Os03g0376800

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Revision as of 12:40, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0376800| Description = KH domain containing protein| Version = NM_001056757.1 GI:115453242 GeneID:4332959| Length = 4476 bp| Definition = ...")
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Gene Name

Os03g0376800

Description

KH domain containing protein

Version

NM_001056757.1 GI:115453242 GeneID:4332959

Length

4476 bp

Definition

Oryza sativa Japonica Group Os03g0376800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15423081..15427556

Sequence Coding Region

15424361..15424409,15424602..15424660,15424742..15425008,15425095..15425352,15425445..15425867
,15426180..15426752

Expression

GEO Profiles:Os03g0376800

Genome Context

<gbrowseImage1> name=NC_008396:15423081..15427556 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15423081..15427556 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttggacctgggcataggaacagtcacgggaagcgtcactctgattatgctgaaaatggaggtggcaagagaaggaatcctggtgatgatacatatgctcctggtccagatgatactgtctaccgctatctttgcccttctagaaaaatagggagcatcattgggaggggtggagaaattgctaagcagatgagggccgacactcaagctaagataaggattggtgagagtgtatctggttgtgatgagagagttatcacaatatttagctcaagcagggaaactaataccctagtagatgctgaagataaggtttgccctgcccaagacgctctctttagagttcatgaaaagctatccatagatgatgatattgggaatgaagaaagtgatgaaggtttagctcaagttaccgttcggttgcttgtgccatcagaccagattggatgcattattggaaaaggtgggcatattatacagggaatccgcagtgacactggtgctcatatacgtgttcttagcaatgaaaatctccctgcgtgtgccatcagtggtgatgaacttcttcagatatctggggactcaacagttgtcagaaaagctcttcttcaagtgtcatctcgtctccatgacaacccatctaggtcacagcatcttcttgcatccagcatgacacagccttatccagtgggctcccaccttggtagttcctcaactgcaccagttgtggggattacgcctttaattagttcttatggaggatacaaaggtgatgtggctggagattggccttctatatatcaaccacggagggaggagagctctgcaaaggaatttagcttgcgccttctttgtgctgcatcaaatgtgggaggtgtaattggaaagggtggtggaattatcaaacagattaggcaggagtctggagcctttatcaaagttgatagttcaaatactgaagatgactgcataattactgtttctgcaaaggagttctttgaagatcctgtctccccaacaataaatgctgcagttcatttacaaccaagatgcagtgagaaaactgatccggaatcagcgatcccgtcttacacaacacgcttgttggtgtcgacatcacgtattgggtgcttgattggaaaaggtggttcaatcattactgagataaggagaacatcaagagcaaacatacgtatcctttctaaggagaatgtaccaaaagtagcagcagaagacgaagagatggttcagatcagtggagaccttgatgttgtaagacatgctcttctgcaaataactactaggctgaaagccaatttctttgaaagagaaggtgctttatcaggtttcccacctgtaatcccttaccatcctcttccagttggtgtttctgaagggccaaagtatctaggcagagatactaagcctcttgggcatgattatccatattcaagtggatatcgtggctcagatgatattggccctattgacagctatgcaagttatggcagctcccaggtctctggaggaggttatggggcttatggtggatatagtggtcgttctggcagcagtgggttatctggccctagttcattttcctatggaaagcgacatggttattag</cdnaseq>

Protein Sequence

<aaseq>MVGPGHRNSHGKRHSDYAENGGGKRRNPGDDTYAPGPDDTVYRY LCPSRKIGSIIGRGGEIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDA EDKVCPAQDALFRVHEKLSIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHII QGIRSDTGAHIRVLSNENLPACAISGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQ HLLASSMTQPYPVGSHLGSSSTAPVVGITPLISSYGGYKGDVAGDWPSIYQPRREESS AKEFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKVDSSNTEDDCIITVSAKEFF EDPVSPTINAAVHLQPRCSEKTDPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRR TSRANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLKANFFEREGALSG FPPVIPYHPLPVGVSEGPKYLGRDTKPLGHDYPYSSGYRGSDDIGPIDSYASYGSSQV SGGGYGAYGGYSGRSGSSGLSGPSSFSYGKRHGY</aaseq>

Gene Sequence

<dnaseqindica>3148..3196#2897..2955#2549..2815#2205..2462#1690..2112#805..1377#tccgctccttgcgccatctcgcggctgaacaggggaggggcggcgatctccatccggcgagcggagcaggggaggggaggggatcttggtgagcatccatctgcattctctttctgattcatctatctctctcttccaccgggattgcacctccgtggaatttgcttgcgttaaccctagcttctcttatagatctggaagaggttcttctatttgatttcagagccttaaccttaatacaagtaacagtttgtttgttccccccaatagtttgggggttcaactgaacccccacgtcccaagttggatccgcccctgattcgcgtggttggagtgttttggttagaattttttttttgtcgggatatctttgttagttcttcaacttaataataattgaactgtaaaaaaagagtcggagaggttatcatgaatagaccaaacaatttttattttttctcgttagatcttttatagtaatctagttggtaggatcgaaagatgacttttgttcattgtggtatgggattgatttgttcatgtggattcgtttaacgcttggccatgataaacatgccatcatgcagccatacaagtgtaaggattattaatatgtgctgtcattacgaatttgacagggtgattcgtgtgattatagttgattttatttggtaaatgagaatttcaggagggtttgatgtgaataatcttagaatagcttccttcttgcgcgttattttagtttccatttatttgacccaatattctctactgtgttgaccgttctttctccgattgtagacaatggttggacctgggcataggaacagtcacgggaagcgtcactctgattatgctgaaaatggaggtggcaagagaaggaatcctggtgatgatacatatgctcctggtccagatgatactgtctaccgctatctttgcccttctagaaaaatagggagcatcattgggaggggtggagaaattgctaagcagatgagggccgacactcaagctaagataaggattggtgagagtgtatctggttgtgatgagagagttatcacaatatttagctcaagcagggaaactaataccctagtagatgctgaagataaggtttgccctgcccaagacgctctctttagagttcatgaaaagctatccatagatgatgatattgggaatgaagaaagtgatgaaggtttagctcaagttaccgttcggttgcttgtgccatcagaccagattggatgcattattggaaaaggtgggcatattatacagggaatccgcagtgacactggtgctcatatacgtgttcttagcaatgaaaatctccctgcgtgtgccatcagtggtgatgaacttcttcaggtttgtggaggatctctgtttccatctttttcccgcgttacacatgtcgtacatgcgttactactataggcatttatggctctgtttggtaacatgggttatttgtgacacgtccgcaacattctcttttacggagtaccctttttaaggtgcagtgacttagatttaatagtagctgttttcactttccagtcaaccagcaaaataacttttactagtttaatttatcatttacagtacttgattttttttgctatgccatctgtggaatagtcaataatgctaatgaaccctttattcttttggcactagatatctggggactcaacagttgtcagaaaagctcttcttcaagtgtcatctcgtctccatgacaacccatctaggtcacagcatcttcttgcatccagcatgacacagccttatccagtgggctcccaccttggtagttcctcaactgcaccagttgtggggattacgcctttaattagttcttatggaggatacaaaggtgatgtggctggagattggccttctatatatcaaccacggagggaggagagctctgcaaaggaatttagcttgcgccttctttgtgctgcatcaaatgtgggaggtgtaattggaaagggtggtggaattatcaaacagattaggcaggagtctggagcctttatcaaagttgatagttcaaatactgaagatgactgcataattactgtttctgcaaaggaggtgcttttctcctacggtcctctgctgatttagcatccatgcggatatttaattctagtcctgatcaattccgctttctctttctcatgcagttctttgaagatcctgtctccccaacaataaatgctgcagttcatttacaaccaagatgcagtgagaaaactgatccggaatcagcgatcccgtcttacacaacacgcttgttggtgtcgacatcacgtattgggtgcttgattggaaaaggtggttcaatcattactgagataaggagaacatcaagagcaaacatacgtatcctttctaaggagaatgtaccaaaagtagcagcagaagacgaagagatggttcaggtacaatttaaacttatgttttaatttttttttactggtcttttgtactgcgatgagttcaccaatgtaatttgcttgcacaacagatcagtggagaccttgatgttgtaagacatgctcttctgcaaataactactaggctgaaagccaatttctttgaaagagaaggtgctttatcaggtttcccacctgtaatcccttaccatcctcttccagttggtgtttctgaagggccaaagtatctaggcagagatactaagcctcttgggcatgattatccatattcaagtggatatcgtggctcagatgatattggccctattgacagctatgcaagttatggcagctcccaggtatagcttccctttcacttcccttcctttcctcttcatgctaacagactcttatcaaaacttcgactggaatttctccaggtctctggaggaggttatggggcttatggtggatatagtggtcgttctggcagcagtgggtaagcatacctgtactttatgagtcagcagtatagacagtacctgtcataataccaaatatttatgtttctctatgtatggaaattcactcttaagtgtgcactaattttttttaggcctagtctacttaatatttcattaatctttatatcatatgttttgctcacttagcacatttcatttttcatcaggttatctggccctagttcattttcctatggaaagcgacatggttattaggacttagattgacaaatgcaacaggtatggttcatccaccttgtcttgaaatgaacagaatgatcatgcgatcaagacttgctccttattgcatttctgccttttaaacacatttaacccagctcagctatcttctgatggacctgttcttttcacctttgccccatgcccacctcccttactaaaaacagccaagacaaaagaatgccaagaccaatgaagtatggagcctgcttattggagccccttcccaaaccagatgaccaagagtatggccccaacctggaagctttgcctaagagggacctgcctggatgccatagaccatcttatttccctagtatacagcatttacttatattttcctctgggactatgttgattccccgtcttacatgttctaaacctatgtattgaaagttcacagttgagacttcctgtatgtgttctcgtgcaacctgcttcatcttagtagttcgtgtggaagaacttggttccctgtttgccaaccaaaagcctagaagttacttgcccttgctttaaggatgtggatcgtgtcatccttcacattcgttcctatctgcacatagttccccagagaaaattgtacctcctcagtgagctcaaaataggctaacataaaacttaagtttacctataaaccaatctcagcatggtcttctagtatcaacctgtctggtaagctatatgactactatggcgatttacagttagctggaagttttcgcttttgctgatttatagatcataaaagccctaacatgcaattgtgcaagccatgctatacatgggatcttgacttgatgtgcacgtgtgctctgatgctcaatctgagtgtgggtaagtttcagagaacctctcaaagttaataactgggttgagattttatcgagttaagagtttcctttgtgttttggagtcttttcctcttctttacccttctcatggaggtgcaggagcatacgccgtgtgctgctactgcagacttgtccactgctatatggaaccactgctggagttgcagaacgttggtgccatgccatgcagggcatttgttagtgtattgctgtagactatgatacattttcgatgtaggcggtaacatggcaaacagtattgtgctgctttcagtatatttcttttttttggccaaatttgtttatgcatgtaaaagcaattctctcaacattgtatttgaacagtttggtcgaattagccgatcattcttatgtactgattgatgtccactgttgttggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0376800, RefSeq:Os03g0376800