Os03g0374100

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Revision as of 12:40, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0374100| Description = Hepatocellular carcinoma-associated antigen 59 family protein| Version = NM_001056746.1 GI:115453220 GeneID:4332947| ...")
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Gene Name

Os03g0374100

Description

Hepatocellular carcinoma-associated antigen 59 family protein

Version

NM_001056746.1 GI:115453220 GeneID:4332947

Length

3941 bp

Definition

Oryza sativa Japonica Group Os03g0374100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15272284..15276224

Sequence Coding Region

15272801..15272973,15274154..15274311,15275250..15275323,15275426..15275540,15275655..15275891
,15275994..15276070

Expression

GEO Profiles:Os03g0374100

Genome Context

<gbrowseImage1> name=NC_008396:15272284..15276224 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15272284..15276224 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggaagaacttccgcaagcggaacctcgaggcggacgccgccgccgaccactccgacgacgacgacgcccgccgcgtcgccctggaggagatcaagtacatgcagaagctccgggagaggaagctgggcatccccgccgccgccgccgcagcgggcgcgtcgtcagcggcttctgccgacggggcctccccccgcggaagaggcggcggcggaggtgggttagcggccggaggggatgccgagaaggaggacctcgtcctccaggacaccttcgcgcaggagaccgccgtcaccatcgaggatcccaacatgctgaggtatgtggagaacgagctgttgaagaagaggggcaagaaggttgatgtgaaggacaaggaggagaaagaccaggtcgatgagctctacactgtgccagaccacctcaaggttaggaagaagaactcggaagagagctcaacgcagtggaccactggcattgctgaagttcagctgcctattgagtacaaattaagaaacattgaagagaccgaggcagctaaaaagatgctacaagagaaaaggcttgccggtaaaacaaaatcagatgctaacattccgtcgagctataatgctgactttttccatcgcggaaaagattacaccgaaaagttgagaagagagcatcctgaactgtacaaagatcaaggttcacaggctaatggaactggaggtaaatcaatgggtggtaaccatccagatggtgctggtgcagggcggagagaagctgctactgatgagttgttgcttgagcgtttccgcaagcgtgaaaaattccgtgtcatgcgcagataa</cdnaseq>

Protein Sequence

<aaseq>MRKNFRKRNLEADAAADHSDDDDARRVALEEIKYMQKLRERKLG IPAAAAAAGASSAASADGASPRGRGGGGGGLAAGGDAEKEDLVLQDTFAQETAVTIED PNMLRYVENELLKKRGKKVDVKDKEEKDQVDELYTVPDHLKVRKKNSEESSTQWTTGI AEVQLPIEYKLRNIEETEAAKKMLQEKRLAGKTKSDANIPSSYNADFFHRGKDYTEKL RREHPELYKDQGSQANGTGGKSMGGNHPDGAGAGRREAATDELLLERFRKREKFRVMR R</aaseq>

Gene Sequence

<dnaseqindica>3252..3424#1914..2071#902..975#685..799#334..570#155..231#gttccgatttggggaaaaaaaaaataaaaaattcgaaccaaacctatccaaaatccccatctcgccaccatctgcaaactcgccgccggccaccccgccgtcgacgaaccccacccaaacctcgccggggaaccagtccaagctccgtccaaccatgcggaagaacttccgcaagcggaacctcgaggcggacgccgccgccgaccactccgacgacgacgacgcccgccggtacccctcccctctccccgctcccgccgccgcgcctctcgcttgggttttggtagggatctctcgctgactgacgcctctctccctctccccccctcgcagcgtcgccctggaggagatcaagtacatgcagaagctccgggagaggaagctgggcatccccgccgccgccgccgcagcgggcgcgtcgtcagcggcttctgccgacggggcctccccccgcggaagaggcggcggcggaggtgggttagcggccggaggggatgccgagaaggaggacctcgtcctccaggacaccttcgcgcaggagaccgccgtcaccatcgaggatcccaacatgtgcgtttttaacttcgcgtgtgattgttcttgccaatctgttgttttcattcatctttgatgatgcggaattgaagcggagcgtatgtgcgtgcgtgggtctgatgtttgaaggctgaggtatgtggagaacgagctgttgaagaagaggggcaagaaggttgatgtgaaggacaaggaggagaaagaccaggtcgatgagctctacactgtgccagaccacctcaaggttggtagccgaacagagcttcgatgcactcctgaaaggatatttcatggttttgatatgtgtgcattgtaatgatggtgccaatcaattttttgcttataggttaggaagaagaactcggaagagagctcaacgcagtggaccactggcattgctgaagttcagctgcctattgagtaagttcttgtgccccttcgtttgttcttgtttataaaaggttcatttgttcatgtttataaaaggttgttaaggtagtcttccatattatgttgtaattcaaaggggaaggtgcccaaaatactgcaatgcatcataaggagatgtgcatatgggcttgttaataaggatatttattaattgactagctgaatgcctgtgcattgcaacagaattttggaaaagaagaaattcattatacacattttaaataccctaaacaaatttgccacattatttttctctaatcatctagatagatgctttcgccatcaccttcacacgggaatttagaagacacatgttactacgccctaacaacaagtagcccacctatcagggagtgggtggtggtgggcggcaaattcaccactcagcaccaccattggagtcttttaaaatggtatagataactgaacctacaaaactccctacaagtatgcactggtcttatggacatctctggttgtacttctattaaaaaagtacaacttttcttctatcatacatgggaatgatgtgataatccaattgagactttttaggacagcatgatagttagataagataaatggtccagtgggatggacaaacctgtaactgttattttcaatctaaagttctaaactgatctatgcatacaatggtgtgctcgaattataattcctgatttcgaaggtctctgaagggtcaacaactcaacattgtactgtcagcattgtgggttcaatataacctaaaaggttcctgttcctcgttaatattctcaaggttcttggtgctatatatgtatattaatctattattctggtactagagtcatgcactcatgcgtttctttagaactgggcctgcagctatatacagattcatgttaccatcttcttgattgttgcaggtacaaattaagaaacattgaagagaccgaggcagctaaaaagatgctacaagagaaaaggcttgccggtaaaacaaaatcagatgctaacattccgtcgagctataatgctgactttttccatcgcggaaaagattacaccgaaaagttgagaagaggtttgtacatatacctttcagttttcaggttatcataactagttttacacttgtagtgtcatcaccagaaactatcgagtcttaagtctatctgatattgtaaggcacataatgctcccagaggagtttaccagtctaataaacagaaacgccttcaaaaagtactatatgtttctaattgtggtttctaggaacgaataatttgtaaaagtacaactttttttaattttatatttacctcgcacataaagttaaataacaggtcaagtctatcagaaatgtagaattgtagacaggcataaattttgtcactagtacactgccgtagtgctgcaccagttcttcaaataaatatatattctattttttatttaaaaagccaaaacaactatcttccaatctaaaactaagtaaaacatgttttcttgtaatctacatatgcacatgtgtaaacgatgaaattggttaaaaaaggatcatgcaaatgagtaattcatatgcataaatacatggatgatcaatgtaaagcacacgaacaccattatcgattcctcttttttttttcatgagtaagagagagatgcaaggtatgcgcacaccagtcttatcagatgccagctttatgtaacaactgatgattggcacttgatctaagccatgaacagagctttcgaatgataatttgcatatcagatattcctcttgattcacttcaatcacctgggcctgctgccagcttttgaccagttgcagagcaacacttcaatcacaacaacttatttccagttttagcataccgaatataactttattcttaagatatccctttttattaagaacaatttgctatataaagaaaacagaggtacccaatggacctacagcagaagtattcaggttttatataagagttttgatcttcagctgtctttaatacagatcaattgttcccctcaatagacctgaattttaaattaacattgaaggaatccactaatcgttacataatacaaattgcaaatagcctgtgaaacaatctatgctgcatcaaaatccacgaatatgggaaatgtgatggtagcaataccatttttgaacttctgttttagaaacaatagctgtggcatatcattgatataatttatcgtttaagtgctaaactgttccattttccttgcagagcatcctgaactgtacaaagatcaaggttcacaggctaatggaactggaggtaaatcaatgggtggtaaccatccagatggtgctggtgcagggcggagagaagctgctactgatgagttgttgcttgagcgtttccgcaagcgtgaaaaattccgtgtcatgcgcagataacatgaaatggaataggatgctaacttatgctatttcctttaaagggcaagcgtgtcagtgtgaccacatgatggccctctatacatcggttgattttggcttttgcttctaaagccagtgtccatggctcatcatgttataggcgtatcttcgaagcatttgggaaaattggacaggtcttcatgaaactgatcaatattgttctgtactgagcagcaatccaggatctcgtttctctcttttctttaaaactgctggttcaaccatggataaattgccaatgatctcagatatgcctttccatcccgatcctgaggcttaccttccatgcttatcatttctgctgcttacacaaccaccttgcggcttgcaccttattactgaaaatttcctggatataagcaagcactggcaatgtaccttatgttatattttcatcagaaacactcagctttgttgatgttgcccttctgaaacaaggaaaagctgtcagtaaagaagttgttaatttctgctc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0374100, RefSeq:Os03g0374100