Os03g0374600

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Revision as of 12:40, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0374600| Description = Glycoside hydrolase, family 17 protein| Version = NM_001056749.1 GI:115453226 GeneID:4332950| Length = 7939 bp| Def...")
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Gene Name

Os03g0374600

Description

Glycoside hydrolase, family 17 protein

Version

NM_001056749.1 GI:115453226 GeneID:4332950

Length

7939 bp

Definition

Oryza sativa Japonica Group Os03g0374600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15310848..15318786

Sequence Coding Region

15315700..15315766,15316681..15317643,15317746..15317773,15318125..15318503

Expression

GEO Profiles:Os03g0374600

Genome Context

<gbrowseImage1> name=NC_008396:15310848..15318786 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15310848..15318786 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgttggacagaagatggcggggaaccatacttttgctcatctgtcttgtctgcaatgcatcagggacttatgttggcgccaacacgatcccttcgccggagaactcgccgtcggagttcgccaagattgttcagtctaagcagacgaagcatgcgcgcgtgttcatcggcggcggggaccatcggtcgctgcgatcgctggcgaacaccggcgaggaggtgatcctcaccgtgcccaacgaccagctcgagcacatggccgagttcccggaggaggccgagctctgggtcgccgccaacgtcgcgcggttcctcccggcgacgaggatcacgcacgtggtggccggcgacgacgttgtggccaggtcaccggggaacgcgtacttcctcctcccggcgatggccaacctccacgccgcgctcgccgcgtcgcgcctcgacggccgcgtgaaggtgtcgagcgcggtgtccggcgccgcgctgcaggctcccccggcgtgggccgccgccgccgtggcgggcggcctcctccggttcctgaacgccaccggcgcgccgctgttcctcaagacccggccgtcggagtccacggacaccatggtcgacgcggcctacggcgcgatgcgcgcgctggggttccccgggggcgccatcccggtgatcgcggcgccggtggagacagaagaattcggcggtggcgcgacgacggtggtgtaccacagctacctgctgcaggcctccggcggcgtcggcggcggcgagaggcggtcgctggcgacgtcggcggggatgttctgcgtggcgctgcagaacgcggacgcggcggcgctgcaggcggggctgaactgggcgtgcgggcccgggcaggcggactgcgcggcgatccagcccggcggcgcgtgctacaagcagaacaacctgccggcgctggcgtcctacgcctacaacgactactaccagaagatggcgtccaccggcgccacctgctccttcaatggcaccgccaccaccaccaccgccgatcccagctcaggatcatgcgtcttcacaggaagctcgatggcaggaggctcgaacacgagcgtgccgggagccagccctccgacgacgctctccccaccggcgggcctcacgccgccggtcggcaccagcccaccgaccgacttcagcccgccggcggccggcacgacccctccggccggcggcttcaccccgccggcgggcggcttcggcaccccgccgctgggcgggttcggcacgccgccgtcggggttcggcccgccggggagcttcaacgggagcggctcgtcgttcgggcccagcagcgccttcagcccgtacggcggcgccggccaccgcgacggcggcgcctccggcgctcgcctcgccgccgctgccctcgccgtgctgctcctgtccgtcgatctcatgtga</cdnaseq>

Protein Sequence

<aaseq>MMLDRRWRGTILLLICLVCNASGTYVGANTIPSPENSPSEFAKI VQSKQTKHARVFIGGGDHRSLRSLANTGEEVILTVPNDQLEHMAEFPEEAELWVAANV ARFLPATRITHVVAGDDVVARSPGNAYFLLPAMANLHAALAASRLDGRVKVSSAVSGA ALQAPPAWAAAAVAGGLLRFLNATGAPLFLKTRPSESTDTMVDAAYGAMRALGFPGGA IPVIAAPVETEEFGGGATTVVYHSYLLQASGGVGGGERRSLATSAGMFCVALQNADAA ALQAGLNWACGPGQADCAAIQPGGACYKQNNLPALASYAYNDYYQKMASTGATCSFNG TATTTTADPSSGSCVFTGSSMAGGSNTSVPGASPPTTLSPPAGLTPPVGTSPPTDFSP PAAGTTPPAGGFTPPAGGFGTPPLGGFGTPPSGFGPPGSFNGSGSSFGPSSAFSPYGG AGHRDGGASGARLAAAALAVLLLSVDLM</aaseq>

Gene Sequence

<dnaseqindica>4853..4919#5834..6796#6899..6926#7278..7656#gctcctccctgctcggttcgcagctgcagcttcagcttcagttgctatctgctggctggctcatcagctccaagaacacagtaacagaggagagtgcttagcataaattagcggcagttccgaggccaggcttttcgtccgggcgaagcgaaacgaggagagatccgaggctgcgagctgggagagctctctgctactcccaggtacatacagccatcagtgaaattccagttgttgcagcatgaaatcattcgttcgttcatggtgatttactctgttgtttctgcttcttgtttctgttcctctcgatcgtcgggtaatcgatcgtgttgcccggtttctgtattgctatctgctgaattatactagttcatcctcgttatgctagcgttgttaattcttatcagtatgatctaaccttttctcaatttcaaatttattgagcttcatttctcctatcaatcagctggctacttcatgtgcgatattcatattctgtcagtcaaagcgtttaatttggagcgattttattttcactgtaaaaatcctcgtagagctttgcatgggattctcgcatacccaataggctacttgaatccgagttgtccgtattactgttactccaccaatttaaactcgtagtatatttctagctggaaattttgtgatgattatttcatttcactctcgagcatcaatcagtgaccttgacgcttaaagcaatactactgaaattgatgaagatacgagagctacgggattaagtagagtacttttaaaagttgtttcttttttatcatatcatatctatcctttgatggggatagctaagcacttaatccgctaatcctgattactactgattttttttagagaagggtattttttacccgggctctacatccaaccagatatagacaatatttttaaattaggaacctatcaaatagaaaatatagccctcaaataactcaatctgaaattcgctcatatgaagatttgaagtcagaatcttggggtgctactactaagataaattttacggtacttgaggaggtactatgaggtaccacttttctattataaattaggaaagtggcccgcgcgtatgcgcggcacttatattattgaaaggtaaaattattatttattcaaaaattttgtcttatagattaagggcaaactaaagttcggataatgttattttataataatttaagggttctatttttcttaaggtatcttaaaaaaccattcaaaaactttttcttaaggtatgagttttaaatcatttttttctcgagtaaataagaaaccattgctagttaattatcatacagtccatctatatatataccgtatagtatggccacaaatgaaaaatgcgagagcaagatactcaaaattcttgtgattaaatcgtctcaagaaggcgcatgatatagtaagaaagggagggaagtgtatgcatggaaaaaaagaaaaaagggaaaaaagaaaaaagggaggggaagcgtacataaccatgtacgtaggtgtatacctatgacacgggacgagaggtgagaccttatagtattttgtttttttaagatcaatttaatctaacggtttataatattggacgtaccgattaagtgaaaaatcaagtaatggatactttgatttttttcccttagaatttctaatacgtggcagcttgagagcgttttaagaaattttaaaggacttaacacatgtaataagaatattaaccgcttaatatatatatgtatagggcatatggtaatatttgttctagcttcgtgcatgtttatatacatgttgagagaaattaatgatgtggctagcaagccattagatgtctaattagtagcaattaattttgacaccgattacagttgttcatagtagctcttacatattcatcttacgactttgattatcagttgatccctaatttactgatcaccatgactcgcataaaaaaatatgtactacttagggtttaggacagctgaaattgatgaattatcttatttatgtgatagctatttgagggtataaacgaataaattgacttataaaaagttaaaatgttgtttaaagagacgccatttagaaacttggaaagcgtgcaaacgaaaatccaactatgaaatcagggaaaaaaagaggatcttaaactcctttataacaccctagtctttgtaagagtgctattgatattcattaatattgtgctcacatttataacataatgaattctttcatctatacgaacaaatagtgcaaaatccaaatacgacataacacaatacgttataattattctgtaatcaactctcggtttcagcttaaacaaagctaagtgttagaaaaaaaacacaacccacagtgcttaattcttctctcgctgcatcacacctttaatttttttttcatgttattgacaaaattaatcatctccatatatgatttgatatgtggcaaaacggtagtgccagacatgatgctttgtcatgcgtgcaaaaggtaaaggtgcagatgtgcattgtgcagcgggcaaaaaaagagaacttcggacgttttatttattagcaaataatatatcaaatgatttaaataatgggtccaccggttatagtgtaagtgtacattagttaatatatattttaaattgttaatttaataggtacataatataatggtgtagactttattttgaaaccatgcattatttgagaataatagtccaatgtaataaaaaaatagttccgataatttaagtaatgggtccatcggtttaagtgcacgtataaatcaattaatatagatcttaaattgtttatttgataggtacacaatataattgtgtaaactttattttaaaatagtgcattatttgaaaataatagtacaaaataatgaatacacatgtttaagtggaaactatattacattattaatttaatggtcacatataatggtttaaattttattttcaaaaattgtagagctaatttagttaccagtgagttgtatgatggtagattctttgtgttgtaaatttatgattatttaaaaaggtatatatccatattatataaatggaaaagaagaaaaaaaaagaaaagaaaagaagggtgtacatacatggtacgtacgtatatatatacccacgtacacatgcacgggagaaggaggagaggtgggaccccatagtatttggtttgttttaagattaatttcatttaacggtgtataatattggacccaccaatttaagtgaaaatcaagggatagatgttttgcttttttcttagaatttctaggattttctctaatttattagagtgccacgtggcagcttgagagcatttgtaggaagtttaatggacttttatgattatttaaaaaggtatatatccatattatataaatggaaaaagaagaaaaaaagaaaaaaaaaagaaaagaagggtgtatgtacatggtatgtacgtgtatatatatatacccacgtacatatgcacgggaggaggagaggtgggaccccatagtatttggtttgttttaagatcaattttatctaacggtgtataatattggtcccaccaatttaagtgaaaatcaagaggtagatgttttgcttttttcttagaatttctaggattttctctaatttattagagcgccacgtggtagcttgagagcgtttgtaggaagtttaatgaactttagtatataatagatagatagatagatttggtatctcatagtacctaggtatcaaaatgtaccaaattgtagtaattcacgttacattctcaataaccgtaaaattatttactactaataattgttttagcttaggaaattgttttggatcattcatggtcaacccaataagacgcggacacttggcttcaagactagcctagttcgtgtcgctctgccgatgacaccaggcagcggtgatcgatcagatcaccggctgggtccggcgaattcaagtccatcttcttcttcttcttctttcttcgatgtgtgtcgtgtcgcatctcaattattttccctgcttaatttcttcatgacgtcgccatgtaggactagtagggttgtttggtgagtatacggttccatctctcgaagcatctccaaggctacaatgtatggcccggccgacctcagataacgcagcatccgtattatgaatattgctgtgtttgttctgttctgttctgaattctgatccaacaacgtcccaactaccggacttattcagaggacatggaacttctcgctgaatcggctggaaattccatatccggacatgctttcttttcagattcgttgtactatgaagtatatgtcctattcgatactaggttgctatattactaagtagaaaatcatcaaaacaatgcatggggctggttgacatgtattgttcttatagagttggcatgtaattgctaagggttgtgtgaacaatgatggagaatttgataggaacttttttgtaggattttattatattgtagtcttttccttgcaagtcctttagctttgcttgcactttgcaagaggcactttcttttgggtattcttcttcttttttgcaagggggtattgccccattttcttttgggaattttgtgctttagttcatgaggatctggaaacaggtcatttttcccctgactccaaaatgagcatgcaatgatgcaagcgtccaattgcaaatactttctataatcttctggaattctctgatggtattgctaggttcaacaggtccaagaggtgcatcaagaagttgcccttcctgtagcaccatctatcatcaatgatgttggacagaagatggcggggaaccatacttttgctcatctgtcttgtctgcaatgcatcaggtatgtgcactctgtagtagcaaaagtagcattatcatttactaattagtactccgtatcagttgttctcttgttagtttttgcttcagtttcagttaacaacagaaccaggttcctttctcactttctttttcatcactgagattctttacaaaaaaaatgaacatacatgcctaaagtgcagaacattataggagacttttaagctagtacaaagttttctgatatgcttgtgcttttccccactttgcatgccttatcttcagtcacaaaaagcatacgccatacatgtgacatctagaaacttatcagttatctcatgcttaagaaatagtagaatggtgcgaataatatatacttagccaatgatttgtttgatacaacccaaatcatatcagtcagctgtgagaaaacaaacattcaaatactgaacactctgaaacctgaactgtagccagttctgatctttcatgcagcaggtcatgttttctttccctgatgacagcaaatgattccagggcttcatgatctaacactcttaatctaacaagagtactatcattctatgcattatttgtatgaactatgaagtgcacaaccatcatgtactacaaccaagtaccaacatggattaacaggattaagtactagtctgaaccaactgtactttcatatctttctgcacttcgtcagtaatcagatattcagaattcaaaaccatctgttgtgtttgcctgtcttacactaaaattttctgctccaatcaattactaacatggattaacaggataagtagactagactgaaccaactgaacttttatctttctgcacttcgtcactaatcagaaattcagaaatcacctgttgtgtttgcctgttctacactaaattttctgctccaatgatgagcagggacttatgttggcgccaacacgatcccttcgccggagaactcgccgtcggagttcgccaagattgttcagtctaagcagacgaagcatgcgcgcgtgttcatcggcggcggggaccatcggtcgctgcgatcgctggcgaacaccggcgaggaggtgatcctcaccgtgcccaacgaccagctcgagcacatggccgagttcccggaggaggccgagctctgggtcgccgccaacgtcgcgcggttcctcccggcgacgaggatcacgcacgtggtggccggcgacgacgttgtggccaggtcaccggggaacgcgtacttcctcctcccggcgatggccaacctccacgccgcgctcgccgcgtcgcgcctcgacggccgcgtgaaggtgtcgagcgcggtgtccggcgccgcgctgcaggctcccccggcgtgggccgccgccgccgtggcgggcggcctcctccggttcctgaacgccaccggcgcgccgctgttcctcaagacccggccgtcggagtccacggacaccatggtcgacgcggcctacggcgcgatgcgcgcgctggggttccccgggggcgccatcccggtgatcgcggcgccggtggagacagaagaattcggcggtggcgcgacgacggtggtgtaccacagctacctgctgcaggcctccggcggcgtcggcggcggcgagaggcggtcgctggcgacgtcggcggggatgttctgcgtggcgctgcagaacgcggacgcggcggcgctgcaggcggggctgaactgggcgtgcgggcccgggcaggcggactgcgcggcgatccagcccggcggcgcgtgctacaagcagaacaacctgccggcgctggcgtcctacgcctacaacgactactaccagaagatggcgtccaccggcgccacctgctccttcaatggcaccgccaccaccaccaccgccgatcccagtaagctccatttcttctgtaatacggagtatttcactccctcctcggtcactgaatttttgctgaatttaatttttttcttcttcttttgaatactctcaggctcaggatcatgcgtcttcacaggaaggtgagtgagctcaaatgtggaaattcttgaacaaatcagccacatattacattcatacgagagtaaattttactttagacatgttttattgccgatatttcatattcgtcaatgaacttcaatagctatatgtaaccaccatttttcagcatataataaattggatatagattgataaaagagttgaaaatgatctagagtatcataaagataaaaatgttaaatgtttaaaggatagctgaaaacgaaacgtgaataataaaagattgtttgaaatttagcttttcaaattagcaatgcaagaatgcgacaaggataaatatcatatttatttctgtttactttgtgcagctcgatggcaggaggctcgaacacgagcgtgccgggagccagccctccgacgacgctctccccaccggcgggcctcacgccgccggtcggcaccagcccaccgaccgacttcagcccgccggcggccggcacgacccctccggccggcggcttcaccccgccggcgggcggcttcggcaccccgccgctgggcgggttcggcacgccgccgtcggggttcggcccgccggggagcttcaacgggagcggctcgtcgttcgggcccagcagcgccttcagcccgtacggcggcgccggccaccgcgacggcggcgcctccggcgctcgcctcgccgccgctgccctcgccgtgctgctcctgtccgtcgatctcatgtgaagttcgtttctatttgtgtaaatttgggaatcatgcgttgtgatgttgctctgagaaattgctggtctctgtaggcggcggattgaaattatgcatacgaaaaattaggagtttatatatatatatgtaattatgcatgtatagtatatatacttgatcagcatggacattatctaaaaaaatatgtgctagtcagtcgctgacaatttctgttcttcgacctgtcagttaatggttatacatgtacatgccactagcctcacgcatggttgagttggatctg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0374600, RefSeq:Os03g0374600