgtgcggggatatagagttccaaactctacctcccgaatgcggccttattacttttatttctcactactagatactaccaagtaccaagagacaacgttcttagcttataggaatatactcgctccatttacaaatagatcgcttttgattttgagttatcttgcttaatttgaccaactatttttaaaataatctaactatttagcctcaaactataattgaaactaacttactaatgcatattatgttgaaatctattcactttcatatgacttaaaaagtagcgctcaaagtttgtctacctcttatcaaaaccaacaattataagtgatgaaagggatcggagtgaaaaatcttagctacattgtaacattattatttccagtagttattctttatcatcccgttgccattaattataattcagtattattttatctatcacatccacccctcacaatcctcattgctgtatgttgacttttttttgcccgggtcgtctcttgtataattgatggtacattctctctttaccctctatatgccatctaggatcttatatgatatggcaatttgcaaagtgacagcctagctatgtatatattgttgaacatgccctaacattcagctaagaacaataaactgacctgctctgcgtacagatcgattaattgaacctcatatcagcccagcaactcatgcaatgaccaccgaaaaaaaaaacaaaaaaaactcatgcaatgaaactttataaccatttagttaactagatgagaatgtgcattgtgggaggtatgtatatatgtgaagggttaattgtagagtattcccgcacaaagcctggtagagtattttcagctaaatatctcgagtgaagtactcacttcgtccaaaatataagggattttgagtggatatgacatatcctaatacaataaatctagacagactccctctccagattcattgcgctaggaagtaggaagtgtcacatacaccaaaaatcttttatatttagggacagaaggagtattaaagaattcatcagcagttttgttgattgttttactggagtatttatgcccataaagaatattgtagtatctagctgcacaatcactgttcaaagcaggacacaattaaaatggagtagctggcttaattagtctgttgatttcttttaaactgtcttaaaaaaaaggttctactcctccacatatttatgtagtgacggacctccagaagaaaaagaaaataaaacagtaggggagagcaatatctagctaggtacactttactccaaagcatatatactctgctcaatgctttacccagtttgtagttggattatggcttccatgttcataaacacagctattatctcccatataataattatactccatcattcattgatgagttcaattaagtaactatgaatgccccaagacttagtccggataatgcatataaccatcatgcacatgcatcacacctataaatacccatcattactacatactaacacaccatcaccctcatcttagcgagctagctctttaattagcagattaagcagcagcagcaagaactgattaccaagagctgcgcgctaatggctgcacacacaattaagctcgccgtcgcggtgacttgcacgctgctccttgcagccgcgtgcagtggcttggaggttggctactacaagaagtcgtgcccccgcgttgagaccatcgtgagggaggaggtgaagaagttcgtctacaagaacgccggcatcggcgccggcctcatccgcttgctcttccatgactgcttcgtcgaggtacatacatggctgaacctatagcaagatatatgggcagctgcatttatatttttttgaaatttacggttcgagtaccagaaatatttttgttctataaatgtgaattgtcatgccgcccctctggtacccgagttattatgaaatgacaatttttttatattaatgtgataattcccaaaattttcttacggttcattaaaaatactcgtatctttttgagtaaaaataattttatgattgttgaggaggtactgaaagatataatatttggttaattaatttgagatacctctggccaacttttctattttggaaaaccccttgaaaaaaaaaatttaagcagcggtagacttaagctttcggtaatgtaggaccaattgaaatttaaacaaattttatttaaattagttttggtaattaacttagtacctaaacactgaaaagttactccctccgtattttaatatatgacgccgttaactttttgatagacgtttgacctttcgtcttattaaaaaaatttatgtaattataatttattttattgtgacttgatttatcatcaaatgttctttaagcatgacataagtatttttatatttgcataaaaattttgaataatacgagtggttaaacgttgttcgaaaagtcaacggtgtcatacattaaaatacggagggagtactaaattttgcactacaaaatgtattaacaaaccaaagaaaaattgtacatatttgcatatcagtgagcttgacgcgccacatctgcatgtatattttacagggatgtgatggctcggtgctcctggacccaactccggcgaacccagccccggagaagctgagcccgcccaacttccccagcctccgcggcttcgaggtgatcgacgccgccaaggacgccgtcgagaaggcctgcccgggcgtcgtctcctgcgccgacatcgtcgccttcgccgcccgcgacgccgcctacttcctcagcaggatgagggtcaagatcaacatgccggcgggccgcttcgacggccgccactccaactcctccgacgccctcgacaacctccccccgcccttcttcaacgtcaccgagctcgtcgacatcttcgccaccaagggcctcgacgccgaggacatggtggtgctctccggcgcccacaccgtcggccgctcccactgctcctccttcgtccccgaccgcctcgccgtcgcctccgacatcgacggcggcttcgccgggctcctcaggaggaggtgccccgccaacccgaccacggcgcacgaccccaccgtgaaccaggatgtcgtcacccccaacgcgttcgacaaccagtactacaagaacgtcattgcccacaaggtgctcttcacgtcggacgcggcgctgctgacctcgccggcgacggcgaagatggtgtcggacaacgccaacatccccgggtggtgggaggacaggttcaagaaggcgttcgtcaagatggccgccgtcgacgtcaaaaacggctaccagggcgagatcaggaagaactgcagggtggtcaactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0368600, RefSeq:Os03g0368600