Os03g0374400

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Revision as of 12:40, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0374400| Description = Conserved hypothetical protein| Version = NM_001056747.1 GI:115453222 GeneID:4332948| Length = 9538 bp| Definition ...")
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Gene Name

Os03g0374400

Description

Conserved hypothetical protein

Version

NM_001056747.1 GI:115453222 GeneID:4332948

Length

9538 bp

Definition

Oryza sativa Japonica Group Os03g0374400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15279768..15289305

Sequence Coding Region

15279917..15279969,15286719..15286989,15287398..15287634,15287750..15287967,15288423..15288684

Expression

GEO Profiles:Os03g0374400

Genome Context

<gbrowseImage1> name=NC_008396:15279768..15289305 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15279768..15289305 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcacgcgtcctccccctcagcatcgaggcgggggagatggccatgcccagacgtgaagaggtagttacagacatgccaagctcttccgcagtggcatcaggcaacggaatcgaacaacctgagcaaaacacaaaggatgatgaatatgaaaggctggtcagaccagctcatagtgtaatagctgatgataacacggtagtcctacctgaagaacctacctcaaggtccatttggtggatgaaagttctgcttggctgcttccttcttatattagtatcttatgtcttcgtgaaatggggagtcccctttgccttcgagaaggttctcttgccaatcatgcaatgggaagcaagtgcctttgggcgtccagttttggctgttgttctcgttgcatctttagccctcttcccagttactttagtcccttctggaccttccatgtggctagctggaatgatctttggctatggttggggtttcttgattattatggttgggactactataggcatggtggttccatattggattggctcattgttccgcgaacgtctgcatgcatggttaaaaagatggcctcagcagatagctctaataaaacttgctggggaaggaaattggttccagcagtttagagttgttgcactattcagaatctcgccatttccatatacaatttttaactacgctgtaactgtgacagaaatcaagttcaacccttatctatgtggttcaattgctgggatgatacccgaggcgttcatctatatttatagcgggcggttgatacgcacattggctgacatgaagtatggcaactacaagatgacaccggtggagataacatacaacgccatctcgttcgtcatcgctgttgtcctcacggtcgccttcacggtgtacgccaagagagctctgaatgacataaaagagtcggaaggtattttaacagaagagtatggcatatctactggccacaagaatccccatcaagagcgctccccatcacggcctgtaccattggatgatgttgtatga</cdnaseq>

Protein Sequence

<aaseq>MARVLPLSIEAGEMAMPRREEVVTDMPSSSAVASGNGIEQPEQN TKDDEYERLVRPAHSVIADDNTVVLPEEPTSRSIWWMKVLLGCFLLILVSYVFVKWGV PFAFEKVLLPIMQWEASAFGRPVLAVVLVASLALFPVTLVPSGPSMWLAGMIFGYGWG FLIIMVGTTIGMVVPYWIGSLFRERLHAWLKRWPQQIALIKLAGEGNWFQQFRVVALF RISPFPYTIFNYAVTVTEIKFNPYLCGSIAGMIPEAFIYIYSGRLIRTLADMKYGNYK MTPVEITYNAISFVIAVVLTVAFTVYAKRALNDIKESEGILTEEYGISTGHKNPHQER SPSRPVPLDDVV</aaseq>

Gene Sequence

<dnaseqindica>150..202#6952..7222#7631..7867#7983..8200#8656..8917#gtgtgcgccgcgcggctgctgctgctgctttcgtctctcctcccccctccgctgctgcaaagcttccagaaagaaaggggaggagaaaggaggtggaaaagccaaaggcaaaggcaaaccacgcgtctctctttggtattcgtctctccatggcacgcgtcctccccctcagcatcgaggcgggggagatggccatgcccaggtattcttccttccccgagctctcgctgcaatctgtttgtttgcttgttcatcgcgttcagattgttggagttatttttttccttcgaaaaaaaggggaagtttggtggtgtgttggcgattttcttagtaggagaaaaaaggagtttgggtttagttggagccgacgatgcatccaaggtggtttgtttgggaggcttcttgttaatctgttcttttacaaattcaaaatagaatttttgtcggccgaaaattttggagaattttttgtatgccaaagattgcgggtgtggttgttggttttaagcctcgaggtcggttgcgttctcccaccaaagtgcaatagcattgcgtcatggcgtgtggtttgggcttattcggttctttcaattttccgtactccaagaggaaaacaaaagtggcatttatgcgtgctgtggcgtgcactttgttcttcgttgccgcttatccgccattagagagcccattgagccttttggtcacgggcgctgtgatgtgtgatgggcacgggttgatgttcccctcgcagcagtaccatgcacggacacggacacaagactcacggggtgttgttaactgtttcttcacctacgccccgttttttggaggccaatgtggcacatgaacgagcaagaagggcagcgagcatggagtgatccatttgggattctttcaaaatcgttgcaactcaagcgggagctattttgggaaatcttgcttaaccatgtttataacatcggttttttttactgttacagcttaaaaccatatctgaaattctagttatagcagtatttcgcatggaaagatggagtgtcatgattgagtgctgtctgttgctctttacgaaaccaatgttgtagggtgttgagtactgcagataaactgggaagaaattggccgctggcagtttgactagatatgtaaattaagtatacttgttgtattgtgttaaacaaatagaaaaatacgaactggaacatttgacctggttattcaaattttagatcaaggattgtcacatgtcaaatgttttgtctagttcatgccacattgctgtggtgtgagaaagatgacctgtatttcagtagaatagatatgcagttattgcattagttttagggattactgcactttattgtccaaatgtagcaccccgatggcatctattgattgagctatagatcgatgtacattctctgttcggtcatgaaatctagcacttcattttatcgtcgtcctcattttaccaggttctgtatggaaaagccatgtagattatcatggcctagaatgtgaagttttttggcagccaattttctctggaagcttcaccttctctgtattgctatccttatttacatatacatgactagatgggccctctagcagatgggccagcacataaaacacacacatactgttgtatttacagcccaacactccccctcaagatgggtgatagatatctatcatacccatcttgtcacatgaactattacactctttaacacctaaaccctttgtgaaacaatcagcaacttgtccaccagacattacaaattctaattccaaaactccctcatccagtttttccttgataaagaaacgatccaactccacatgctttgttcgatcatgttgaactgggttgttagcaatgctgattgctgacttgttgtcacaccacaatttcattggagtatccaccggcaacatcaactcagaaagaagattccttagccataacaactcactcaaactcactgacattgcccgatattctgcctcagcggttgagcgagacaccaccggttgcttcttgctcctccaagatactagattgccaccaacaaacacacaatagcctgaagttgatcttctatcatcaggacaacttgcccaatctgcatcacaatagccttcaacctccaagtgtccatttttcttaaaccataggcctttacctgggcttcctttcaaatatctcaagatcctatagacagcatccatatgcccactccttggatcatgcatatatcgactcaccatactgacagcataagttatgtcaggtcgtgtatgacataaatatatcagtctcccaaccagcctttggtatctttccttattcactggatttccagactctgcacataacttatgattttgatcaactggtgtagaggctgggcgacatccaagcatacctgtgtcactgagcaagtccaatgcatatttccgctgtgaaagaactatccctctaggagatcttgcaatttcaatacccagaaaatatttcaactggcctaggtccttaacttcaaattctttgcttagattttgtttcagcctagttatctccgagcaatcatttccagtgataatcatatcatcaacataaacagcaagaatggttatatgatctccactatgatgatagaaaactgtgtgatctccattacattgtttatagcccatagcacacattgcacgcctaaatcgatcaaaccatgctcttggcgactgtttgagaccatataaggatttcttcagtctcaatactttacctttagtttgcaaagtagcaaatccaggtggaatttccatatatacctcctcttgaagatcgccatgtagaaaagcattcttgacatccaattgatgtaatggccaatcaaagttaactgcacaagatattatagttcttaccgtactcatttttgcaaccggtgcaaacgtttcatcataatcaattccatatgtctggctatatcccttagccacaagtcttgctttgtacctctccacttttccatccggattttgtttcactgcatatacccacttacagtttaccactttctttccattgggataggatacaagatcccatgttttgttcttctcaagagcttctagttcatctagcattgcttgatgccaccttgggtcttgctttgcctctttccaatccttaggaattatagctgaatttagagatgccacaaaggccttgtatgtcgatgacaaggaagtgtaagatacataattggctatatcattctcatcaccactttcatctccaatttcaaaaccatatctttgtggaggtttgcctgcattgcttctcatcccctttcttatggcaattggcaagtttgattcttcttctctaatttctatttgttctccccctgactccgaagacacttgcacatgagtaagatcatctgatacttgatcatcaacttcaacttgttgagttgttggaagtctcattctccttgtgtaaacttgaagattttcctcttcatgtggctttctccattcttgttcttgtacaggatcacctatagcacatggaatttcaccaaccacaatctttccctttgattgttcattctccttgagacccaagatttcaccttccttttgttgatcatggtcacctctagttaaatcatcaagatcaacaaataaagagcttatatctgttttctcaccatagaatggaacagattccctaaacgtaacatccatacttacaaatgtccgccgttctgatggactccaacacttataccccttctggctggatgaatagcctataaagatgcatttaacagctcgaggatcaagtttcccaatagatggtctatgatctctaacaaaacaagtgcagccaaacaccctcggtggaaccacaaattcattcttcccaaatatcatctcatatggtgtcttcattccaagtattcttgatggtgtgcggttgatgagataagctgccgtcattactgcctcactccatagaaatttaggtacattcatagtatacattagtgaccgagctatctccaaaagatggcgattttttctttcagccactccattctgtggaggagtatcaggacaagaagtctgatgtaatattccttccaaagaaagaaagtgaccgaattcactattcatatactcccctccattatcagttctaataaactgaacccgagcattaaaatgatttttaatatatgcataaaagttttggaagcatttaagcacttcatccttatgtctcatgagatataaccatgtcatgcgggaatagcaatcaataaaggtgacaaaatatttcattccactcatagaaaccacaggcgacgtccacacatctgagtggattagcataaagggcaaaatactgcgaagtcctctactcacatatgatgttctagtatgcttcccatactcacatgcatcacatatcagcatatgtttatccactttactaaactctaccgggaacattttactcataatttcaaaagatatatgtcctagtcgacaatgcaaaagtaatacctcagtcacttctttacttgttgaagccattagtgcacacacatcctcatttgtccctcttctgtccaagtaccaaagtccatcacgcctgataccaatcccaagtttcttccctgttcttctctcctgaattaaacaattctcacgatcaagggaaacccgacaatccatattatcaacaagagaacttattgaaattaaattcactggaaaagaatggacatataacactgatgacaaagtaatggatggagtacattgcactatgccctcccccttaacctgacatgatgtgccatcagcagtttgaatggtctctttatgtgcaaatgaatatggtttatatgatgtaaattctccactcatgccagtgacatgcctggatgcacctgagtctaatatccaacttgaatgagaagtgttcatagacataaatgcttgattaaaactacctgaagtagaatgagcaaagttggcaacattgtcaggtgtagtcccggaagaaccctcttctagagtaactgcattagccttgtaatcacctctatatccataacctcttcctctattgctcctaccagcatagcctcttccacctcttgttccacctctatcaacacctcttcctctcccataagtaggcttgcgtggagcatgacaatcacgcataaggtgtcccatttcaccacaattgaagcactctctagtctctttaccttgtacaattgcataggtgggacttggtgaacatggtgcggcactaggcaatactttcttcttaagctcctcctgtgccatagctgcaatggcctcatctaaggtaggaagagtggtttggtgaaacattgcatctcttcttccttcgaactctggatttagacccttcaagaactcaataacccttctacgctcaacccatttcttcatttttgctatgcaatcagagtgctctaatccaagaggatcataatgatctaaatcggaccacaaactcttcaactctgcgacatattctgccacagagcgctccccctgtctcaaagcacttatcttctcttgtgcctccaccattagcatcacattaccttctcctgagtatagtttagtaagagttttccacatctcactcgcactagagatagtctcaacagttgtagcaatagctgggattaatgaagtcaacaaccatgccaccactaaagagttggtagtgctccaagtcttccattctacacttgatgtgttctcaggctccttcacttctcctgtgacatatccttctaacccctttgtttttagtattagtaatgccctccttgaccaactcaaataatttttgacaccctccaacttgatttcgttttgcattaactcaatcttcagtattgattcagtatgagggataattgcattgcttgtagttgaggcctcactaaattttttcgctagcatgtccaccaatttacccatcacttgttctattccttgattttctgccataatgcaaattctgaaactgcaaaccagtagaaacccaactagcagatctgagccccctgttctacctttcccttcctatagattgctcaaatagtcaatatcacaaaagcagtagctgtgcttttatctcggtttccttgccaatcacacacccacaagagatgcaaagtcttcactgtgctgtgaccccgccactacagagcaagagccacttcttcctgaggagcaccaacaccagctgtttaccagcactttctttcttgcctcagcccaaagcagctctgcacctgcgagctcagccccaagcagcagcagcagctccgcacctgcagctgctcggcttcttcctcctcgacgcgccgcgctggccccgctcttccgcgccgctgctgatgcgcactctctaccctgctcaagcctccacgcctccggccagctagggttcagccgtcgcctgccgccggccggtcggctctgataccatgaagttttttggcagccaattttctctggaagcttcaccttctctgtattgctatccttatttacatatacatgactagatgggccctctagcagatgggccagcacataaaacacacacatactgttgtatttacagcccaacagaatgtgagatcaaatgacaaagatatgagccatgcttgtgaatgtgagcatatcagattaatttttgttgcacatcttgtttagatttaatccatacaactaatttccatgcttttccagtacacaaaacaaaacaagcacatggcatctttacttcaatgagataaattgataaaatttgttacatgttttgagtaacttcttattctaatctgcttggtttgtaaacagacgtgaagaggtagttacagacatgccaagctcttccgcagtggcatcaggcaacggaatcgaacaacctgagcaaaacacaaaggatgatgaatatgaaaggctggtcagaccagctcatagtgtaatagctgatgataacacggtagtcctacctgaagaacctacctcaaggtccatttggtggatgaaagttctgcttggctgcttccttcttatattagtatcttatgtcttcgtgaaatggggagtcccctttgccttcgagaaggtgagcatcaagggtaatatttgtcataggttcataggttgaccaagtactgaaatcttgacttgagttctttttatggtttgtcggcagaggtttctgcttatgaaacctccactaccatgcattagtggaggtttctgcttatgaaatttcaaactgttgattgatagtttgactagtccatatgttcccatgtataccctagtttatgcacaccagttggaatgctagatgaatgtatggttaatggatgcacggctgtcacaatgcaatttaatttcaagtttacaaaattttcaattatctcttgtttttgtaccatgttgtgccagataggagtaacattttaatcatattcattttccagaaaattgtttggacttatgttggaagatctgtttgttgtaggttctcttgccaatcatgcaatgggaagcaagtgcctttgggcgtccagttttggctgttgttctcgttgcatctttagccctcttcccagttactttagtcccttctggaccttccatgtggctagctggaatgatctttggctatggttggggtttcttgattattatggttgggactactataggcatggtggttccatattggattggctcattgttccgcgaacgtctgcatgtaaaaattctgaactgcatgttcttgtgatgtctattttaggacctgcatcttttttgaaggagctttgccctaattttctgctctcttcttccctctacattttttaatgcaggcatggttaaaaagatggcctcagcagatagctctaataaaacttgctggggaaggaaattggttccagcagtttagagttgttgcactattcagaatctcgccatttccatatacaatttttaactacgctgtaactgtgacagaaatcaagttcaacccttatctatgtggttcaattgctgggatgatacccgaggcgttcatctatatttataggttggttacatacctctccaatctgcagacatccaattttgctacctatatgtcctcactcactgtattccattgctgtttatttatcatgttgtcaacaatagtgcacctagtcactgatttttaatgaatcgctctttcaagcataagctcaccagtaaaacggtattggatatactagttttgcaagctatatatacatgaaaacatgtcagaaggtttgtgattgataacttattataaaagagtaaatttatattatataggaaaagttatctgtgcaggataactatctttacaataactttagcaattcagtagtgtatacacttgcagttaatcaactaatgcaggtcaccgacacatgcaattttctttcaggagttactaagtgcactaggtatggtgttcagtgatgcgcttttgattgttcatctttctatgttttggtgcagcgggcggttgatacgcacattggctgacatgaagtatggcaactacaagatgacaccggtggagataacatacaacgccatctcgttcgtcatcgctgttgtcctcacggtcgccttcacggtgtacgccaagagagctctgaatgacataaaagagtcggaaggtattttaacagaagagtatggcatatctactggccacaagaatccccatcaagagcgctccccatcacggcctgtaccattggatgatgttgtatgacggcgttgttctacagggacaaagtacatacggctgcttcagaaagggagaaactgagaaagtaggatattcatctctcgtctgcttttctccagcggaagaagaggtgtagtgtaggtaggctaattgcataaggtgaatgcacctgtctaactcaaatacacgccctaactaaggttgttgattcattgcgtgcactgttgttggctagaggttttcgtctggcttctgttgggttgggaatgtagaggatagcactggcatgtcaactgactagtgattgctggtgtctgtctgtactaggtgatcttgcagcaagtgtactagcatgtctgcatgcttcaccttcgtgaaaatgtcgattcttttctccctttgttccttttctttggcaaatatacagatatcttcattttgcgacgagaatatactgtgccatgggaaatggtactgccgtagcacttggatttggaattggccgtgaccatttcccatggtttatacaaaaacaggagatctcttctgttattggaattggccgtgatcatttctcacgagatctcttctcatgctttgtatacaaaaaaataacataataaaggaccattactgttcttgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0374400, RefSeq:Os03g0374400