Os03g0370500

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Revision as of 12:40, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0370500| Description = Similar to H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (Nucleolar protein NAP57 homolog) (Nopp-140 associa...")
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Gene Name

Os03g0370500

Description

Similar to H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (Nucleolar protein NAP57 homolog) (Nopp-140 associated protein of 57 kDa homolog) (AtNAP57)

Version

NM_001056734.1 GI:115453196 GeneID:4332935

Length

2185 bp

Definition

Oryza sativa Japonica Group Os03g0370500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15096712..15098896

Sequence Coding Region

15096790..15098565

Expression

GEO Profiles:Os03g0370500

Genome Context

<gbrowseImage1> name=NC_008396:15096712..15098896 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15096712..15098896 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccacgccaccgccggccgccgccgcctccccggccaccgaccaaggcaagaccaagtcgaagaagaagagcaagaagcatcaggaggacacctcctcctccctggccgtcgccgcggcgtcggtggatgaggcggcggaggccaaggccgacggctacctgatcaagccgcagtcggtggcgccgccgctggacacgtcggcgtggccgctcctcctcaagaactacgaccgcctcaacgtccgcaccggccactacaccccgctccccgccggccactccccgctcaagcggcccatcgccgagtacctccgctacggcgtcatcaacctcgacaagccgtcgaacccttcctcgcacgaggtcgtcgcctggatcaagcgcctcctccgcgtcgagaagaccggccacagcggcacccttgaccccaaggtcaccggcaacctcatcgtctgcgtcgaccgcgccacccgcctcgtcaagtcccagcagggcgccggcaaggagtacgtctgcgtcgcgcgcttccacgccgccgtgcccgacaccgcccgcgtcgcgcgcgcgctcgaggcgctcacgggcgccgtcttccagcggcccccgctcatctccgccgtcaagcggcagctccgggtccgcaccatctacgagagcaagctcctcgagcacgacgccgaccgccacctcgccgtgttctggatctcctgcgaggccggcacctacgtgcggacgctctgcgttcacctcggcctgctgctcggcgtcggcgcgcatatgcaggagctccgccgtgtccggtcggggatcctcggcgagaccgacaacatggtgacgatgcacgatgtcatggacgcgaggtgggcgatggacaacttcaacgatgagtcctacctgcggcgcatcgtcatgccgctggaggtcctgctcactagctacaagaggcttgttgtgaaggattctgctgtgaatgctatatgctatggtgcgaagctcatgatccctgggttgcttcgattcgagaatgagattgaagtaggggaggaggtggttctcatgacaaccaagggggaagcgattgcgatcggcattgcggagatgaccacggctgttatggcgacttgtgaccatggagcggttgccaagattaagagggtggtgatggatagggacacatacccgaggaagtgggggcttgggcctgtggcgcttaagaagaaaaagatggttgctgaagggcttcttgacaagcatgggaagccaaatgaaaagacaccaagtgagtggcttcgcaatgccgtgcttccagctggtggtgatgcaatgattgccggcattgctgcagcacctgagccagagaagccaaaggtgaaagaggaggcagatgtggctgaagagaccaaggagaagaaaaagaagaagcataaggactgggcaggtgacaatgctgatgaggggaggaagaggaaggttggagatgatgatctctctgcttctgtgagtgcgaagaagattaaggttgaggaagaggctgatgcagtggaaggggaaaagagtgagaagaagaagaagaaaaagaaggacaaggctgaatcggcatatgccgatggagaggtgaaggctgagttgtctgatggggagaagggtggcagtgagaagaagaaaaagaagaagaagagcaaggaaggagaagctggggatgatgaagctgagaaaagtgagaagaaaaaggagaagaaaaagaagaatcgggatgcagaggtgacacaatag</cdnaseq>

Protein Sequence

<aaseq>MSTPPPAAAASPATDQGKTKSKKKSKKHQEDTSSSLAVAAASVD EAAEAKADGYLIKPQSVAPPLDTSAWPLLLKNYDRLNVRTGHYTPLPAGHSPLKRPIA EYLRYGVINLDKPSNPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCVDRATRL VKSQQGAGKEYVCVARFHAAVPDTARVARALEALTGAVFQRPPLISAVKRQLRVRTIY ESKLLEHDADRHLAVFWISCEAGTYVRTLCVHLGLLLGVGAHMQELRRVRSGILGETD NMVTMHDVMDARWAMDNFNDESYLRRIVMPLEVLLTSYKRLVVKDSAVNAICYGAKLM IPGLLRFENEIEVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGAVAKIKRVVMDRD TYPRKWGLGPVALKKKKMVAEGLLDKHGKPNEKTPSEWLRNAVLPAGGDAMIAGIAAA PEPEKPKVKEEADVAEETKEKKKKKHKDWAGDNADEGRKRKVGDDDLSASVSAKKIKV EEEADAVEGEKSEKKKKKKKDKAESAYADGEVKAELSDGEKGGSEKKKKKKKSKEGEA GDDEAEKSEKKKEKKKKNRDAEVTQ</aaseq>

Gene Sequence

<dnaseqindica>79..1854#ctttctcctccccctcccgccgccgccattcgcctcccgcgaaaaccctagccgccgccgccgccgccgctgcccaaaatgtccacgccaccgccggccgccgccgcctccccggccaccgaccaaggcaagaccaagtcgaagaagaagagcaagaagcatcaggaggacacctcctcctccctggccgtcgccgcggcgtcggtggatgaggcggcggaggccaaggccgacggctacctgatcaagccgcagtcggtggcgccgccgctggacacgtcggcgtggccgctcctcctcaagaactacgaccgcctcaacgtccgcaccggccactacaccccgctccccgccggccactccccgctcaagcggcccatcgccgagtacctccgctacggcgtcatcaacctcgacaagccgtcgaacccttcctcgcacgaggtcgtcgcctggatcaagcgcctcctccgcgtcgagaagaccggccacagcggcacccttgaccccaaggtcaccggcaacctcatcgtctgcgtcgaccgcgccacccgcctcgtcaagtcccagcagggcgccggcaaggagtacgtctgcgtcgcgcgcttccacgccgccgtgcccgacaccgcccgcgtcgcgcgcgcgctcgaggcgctcacgggcgccgtcttccagcggcccccgctcatctccgccgtcaagcggcagctccgggtccgcaccatctacgagagcaagctcctcgagcacgacgccgaccgccacctcgccgtgttctggatctcctgcgaggccggcacctacgtgcggacgctctgcgttcacctcggcctgctgctcggcgtcggcgcgcatatgcaggagctccgccgtgtccggtcggggatcctcggcgagaccgacaacatggtgacgatgcacgatgtcatggacgcgaggtgggcgatggacaacttcaacgatgagtcctacctgcggcgcatcgtcatgccgctggaggtcctgctcactagctacaagaggcttgttgtgaaggattctgctgtgaatgctatatgctatggtgcgaagctcatgatccctgggttgcttcgattcgagaatgagattgaagtaggggaggaggtggttctcatgacaaccaagggggaagcgattgcgatcggcattgcggagatgaccacggctgttatggcgacttgtgaccatggagcggttgccaagattaagagggtggtgatggatagggacacatacccgaggaagtgggggcttgggcctgtggcgcttaagaagaaaaagatggttgctgaagggcttcttgacaagcatgggaagccaaatgaaaagacaccaagtgagtggcttcgcaatgccgtgcttccagctggtggtgatgcaatgattgccggcattgctgcagcacctgagccagagaagccaaaggtgaaagaggaggcagatgtggctgaagagaccaaggagaagaaaaagaagaagcataaggactgggcaggtgacaatgctgatgaggggaggaagaggaaggttggagatgatgatctctctgcttctgtgagtgcgaagaagattaaggttgaggaagaggctgatgcagtggaaggggaaaagagtgagaagaagaagaagaaaaagaaggacaaggctgaatcggcatatgccgatggagaggtgaaggctgagttgtctgatggggagaagggtggcagtgagaagaagaaaaagaagaagaagagcaaggaaggagaagctggggatgatgaagctgagaaaagtgagaagaaaaaggagaagaaaaagaagaatcgggatgcagaggtgacacaatagttggagagtgtaattttagccagatcgttgacattgtaggttgcagattggaggtgtctacactgacctctggcttgttgttcacttgcaaacaataatcattctagaggcctagtttagcatttttatatcactatccgtttactgctttggacatgaaatgcaaattaactaggccagcctttttatattgccccactcatgatggcctatttgtgttgctgttccagttatcacttagatgtgatgaattttgctccattgaagttattggtcttttgatttggtacatgctgctgcctcatttatgaaattacttgccttggtgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0370500, RefSeq:Os03g0370500