Os03g0382100

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Revision as of 12:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0382100| Description = Very-long-chain 3-ketoacyl-CoA synthase family protein| Version = NM_001056778.2 GI:297601004 GeneID:4332981| Length...")
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Gene Name

Os03g0382100

Description

Very-long-chain 3-ketoacyl-CoA synthase family protein

Version

NM_001056778.2 GI:297601004 GeneID:4332981

Length

2001 bp

Definition

Oryza sativa Japonica Group Os03g0382100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15700904..15702904

Sequence Coding Region

15700963..15702366

Expression

GEO Profiles:Os03g0382100

Genome Context

<gbrowseImage1> name=NC_008396:15700904..15702904 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15700904..15702904 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctgcttgccttggtcaccgtgctcctcctggcgcacgccgtggcgtacctcgcgtggacggcggcggcgcggcggcggcagtcgcggtgctacctcctcgactacgtgtgccacaagccgtccgacgaccgcaaggtgagcacggaggcggccggcgcggtgatcgagcggagcaagcggctcagcctgccggagtacaggttcctcctccgcgtcatcgtccgctccggcatcggcgaggagacgtacgcgccgcggaacgtgctcgacggccgggagggcgagcccacgcacggggactcgctcggcgagatggaggacttcttcggcgactccatcgccgagctcttcgccaggacggggttcggcccgcgcgacgtcgacgtgctcgtcgtcaacgcctccatgttctcgccggacccgtcgctggcgtccatgatcgtgcaccgctacggcatgcgcgaggacgtcgccgcctacagcctcgccgggatggggtgcagcgcggggctgatctcgctggacctggcgcggaacacgctggcgacgcggccgcgcgcgctggcgctcgtcgtgtccacggagtccatcgcgcccaactggtacaccggcaccgacaagtccatgatgctggctaactgcctgttccgctgcggcggcgcctccgtgctggtcaccaacgacccggtgctccgcgggcgcgccaagatggagctcggctgcctcgtgcgcgccaacatcgccgccaacgacgacgcccacgcctgcgcgctgcagcgggaggacgacgacggcaccgtcgggatcagcctcagcaaggcgctccccaaggccgccgtccgcgccttcgccgccaacctccgccgcctcgccccgcgcatcctccccatcaccgagctcgcccgcttcgccgcccagctgctcatcaccaagaagctcctccgccgccgcgccaccgccgccaccgccaccaagcacaccggcggcgacgggcccaggatcaacttcaagacgggcgtggaccacttctgcctccaccccggcggcacggccgtgatcgaggccgtgaagcgcagcctgggcctcgacgacgacgacgtggagccggcgaggatgacgctgcaccggtgggggaacacgtcggcgagcagcctgtggtacgtgctgtcgtacatggaggcgaaggggaggctgaggcggggcgacaaggtgctgatggtgacgttcgggtcggggttcaagtgcaacagctgcgtgtgggaggtgaccggcgacatggccgacaagggcgcgtgggccgactgcatcgacgcctacccgccggagaacacggccaacccctacatggagaagtattcgtggatcaacgacgtcgacggagacagcctcatcatctaa</cdnaseq>

Protein Sequence

<aaseq>MELLALVTVLLLAHAVAYLAWTAAARRRQSRCYLLDYVCHKPSD DRKVSTEAAGAVIERSKRLSLPEYRFLLRVIVRSGIGEETYAPRNVLDGREGEPTHGD SLGEMEDFFGDSIAELFARTGFGPRDVDVLVVNASMFSPDPSLASMIVHRYGMREDVA AYSLAGMGCSAGLISLDLARNTLATRPRALALVVSTESIAPNWYTGTDKSMMLANCLF RCGGASVLVTNDPVLRGRAKMELGCLVRANIAANDDAHACALQREDDDGTVGISLSKA LPKAAVRAFAANLRRLAPRILPITELARFAAQLLITKKLLRRRATAATATKHTGGDGP RINFKTGVDHFCLHPGGTAVIEAVKRSLGLDDDDVEPARMTLHRWGNTSASSLWYVLS YMEAKGRLRRGDKVLMVTFGSGFKCNSCVWEVTGDMADKGAWADCIDAYPPENTANPY MEKYSWINDVDGDSLII</aaseq>

Gene Sequence

<dnaseqindica>60..1463#aaaacaccaccactgatcatcactagctttctacttgtagaaggagagagagatcagcaatggagctgcttgccttggtcaccgtgctcctcctggcgcacgccgtggcgtacctcgcgtggacggcggcggcgcggcggcggcagtcgcggtgctacctcctcgactacgtgtgccacaagccgtccgacgaccgcaaggtgagcacggaggcggccggcgcggtgatcgagcggagcaagcggctcagcctgccggagtacaggttcctcctccgcgtcatcgtccgctccggcatcggcgaggagacgtacgcgccgcggaacgtgctcgacggccgggagggcgagcccacgcacggggactcgctcggcgagatggaggacttcttcggcgactccatcgccgagctcttcgccaggacggggttcggcccgcgcgacgtcgacgtgctcgtcgtcaacgcctccatgttctcgccggacccgtcgctggcgtccatgatcgtgcaccgctacggcatgcgcgaggacgtcgccgcctacagcctcgccgggatggggtgcagcgcggggctgatctcgctggacctggcgcggaacacgctggcgacgcggccgcgcgcgctggcgctcgtcgtgtccacggagtccatcgcgcccaactggtacaccggcaccgacaagtccatgatgctggctaactgcctgttccgctgcggcggcgcctccgtgctggtcaccaacgacccggtgctccgcgggcgcgccaagatggagctcggctgcctcgtgcgcgccaacatcgccgccaacgacgacgcccacgcctgcgcgctgcagcgggaggacgacgacggcaccgtcgggatcagcctcagcaaggcgctccccaaggccgccgtccgcgccttcgccgccaacctccgccgcctcgccccgcgcatcctccccatcaccgagctcgcccgcttcgccgcccagctgctcatcaccaagaagctcctccgccgccgcgccaccgccgccaccgccaccaagcacaccggcggcgacgggcccaggatcaacttcaagacgggcgtggaccacttctgcctccaccccggcggcacggccgtgatcgaggccgtgaagcgcagcctgggcctcgacgacgacgacgtggagccggcgaggatgacgctgcaccggtgggggaacacgtcggcgagcagcctgtggtacgtgctgtcgtacatggaggcgaaggggaggctgaggcggggcgacaaggtgctgatggtgacgttcgggtcggggttcaagtgcaacagctgcgtgtgggaggtgaccggcgacatggccgacaagggcgcgtgggccgactgcatcgacgcctacccgccggagaacacggccaacccctacatggagaagtattcgtggatcaacgacgtcgacggagacagcctcatcatctaagtaaattaaaacggattaattcatttcccacccatctccacaaattaaaagtttacacctctctattcccttctttaatatataacgttaattatttcaaaaatgaattaaccaacgtcgtacataaaagaacagagagggagtacatatgtgtacatgcatggagatatacacacacacacacatatcacagattcacaatattatatatgttgaaatttggtaataaggatattgatctgtgctagccaactagttcatctctgaattggaactgaaatagaaaggatcgagtacgtaggtgcagaccaaatcagtcttactagcgtgtgtgtgtcattaagtgtcatgcatgcataattgcatctatgtaataaagtcaaattagtagccatatttacgggtttcaacgattgttaattaggaaaaacatgtgtgtgttttgttgattagctcttaattagacttctcggatgccggccatgtgttgtttcagtggtccatatatatgcaaagaataatgaagttctttccgact</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0382100, RefSeq:Os03g0382100