Os03g0381000

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Revision as of 12:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0381000| Description = Similar to Aldose 1-epimerase-like protein| Version = NM_001056773.1 GI:115453274 GeneID:4332976| Length = 1867 bp| ...")
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Gene Name

Os03g0381000

Description

Similar to Aldose 1-epimerase-like protein

Version

NM_001056773.1 GI:115453274 GeneID:4332976

Length

1867 bp

Definition

Oryza sativa Japonica Group Os03g0381000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15651520..15653386

Sequence Coding Region

15651707..15652573,15652767..15652816,15653123..15653336

Expression

GEO Profiles:Os03g0381000

Genome Context

<gbrowseImage1> name=NC_008396:15651520..15653386 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15651520..15653386 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgacgagcgccaggagcgtggcgtggcaatggttggccgtggcggcggcggtggcggcggcgtctctgatcggcggcacgccggcggaggcgaggaggggagggaaggagtccatcggtttctacgagctgcgtcggggcgagttctccgtcgtcgtcaccaactggggcgccaccatcctcaccgtcaacctccccgacaagaacgggcacattgatgacgtcgttcttggctacaaagatattggatcttacgtgaatgacacgacctacttcggggcgctggtggggcgggtggcgaaccggatcgccggcgggaggttcacggtgaaggggcatgcgttccacacgtacaagaacgacggcaagaacacgctccacggcggccaccgcgggttcaaccaggtgttctggtcggtccgggagagggccaccggccacttcccctacatcaccttctactaccggagctacgacggcgagcagggcttcccgggcgccctcgacgtgctcgtcacctacaagatcgacggcgactactccttcagcgtcaccatgtacgcccgccccgtcgacgacggcaagcccacgccggtcaacctcgcccagcacacctactggaacctccgcggccacggcaacggcaccatcctcgaccactccgtccagatcttcgcgtcggcggtcacccccgtcggcgccggcctcatccccacgggagccgtctcgcccgtctccggcacgccgttcgacttccgcgcccccgcgccgcccggcgcgcgcatcgccgacgtccccggcggcgggtacgacatcaactacgtgctcgacggcgaggccgacgggcagggcgtgcgcaaggcggcggtggtgagcgagcccacctcggggcgcgtgctggagctgtggtccgaccagcccgggctgcagttctacacgggcaacttcctcaagggcgacgagggcaagggcggcgcgcgctacgtgaagcacggcggactctgcctcgagacgcaggactacccggacgccgtccacaacgccaagttccccaccgagatctaccgcaagggccaggagtacaagcactacatgctctacaagttctctctcgccaagaagtag</cdnaseq>

Protein Sequence

<aaseq>MAATSARSVAWQWLAVAAAVAAASLIGGTPAEARRGGKESIGFY ELRRGEFSVVVTNWGATILTVNLPDKNGHIDDVVLGYKDIGSYVNDTTYFGALVGRVA NRIAGGRFTVKGHAFHTYKNDGKNTLHGGHRGFNQVFWSVRERATGHFPYITFYYRSY DGEQGFPGALDVLVTYKIDGDYSFSVTMYARPVDDGKPTPVNLAQHTYWNLRGHGNGT ILDHSVQIFASAVTPVGAGLIPTGAVSPVSGTPFDFRAPAPPGARIADVPGGGYDINY VLDGEADGQGVRKAAVVSEPTSGRVLELWSDQPGLQFYTGNFLKGDEGKGGARYVKHG GLCLETQDYPDAVHNAKFPTEIYRKGQEYKHYMLYKFSLAKK</aaseq>

Gene Sequence

<dnaseqindica>814..1680#571..620#51..264#gcacggattagaggaagattagtagtattagtagtcgggattaggcagtaatggcggcgacgagcgccaggagcgtggcgtggcaatggttggccgtggcggcggcggtggcggcggcgtctctgatcggcggcacgccggcggaggcgaggaggggagggaaggagtccatcggtttctacgagctgcgtcggggcgagttctccgtcgtcgtcaccaactggggcgccaccatcctcaccgtcaacctccccgacaagaacggtaattgatccagtcttgttaatttctcagtatcatgttaagggtttaatttttcgttttcggtgtttatatcaggaagtgttgataaagataaattttcgaaattttaaacaaaatttagtcaaatatgaagaaatattatcaaattcacgaaaacttaaaaaaattaaaaatttcggccgaaataatatcgtatcggagggatatgaaataaacgaaatttcggaaaccaacagttcaaaatgtcgaaccctcatcatgttcactcgagttcttgagattaatcatgcagaatatgttttgcagggcacattgatgacgtcgttcttggctacaaagatattggatcttacgtggtgagctagctagatcccatggcaaattaagaaaactatattaatctacatgaaatggcaaattaagaaaactatattaatctacatgaaatggcaaattaagaaaactatattaatctacatgaaatggcatatcgatcgatgatctaattttgtttttcgtacgttttatgcgtatgtttttggtttgaagaatgacacgacctacttcggggcgctggtggggcgggtggcgaaccggatcgccggcgggaggttcacggtgaaggggcatgcgttccacacgtacaagaacgacggcaagaacacgctccacggcggccaccgcgggttcaaccaggtgttctggtcggtccgggagagggccaccggccacttcccctacatcaccttctactaccggagctacgacggcgagcagggcttcccgggcgccctcgacgtgctcgtcacctacaagatcgacggcgactactccttcagcgtcaccatgtacgcccgccccgtcgacgacggcaagcccacgccggtcaacctcgcccagcacacctactggaacctccgcggccacggcaacggcaccatcctcgaccactccgtccagatcttcgcgtcggcggtcacccccgtcggcgccggcctcatccccacgggagccgtctcgcccgtctccggcacgccgttcgacttccgcgcccccgcgccgcccggcgcgcgcatcgccgacgtccccggcggcgggtacgacatcaactacgtgctcgacggcgaggccgacgggcagggcgtgcgcaaggcggcggtggtgagcgagcccacctcggggcgcgtgctggagctgtggtccgaccagcccgggctgcagttctacacgggcaacttcctcaagggcgacgagggcaagggcggcgcgcgctacgtgaagcacggcggactctgcctcgagacgcaggactacccggacgccgtccacaacgccaagttccccaccgagatctaccgcaagggccaggagtacaagcactacatgctctacaagttctctctcgccaagaagtagattattaagacgttcgtcgtaatcaaatcaagaattcaagataattattagcctacatggtttttgtgagcgattatgtatcttagattatgctagtagtacacttaggtgatcggtatgaagcttacgtgattttagatgatgattaacgtgccaaataattcgcaaaagagagcagcacatgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0381000, RefSeq:Os03g0381000