Os03g0383200

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Revision as of 12:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0383200| Description = Very-long-chain 3-ketoacyl-CoA synthase family protein| Version = NM_001186519.1 GI:297722168 GeneID:9269580| Length...")
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Gene Name

Os03g0383200

Description

Very-long-chain 3-ketoacyl-CoA synthase family protein

Version

NM_001186519.1 GI:297722168 GeneID:9269580

Length

1401 bp

Definition

Oryza sativa Japonica Group Os03g0383200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:15745303..15746703

Sequence Coding Region

15745303..15746703

Expression

GEO Profiles:Os03g0383200

Genome Context

<gbrowseImage1> name=NC_008396:15745303..15746703 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:15745303..15746703 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctcacgcctttgctcgccgtcgtgctcttcctcccgccgccactcgcggtggcgcacatggcatggacggccgcctcccgccgccgcggcatgcggtgctacctcctggactacgtctgctacaagccggcggatgacctcacgctgacgacggagctggcatgcgcgattgtccagcgcaacgagcggcttgggataccggagtttcgcttcctcgtccgcctcatctcccgcacgggactcggcgaccggacctacgcgccgcggaacctcctcgacggccgcgaggagctcgccgcccagagggattcggtcgacgagatggacgcctgcttcgacggcgccgtcccggagctcctcgccaggacggggctccgggcccgcgacgtcgacgtgctcgtcgtcaacgtcaatggcttcttcccggagccctgcctcgcgtccagggtggtgcgccggtacggcatgcgcgaggacgtcgcggcgtacaacctctccgggatggggtgcagcgccacgctggtcgcggtggacgtcggccggaacgccatgcgcgctcggtcgccgcggcccgtggtggcgctggtggtatcgacggagtcgctggcgccgcactggtacgccgggaaggagaggaccatgatgctggcacagtgcctgttccggtgcggcggggcagccgtgctgctcagcaacgacccggcccaccgcggccgcgccaagatggagctccgccgccttgtgcgctccaccaccgcggccagcgacgacgcctactcctgcatcatgcagcgcgaggacgacgatggcctccgcggggtcagcatcagcaaggccctccccaaggccgcgctccgcgcgttcgccgccaacctgcagcgcctcctgccgcgcgtcctcccggccatggaaatcgcccggctcgccgccgacctggcatggcagaatctgttgcagcgccgccgccaccgagggcagaccaagctgaagatcaacctcaaggcaggggtggaccacatctgcctccacgccggcggggtggcggtgatcgacgcggtgaagaagagtttcgggctggaggagcgagacgtcgagccgttgaggatgacgttgcacaggtgggggaacacgtcggcgagcagcgtgtggtacgtgctgtcgtacatggaggcgaaggggaggttgaggcgaggcgacaaggtgctgatggtgacgttcgggtcggggttcaagtgcaacagctgcgtgtgggaggtggccggcgacatggccgacaagggcgcgtgggccgactgcatcgacgcgtacccaccggagagcaagcccagcccgttcttggagaagttcgcttggatcaacgacgaagcagccgatgaatcctcctcgccgttctag</cdnaseq>

Protein Sequence

<aaseq>MELTPLLAVVLFLPPPLAVAHMAWTAASRRRGMRCYLLDYVCYK PADDLTLTTELACAIVQRNERLGIPEFRFLVRLISRTGLGDRTYAPRNLLDGREELAA QRDSVDEMDACFDGAVPELLARTGLRARDVDVLVVNVNGFFPEPCLASRVVRRYGMRE DVAAYNLSGMGCSATLVAVDVGRNAMRARSPRPVVALVVSTESLAPHWYAGKERTMML AQCLFRCGGAAVLLSNDPAHRGRAKMELRRLVRSTTAASDDAYSCIMQREDDDGLRGV SISKALPKAALRAFAANLQRLLPRVLPAMEIARLAADLAWQNLLQRRRHRGQTKLKIN LKAGVDHICLHAGGVAVIDAVKKSFGLEERDVEPLRMTLHRWGNTSASSVWYVLSYME AKGRLRRGDKVLMVTFGSGFKCNSCVWEVAGDMADKGAWADCIDAYPPESKPSPFLEK FAWINDEAADESSSPF</aaseq>

Gene Sequence

<dnaseqindica>1..1401#atggagctcacgcctttgctcgccgtcgtgctcttcctcccgccgccactcgcggtggcgcacatggcatggacggccgcctcccgccgccgcggcatgcggtgctacctcctggactacgtctgctacaagccggcggatgacctcacgctgacgacggagctggcatgcgcgattgtccagcgcaacgagcggcttgggataccggagtttcgcttcctcgtccgcctcatctcccgcacgggactcggcgaccggacctacgcgccgcggaacctcctcgacggccgcgaggagctcgccgcccagagggattcggtcgacgagatggacgcctgcttcgacggcgccgtcccggagctcctcgccaggacggggctccgggcccgcgacgtcgacgtgctcgtcgtcaacgtcaatggcttcttcccggagccctgcctcgcgtccagggtggtgcgccggtacggcatgcgcgaggacgtcgcggcgtacaacctctccgggatggggtgcagcgccacgctggtcgcggtggacgtcggccggaacgccatgcgcgctcggtcgccgcggcccgtggtggcgctggtggtatcgacggagtcgctggcgccgcactggtacgccgggaaggagaggaccatgatgctggcacagtgcctgttccggtgcggcggggcagccgtgctgctcagcaacgacccggcccaccgcggccgcgccaagatggagctccgccgccttgtgcgctccaccaccgcggccagcgacgacgcctactcctgcatcatgcagcgcgaggacgacgatggcctccgcggggtcagcatcagcaaggccctccccaaggccgcgctccgcgcgttcgccgccaacctgcagcgcctcctgccgcgcgtcctcccggccatggaaatcgcccggctcgccgccgacctggcatggcagaatctgttgcagcgccgccgccaccgagggcagaccaagctgaagatcaacctcaaggcaggggtggaccacatctgcctccacgccggcggggtggcggtgatcgacgcggtgaagaagagtttcgggctggaggagcgagacgtcgagccgttgaggatgacgttgcacaggtgggggaacacgtcggcgagcagcgtgtggtacgtgctgtcgtacatggaggcgaaggggaggttgaggcgaggcgacaaggtgctgatggtgacgttcgggtcggggttcaagtgcaacagctgcgtgtgggaggtggccggcgacatggccgacaagggcgcgtgggccgactgcatcgacgcgtacccaccggagagcaagcccagcccgttcttggagaagttcgcttggatcaacgacgaagcagccgatgaatcctcctcgccgttctag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0383200, RefSeq:Os03g0383200