Os03g0379400

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Revision as of 12:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0379400| Description = Conserved hypothetical protein| Version = NM_001056770.2 GI:297600998 GeneID:4332973| Length = 2521 bp| Definition ...")
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Gene Name

Os03g0379400

Description

Conserved hypothetical protein

Version

NM_001056770.2 GI:297600998 GeneID:4332973

Length

2521 bp

Definition

Oryza sativa Japonica Group Os03g0379400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15552987..15555507

Sequence Coding Region

15552987..15553012,15553503..15553683,15553763..15553952,15554978..15555507

Expression

GEO Profiles:Os03g0379400

Genome Context

<gbrowseImage1> name=NC_008396:15552987..15555507 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15552987..15555507 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcactcgctccggcgcgccctccgcgtccccacctccgcctctggcctgcgtcgcctctcctctaaccgccgcgcgcctccgccgtcgcgagccgccgccggcgccgccaccgcgaccaccggcgacgacgagtggaacgacgcctgggagacctcatggctcccgggcgactcccccacctcttccccggcgcccgccgcgccgtgggagtcccccacctcgggggccgccaccgtcccggccatctccgcggaggtggaccctgacaccaaggccttcgtggccgacatggacgagcgctgggccgagcgccgcgccgcgtcgaggcggccgcgccccgctcctcgcgcggagggtgcgggcggcgccgcggccaagaaggcgcaggccgacgagtacagggcgaggaagcagcgggtgcacgccgcgctgtgggtgaaggagatcgagaagatggaggaggcgcgcctcggcggcggaggcggcggcgccgacgacatcgaccgactcctcgactcgtgctctgagattttcgattctggaaatacagattttggcgattcaaagattccaagcactgctgagatcaaaaccaagcctgatggttgggaaaccacctctagaggacaggatggtagcatatgggatatctcacagcgggaagatgacattcttctccaagaattcgaaaggcggattgctttcagtaaacagcagattgctagcttcatcaaaacacacatatttagccggaggcgtcctattgacggatggaagtacatgatcgaagaaattggccctaatgctagaaaagggaaggggagcgtacagagactgcccagtgtgactgatcctgctactcagccgtacagggaagagccacctgcaattgcatctgtagtatatcctctaggctcaaagtga</cdnaseq>

Protein Sequence

<aaseq>MHSLRRALRVPTSASGLRRLSSNRRAPPPSRAAAGAATATTGDD EWNDAWETSWLPGDSPTSSPAPAAPWESPTSGAATVPAISAEVDPDTKAFVADMDERW AERRAASRRPRPAPRAEGAGGAAAKKAQADEYRARKQRVHAALWVKEIEKMEEARLGG GGGGADDIDRLLDSCSEIFDSGNTDFGDSKIPSTAEIKTKPDGWETTSRGQDGSIWDI SQREDDILLQEFERRIAFSKQQIASFIKTHIFSRRRPIDGWKYMIEEIGPNARKGKGS VQRLPSVTDPATQPYREEPPAIASVVYPLGSK</aaseq>

Gene Sequence

<dnaseqindica>2496..2521#1825..2005#1556..1745#1..530#atgcactcgctccggcgcgccctccgcgtccccacctccgcctctggcctgcgtcgcctctcctctaaccgccgcgcgcctccgccgtcgcgagccgccgccggcgccgccaccgcgaccaccggcgacgacgagtggaacgacgcctgggagacctcatggctcccgggcgactcccccacctcttccccggcgcccgccgcgccgtgggagtcccccacctcgggggccgccaccgtcccggccatctccgcggaggtggaccctgacaccaaggccttcgtggccgacatggacgagcgctgggccgagcgccgcgccgcgtcgaggcggccgcgccccgctcctcgcgcggagggtgcgggcggcgccgcggccaagaaggcgcaggccgacgagtacagggcgaggaagcagcgggtgcacgccgcgctgtgggtgaaggagatcgagaagatggaggaggcgcgcctcggcggcggaggcggcggcgccgacgacatcgaccgactcctcgactcgtgctctgagtaagttgctgctctaattttttccccccttagacaaatttgcgatttaaactgtatttgcctgccaaaatgtcgcttgcatattatttgattcctcgttgtgcaccgcacttggtggtggaatctggagctgatagaccatgaatctgtatcaaatttcagctgtattttataagttagataggtattgtgttagactgtcgggcaatactatgaattatggctagttcatttgtagctagagcctggaaaagctgtgatttccttttcatctggtatagttgctcattggtgaaactctgatatgtttgataacttgggacttgaatagtgtatattatgcctccgattatttttttgatgcatagcacctgctgcatgtcaaattgataacctttttgttgcatgatgtacaaattaaatgttgatctggtgtggttcattcaaaatataaccgtgttgcatatattgtttatctccaagcttccaatgtagcagcttggtttcacaaattatgcgtactatgtgaatttcttctggatctagtacagttcacatctttcaccctcaaatttatttttttctcaaaaaataggaagtactgtgcttcgatgtttacttgattttgcttaggaacaagcatatgttagcgtcatttgctgctcaccatttagttgatagaagcaggagcatttggaatgacattagttatgcagttttcttttcatttgctacaattgcttagtaatcagcatatcaggcattaaaacataaactctcatagtctcggtattatggcagcactccaaaactcctaatgctactgtcagtctatttgtcatttttgcatatcttcctgccataacaattttttgctgcatgattggggaggctttatggcttgtacaatgttttagtttccgtaagctcttggttttgctaagttaggaatgcatatttttcatgtgagcaaaatgcttagcaatctataacacgtagctggcttataattttgtgaaatacaggattttcgattctggaaatacagattttggcgattcaaagattccaagcactgctgagatcaaaaccaagcctgatggttgggaaaccacctctagaggacaggatggtagcatatgggatatctcacagcgggaagatgacattcttctccaagaattcgaaaggcggattgctttcagtaaacagcaggtccacaatcactctctctccacaattttttttgtgttattctagttatttctgacatggtgttgaaatgcgactgcagattgctagcttcatcaaaacacacatatttagccggaggcgtcctattgacggatggaagtacatgatcgaagaaattggccctaatgctagaaaagggaaggggagcgtacagagactgcccagtgtgactgatcctgctactcagccgtacagggaagagccacctgcaattgcatctggttcgccattcagaggaaaccggccataatctctcgcgtatttccgttggtgtgtttgaagatgtatcagtagatacattatgtgcgaaaggacatggtgactttttccagctacggagtggagtagttcataaaattttgtacggattgttcttctgaataacagcaatggaaaatattcaagtgttcaatgttaatgctatactactatatatcagcctgtttggttgccaggtgctgcatagttgtattgagatgttgctggttcgtcagactcgatagaattgtgataatgttggcttggaggctggttacaggcgtatagtcttacaatttttgttctttcataacttttccttcgattgcaattatcgcataaatgcattttaattggacatcaatatttgcaaggggataaaacgggttctattctcactagagtttacagaaacaaaagggagattgaaatatttacatgcacatcattcagtagtatatcctctaggctcaaagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0379400, RefSeq:Os03g0379400