Os03g0388500

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Revision as of 12:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0388500| Description = Similar to Anther ethylene-upregulated protein ER1 (Fragment)| Version = NM_001056800.1 GI:115453328 GeneID:4333007| ...")
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Gene Name

Os03g0388500

Description

Similar to Anther ethylene-upregulated protein ER1 (Fragment)

Version

NM_001056800.1 GI:115453328 GeneID:4333007

Length

2203 bp

Definition

Oryza sativa Japonica Group Os03g0388500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16056480..16058682

Sequence Coding Region

16056482..16057045,16057594..16057923

Expression

GEO Profiles:Os03g0388500

Genome Context

<gbrowseImage1> name=NC_008396:16056480..16058682 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16056480..16058682 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtccttatagcaaatggagctgcagcaggtgcattgacagatcctacttctgaatttccttctggaagaactccagccgatttagcctctacgaatggacacaagggaattgccggttttctcgcggaatctgctttgacaagccatctgtcagcacttactttaaaggaatcaaaagatagcaatgcggaagaagcatgcagattaacaattcctgaagatctccctgaaatgaattatggtcagcttgctgtacaggattctcatgctgaatcattaaaggattcattaagtgctgttcgtaaatccgctcaagctgcagctaggatattccaagccttcagggtggaatcattccacagaaagaaggtcgtggaatatggagatgatgattgtggattatctgatgaacacacattttcacttatttctcttcaaaaggtcaaacaagggcaacatgatacacgtttgcattctgctgctgtacgtatccaaaataagttccgaggatggaagggaagaaaggagtttatgatcattcgccagagaattgtgaagttacaggctcatgtgcgaggacatcaagtgaggaaaaactataaaaaagtagtctggtcagtaggtattgtcgagaaagttatattgagatggaggagaaagggacgtggtttgcgtggctttcgacctgagaaacaattagaaggccagacacaaatccagcctgcaaaaacagaggatgaatacgattacttgcaggatggcagaagacaggctgaaggcagactacagagggcactggaccgggtgcgctctatgacacaatacccagaagcaagagaacagtaccgtaggcttacaacttgtgttgctgaaatgcaacagtccagggtatga</cdnaseq>

Protein Sequence

<aaseq>VLIANGAAAGALTDPTSEFPSGRTPADLASTNGHKGIAGFLAES ALTSHLSALTLKESKDSNAEEACRLTIPEDLPEMNYGQLAVQDSHAESLKDSLSAVRK SAQAAARIFQAFRVESFHRKKVVEYGDDDCGLSDEHTFSLISLQKVKQGQHDTRLHSA AVRIQNKFRGWKGRKEFMIIRQRIVKLQAHVRGHQVRKNYKKVVWSVGIVEKVILRWR RKGRGLRGFRPEKQLEGQTQIQPAKTEDEYDYLQDGRRQAEGRLQRALDRVRSMTQYP EAREQYRRLTTCVAEMQQSRV</aaseq>

Gene Sequence

<dnaseqindica>3..566#1115..1444#gcgtccttatagcaaatggagctgcagcaggtgcattgacagatcctacttctgaatttccttctggaagaactccagccgatttagcctctacgaatggacacaagggaattgccggttttctcgcggaatctgctttgacaagccatctgtcagcacttactttaaaggaatcaaaagatagcaatgcggaagaagcatgcagattaacaattcctgaagatctccctgaaatgaattatggtcagcttgctgtacaggattctcatgctgaatcattaaaggattcattaagtgctgttcgtaaatccgctcaagctgcagctaggatattccaagccttcagggtggaatcattccacagaaagaaggtcgtggaatatggagatgatgattgtggattatctgatgaacacacattttcacttatttctcttcaaaaggtcaaacaagggcaacatgatacacgtttgcattctgctgctgtacgtatccaaaataagttccgaggatggaagggaagaaaggagtttatgatcattcgccagagaattgtgaagttacaggtacccttgtaacctttttcttctaatctttcttaagactacatctactgaattcccatgataatataggatttcaaatagctccttctagttgatatacaattttcctataatctggtagttaataacaacaggagaccttgtgacgtagttccttacaagtctctgcttttcagtttgagaatagatcattcacattgaatttatcaactttatatttatttgaaaaggtcctgcacactgcacaaataaattaatttttctttaattgtatttggccaattggcccagctgcagccttgaagctaaatgtcagttctcgtattctatttagttcattcagtcaaggtggcatatatcctgatttaaagtcagtaattttgatatgccaccttatagttatacaagtagtcagtacttattgtactgacaagttgttaacatctttagtttcttttgttgattcaatgtaatgccatattagatgacttgtcaatagtcctgttcaatgatgatattaatcttgtaaatatttttttaatcattaggctcatgtgcgaggacatcaagtgaggaaaaactataaaaaagtagtctggtcagtaggtattgtcgagaaagttatattgagatggaggagaaagggacgtggtttgcgtggctttcgacctgagaaacaattagaaggccagacacaaatccagcctgcaaaaacagaggatgaatacgattacttgcaggatggcagaagacaggctgaaggcagactacagagggcactggaccgggtgcgctctatgacacaatacccagaagcaagagaacagtaccgtaggcttacaacttgtgttgctgaaatgcaacagtccagggtatgactaatactactcatctcttaccagatagtcacactattctgggtcatgcattagtgaaggaaaaatgtctaatttaccactgctctatcttgcttttatcattcgttccttttttttttccaataatgacaaactgatatcttcctcagctagacaaccgaaatctgaaaatgcttcatttgctaaagaccattagtaaatcatttgatttccgagcctagttgtttataatcaatcatcttatattcttctctgttaaggcccaatcttctagtgtactctgataaccaggtactacactaacaagcactaattcacagcacggtttttgaaaaataaaatcaaaccgaagaaagacttccattactttcgttagcctttccttttttttttcttttctctttttcaaaaacagcctatatatctgtttgaatcttgcttagcctttggtgattttgggcagatgatgcaggacgagatgctaagtgaggcagctggtgctgacggaagtgatttcatgaatggactggaggacttgatatgcagagacgacccccaaatgtctgccatttggtgaagtcgaagttgttacatcagttaggctgatcattgccttgttcattgccatattagccttgtaaattcttccgcttgtatttcactcactgcttaatatctagctcatgctgttagtattatgtaactctgtgcactgatcataatagaatatttctctcctgtatgttacaggtaggttat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0388500, RefSeq:Os03g0388500