Os03g0383100

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Revision as of 12:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0383100| Description = Conserved hypothetical protein| Version = NM_001056780.1 GI:115453288 GeneID:4332983| Length = 6744 bp| Definition ...")
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Gene Name

Os03g0383100

Description

Conserved hypothetical protein

Version

NM_001056780.1 GI:115453288 GeneID:4332983

Length

6744 bp

Definition

Oryza sativa Japonica Group Os03g0383100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15740069..15746812

Sequence Coding Region

15740762..15740780,15745307..15746724

Expression

GEO Profiles:Os03g0383100

Genome Context

<gbrowseImage1> name=NC_008396:15740069..15746812 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15740069..15746812 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cttctttcgctatattttgaacggcgaggaggattcatcggctgcttcgtcgttgatccaagcgaacttctccaagaacgggctgggcttgctctccggtgggtacgcgtcgatgcagtcggcccacgcgcccttgtcggccatgtcgccggccacctcccacacgcagctgttgcacttgaaccccgacccgaacgtcaccatcagcaccttgtcgcctcgcctcaacctccccttcgcctccatgtacgacagcacgtaccacacgctgctcgccgacgtgttcccccacctgtgcaacgtcatcctcaacggctcgacgtctcgctcctccagcccgaaactcttcttcaccgcgtcgatcaccgccaccccgccggcgtggaggcagatgtggtccacccctgccttgaggttgatcttcagcttggtctgccctcggtggcggcggcgctgcaacagattctgccatgccaggtcggcggcgagccgggcgatttccatggccgggaggacgcgcggcaggaggcgctgcaggttggcggcgaacgcgcggagcgcggccttggggagggccttgctgatgctgaccccgcggaggccatcgtcgtcctcgcgctgcatgatgcaggagtaggcgtcgtcgctggccgcggtggtggagcgcacaaggcggcggagctccatcttggcgcggccgcggtgggccgggtcgttgctgagcagcacggctgccccgccgcaccggaacaggcactgtgccagcatcatggtcctctccttcccggcgtaccagtgcggcgccagcgactccgtcgataccaccagcgccaccacgggccgcggcgaccgagcgcgcatggcgttccggccgacgtccaccgcgaccagcgtggcgctgcaccccatcccggagaggttgtacgccgcgacgtcctcgcgcatgccgtaccggcgcaccaccctggacgcgaggcagggctccgggaagaagccattgacgttgacgacgagcacgtcgacgtcgcgggcccggagccccgtcctggcgaggagctccgggacggcgccgtcgaagcaggcgtccatctcgtcgaccgaatccctctgggcggcgagctcctcgcggccgtcgaggaggttccgcggcgcgtaggtccggtcgccgagtcccgtgcgggagatgaggcggacgaggaagcgaaactccggtatcccaagccgctcgttgcgctggacaatcgcgcatgccagctccgtcgtcagcgtgaggtcatccgccggcttgtagcagacgtagtccaggaggtagcaccgcatgccgcggcggcgggaggcggccgtccatgccatgtgcgccaccgcgagtggcggcgggaggaagagcacgacggcgagcaaaggcgtgagctccatagtgttcgcatgcatgcatga</cdnaseq>

Protein Sequence

<aaseq>LLSLYFERRGGFIGCFVVDPSELLQERAGLALRWVRVDAVGPRA LVGHVAGHLPHAAVALEPRPERHHQHLVASPQPPLRLHVRQHVPHAARRRVPPPVQRH PQRLDVSLLQPETLLHRVDHRHPAGVEADVVHPCLEVDLQLGLPSVAAALQQILPCQV GGEPGDFHGREDARQEALQVGGERAERGLGEGLADADPAEAIVVLALHDAGVGVVAGR GGGAHKAAELHLGAAAVGRVVAEQHGCPAAPEQALCQHHGPLLPGVPVRRQRLRRYHQ RHHGPRRPSAHGVPADVHRDQRGAAPHPGEVVRRDVLAHAVPAHHPGREAGLREEAID VDDEHVDVAGPEPRPGEELRDGAVEAGVHLVDRIPLGGELLAAVEEVPRRVGPVAESR AGDEADEEAKLRYPKPLVALDNRACQLRRQREVIRRLVADVVQEVAPHAAAAGGGRPC HVRHREWRREEEHDGEQRRELHSVRMHA</aaseq>

Gene Sequence

<dnaseqindica>694..712#5239..6656#agatgccgcacgacggcaagtggttcttgttcgcatctttttcccctttccttctctcctctcggtgaactggtgtggacacctccggccatgagtttcgccaccggagtggttcatcttctggctgtgcccaagaccgtctctctcgctagctgccacgccatttaattccacccatgtttctttcccttcaagatcttgagcgcaacaggcaagacctcaaaaattttcttgtgtcttgtttcctcagctctatttttttttctataaattaattaatctgatctttgcaagcgaatttagtgaaattagaatagaagatttgaaattattttgttgttattaattttctaggttgtagggttaggatttgtcagtttgaagcaaaactgtacagcactattaacatatttggggctatgactttattatatcgctattctccttttgcatcatggctataaatgacaggcggatgtattggagaaatttctcaaaagcaaatcaccacaaaataccaataatatgttcacaagtaccaccctaatcaacgagaaaggaaaatgcatctaacattaaattattttttgacggttattcagttgcaaattttgatgattttactcacttttatgctgtaggtgatttaagtatactcaggttggctgatgatttgagtgtatatgatattaacttctttcgctatattttggtaagcattttgttattgcttcttatttggtgctgtaattatgaacagttaaattgttcgtgttatatgcagggttttcgatttcgatttcggctaaaatttcactcattttggttttaccgaaatttcaggatttttggcatattttaacataatttaactgaatttgactaaattttaatcaacttcataaaattttgagaaaaacaaaaattttggccgagataatcacttgctgaggtgtccaaaattaccgaaattgcaatccctcgttatatggtcatttgcttaagtattatttttatcccgctttatgcacaacaaagtggtgcacccccctcaattcctctccagctccaccactgggtattaattgctaagataatgtcggaggatggtacttcaattatcatgatgttcttatgcttatttcaactatagcagaatgatgatttgcatgtaaagaacaaaatgatcaaaacaaactgattttctcacatgtttacctattttggtcggtagagactcatgctcatgacgttgagaaatcggtctattctactcatcagcacacaagcaggcaaacacaaaaaatatgggcgagagtggaagctttatttcttctgatttgagaacaagctacaagaaggaagataggaggtgtcggagagtgtttgtcaccgtattggacctcggggtcctatttatatataggtggagctgataagagattgtcacgcccagaaattcactagtaatttccgaacttatttgtgcatgaaatcctcgtccagtaatcagccgaggtacacaaactgacaatttaatatacagattcatcaataatacaacgttacatacttacaaatgaaaagaaaacagcagcggaataacggtctagcgaagctctggctccactcccacaggtagctcaactggggtataagtcaaacgtcttctccttcgcaacttaacttcaactgaggtttgattgattattacaaggtgagcatatgacatactcagcaagccacacagcaaatatgcaagtgcacaaggataccaaaggatagcataatatagggctcatttgcaaaagcaacatttagcaaacagttaataattgtaaaacagtagagtaattaatcatcaatattaatcaacgctgaacaacacacccatgctgcacaggcccaaccatcctgaacaactatacccggctgtacagatctatctccaaaccaggaatgtaccattccaaactaggagctaaattaattgccatcaattatcacattattattaatgagtggtgtgggactaatcacgaaagacattgttagacccgcccataaccgcgggcacggctattcgaatagttttactctggccagagatgtaccactgtacccacaagacacaacccactgtcatgtcactgtgtccgcgcagacacgtcaccatggcgagtgattgtgacaagacccctcgcataactcaactcaaagtaatacaccgttcctggatcataatcacccccatataaaacaaggcatagactccccaacgacccccgtgggcttatctccgccacttctcagtctggcacaccacaatgagtcttgctatacaaagtgtccagccgttgcccactctggcttgtggttggcacggttaatgtttcacaaccgaaactcgtgaaccggtccttaattgttatgagcacgaccatcaaaaccatgtgctcacaacccaccattatcaagttttagttggcacattaattaattaaccaatcacgattgaccatcgtgagctacctttaccatgtacatcattaagtaatggtgaaacattagttatcccaatagtgtgctaatgtttctaagcatggctaagcaattagatctaatacatctagttgaaccaatatataaatccaactagtcaaattataacccgaggtaatcaagaaatagggtaatcaatgcaaattggccataacaaaggaataggttcacaccacccggtgacattcgaaaataaatgtacagttgaaataaatagagaatttaaatataggatcaacatgctcaaaggaattgtgtttgggatctgtgtgacttgccttgcaacattcggtcttcaattaatcttcttgaacacttccggcgcacttgcgaaccttcgaaacgacggaaacgacaagctaacacgcaaaacgaggaaaaatactaagaaactccaaataaacaatacatataaagtaaacaaacatgtagatcatgattttagatgaattatgagacttgaacggcctcattctgacttcatatgaattaattaccaattttacaagattaaacctaattaaaggattaaataaatttaacacaatttatggataattttactatatagatctttattttctacaacttttgcaacttgaaccacattaaaccgagttgcaatgaattagttatgaatttttaaacattaaaccgaattaaagcatttatatagattttaattgaattatgacgcaataaagtattatttttaaaaggaaaagagatttttgcgtcatcaaggacagtccacggtaaaccgggttcacagaagcggtccacggatccaacgcccaagatctaattgacctaaaattgaccgaatcggacgaccgagatcgatccggactaccacgggtctacggctgacaaagcgctgacatcagtgatgatgtcatcgccggcggctcggcaccatgctcgacggtgaacggcggcgaggcggcgcaaacggagggcaccaacgggtagagggcgacgcggcgaactcaccgagcacttggacgacggcaaacgacgacggatgacgacagcggcgaggtcgaggcggcggcggtcttcgggtcggcgatgacggtggtgctccggcgggaaacagcggcaacggagggctggccgaggttcttctcctcctcgcgaacccgatggtggcaacggcaaccgaaggcggcggctgcaacggcggtgcggcgtggctggaccgacgtcgacggtggagagcttcgggtcgatggtgtcggcggcgctccggtgatctgcggcggaaacggaggacgggacgaggacggcggcgacctcgcgatactgatgaaggagacggcgactgacggcgacgaccgaagcgatggcggcgcccgactggacacccgccggcggcagcgacgcaaagaaccacgcgaaggcgacgctagagaaggtggcaggctagggcgaaggtggcggcgaaaagaggaggtcccgggggtccttttataggggctagggggcagcggctaggcccacggcggtggcaaggagatggaaagctagggttgaagggagaaaaatcgatccgaatcgagctcaaatccgtcagtttccaaacgaaattagccaaagtttccaaaaaagaaaaggaagaggagatcccgaggatcatttcccctctatcaatttgatcggagaaggataggggcggccggattttggaaggagatcggcggcgcgcggcaaggctggggtggcggactgggccggcttgggtcgggcgtgagcaggccgaggggaagggagagacttgggccgactttcggcccaaatccaaaagaaggatttaaaaacatttttctatttaaattattcatgaaatgatattccgtttattaaaaatgcttcctttgctcaaataaatcctagaaaaatctagaaactatagaaacaaaagaagtatttaacaaaattttatctatctcacttttatattgagatttattaaattaaaattagatcttctcttttaggcttttaagattatttctaataatttcttttaaacaacaatttataatttaaggatttttaaacaagaaaagcacttaacataattataattagatcattaattgattaactaattactgagctgttctttgtatcatttaggaattgagctctgaaaaatccgagaaaatttcagagagtataattaatcatggagaatttaataaaaattaaatccatccatgctctaaatttaggaaattttatttcccacatttaacttcacttgtaaattaatgaacatttaatataaattctattaataatttattaaataatttataaatcctgaaacggaaaatcaggctgtgacagaggtttccactgtaaaattgcttcccctgcaagctggctttttgggcaaagcttgcttctccaagttaggctgtgtttagttccgaagtttagggataagtttggagaaagttggtagtttggaaaaaaagttgggagtttatgtgagtagaaaagtttttgatgtgatgaaaagtttagagtttgggggaagtttggtgtgatctaaacacacccttattatcttggaatatattgtttgtgagcttttatagcgaaactatactcgaggcgggttgcgctttactcctactgccaattaatgcgtctcacgtcctctagaacggcgaggaggattcatcggctgcttcgtcgttgatccaagcgaacttctccaagaacgggctgggcttgctctccggtgggtacgcgtcgatgcagtcggcccacgcgcccttgtcggccatgtcgccggccacctcccacacgcagctgttgcacttgaaccccgacccgaacgtcaccatcagcaccttgtcgcctcgcctcaacctccccttcgcctccatgtacgacagcacgtaccacacgctgctcgccgacgtgttcccccacctgtgcaacgtcatcctcaacggctcgacgtctcgctcctccagcccgaaactcttcttcaccgcgtcgatcaccgccaccccgccggcgtggaggcagatgtggtccacccctgccttgaggttgatcttcagcttggtctgccctcggtggcggcggcgctgcaacagattctgccatgccaggtcggcggcgagccgggcgatttccatggccgggaggacgcgcggcaggaggcgctgcaggttggcggcgaacgcgcggagcgcggccttggggagggccttgctgatgctgaccccgcggaggccatcgtcgtcctcgcgctgcatgatgcaggagtaggcgtcgtcgctggccgcggtggtggagcgcacaaggcggcggagctccatcttggcgcggccgcggtgggccgggtcgttgctgagcagcacggctgccccgccgcaccggaacaggcactgtgccagcatcatggtcctctccttcccggcgtaccagtgcggcgccagcgactccgtcgataccaccagcgccaccacgggccgcggcgaccgagcgcgcatggcgttccggccgacgtccaccgcgaccagcgtggcgctgcaccccatcccggagaggttgtacgccgcgacgtcctcgcgcatgccgtaccggcgcaccaccctggacgcgaggcagggctccgggaagaagccattgacgttgacgacgagcacgtcgacgtcgcgggcccggagccccgtcctggcgaggagctccgggacggcgccgtcgaagcaggcgtccatctcgtcgaccgaatccctctgggcggcgagctcctcgcggccgtcgaggaggttccgcggcgcgtaggtccggtcgccgagtcccgtgcgggagatgaggcggacgaggaagcgaaactccggtatcccaagccgctcgttgcgctggacaatcgcgcatgccagctccgtcgtcagcgtgaggtcatccgccggcttgtagcagacgtagtccaggaggtagcaccgcatgccgcggcggcgggaggcggccgtccatgccatgtgcgccaccgcgagtggcggcgggaggaagagcacgacggcgagcaaaggcgtgagctccatagtgttcgcatgcatgcatgagctagagagaccacaggctggtaatatataccagcgaccgtcgcagcaacgaaattaattacagtttctaacttaattttcttgtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0383100, RefSeq:Os03g0383100