Os03g0389000

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Revision as of 12:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0389000| Description = Peptidase C14, caspase catalytic domain containing protein| Version = NM_001056803.1 GI:115453334 GeneID:4333010| Le...")
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Gene Name

Os03g0389000

Description

Peptidase C14, caspase catalytic domain containing protein

Version

NM_001056803.1 GI:115453334 GeneID:4333010

Length

1459 bp

Definition

Oryza sativa Japonica Group Os03g0389000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16114425..16115883

Sequence Coding Region

16114425..16114484,16114583..16114804,16114883..16115340,16115421..16115883

Expression

GEO Profiles:Os03g0389000

Genome Context

<gbrowseImage1> name=NC_008396:16114425..16115883 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16114425..16115883 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctgcaactgcctcgtcggcaagggcggcaacacgaggccagccgccacgacgagcgcgcggccgtcgtcgtcgcggtgcgcgcactgcggcgcgggcctcgccgtgccgcggccggggccggggggcgctgccgccgtcaccaccgtccggtgcgcgctctgccaccgcatgacgtgcgtcgaccggcgcggcggccgcgacctgggcggcggcggcggtggcggcgcgctcgaggcctcgtcgtcgtcgtgggcgccggcggaggcgtcgttcctcaggcgagacgcgccgtccggctacccgttcgtccccgggaggaagcgcgcgctcctcgtcggcgtcagctacaagggctccagctacgagctcgaggggaccgtcaacgacgtcgactgcatgaggcgcctcctcggcgagagcttcggtttccccgccgattccatcctcgtgctcaccgaggagctgggcgagggcgacccgtcgaggtcgccgacgagggcgaacctgctggcggcgatgcggtggctggtggaagggtgcgacgccggcgactcgctggtgttccacttctccggccacggcgtgcagaagctggacgtgaacggcgacgaggtggacggctacaacgaggcgctctgccccgtggacttcgagcggagcggcaagatcctcgacgacgagatcaacgagaccatcgtccggcccctcgtcgccggcgcgaagctccacgccatcgtggacacgtgccacagcggcaccatcctggacctccccttcctctgccgcctctcccggacgggctactggcagtgggagaaccactgccgccgcccggagctcgccaagggcaccagcggcggcctcgccatctccatcagcggctgcagcgacgatcagaaatccgcagacagcagcggattctcgtcggagcaggcggcggcggcggcggcgatcggggcgatgacgtacagcttcatcagggcggtggagtcggagcccgggacgacgtacgggcggctgctggcggcgatgcgggcgacgatccgggaggggcagcaggggagcagcgtccggcggctcctccccggccgcctcggctccttcgtccgcaagatgatcccgtccggcggcgtgcaggagccgcagctttgcgcgtcggaggtgttcgacatctacaggaaaccgtttctcctgtga</cdnaseq>

Protein Sequence

<aaseq>MGCNCLVGKGGNTRPAATTSARPSSSRCAHCGAGLAVPRPGPGG AAAVTTVRCALCHRMTCVDRRGGRDLGGGGGGGALEASSSSWAPAEASFLRRDAPSGY PFVPGRKRALLVGVSYKGSSYELEGTVNDVDCMRRLLGESFGFPADSILVLTEELGEG DPSRSPTRANLLAAMRWLVEGCDAGDSLVFHFSGHGVQKLDVNGDEVDGYNEALCPVD FERSGKILDDEINETIVRPLVAGAKLHAIVDTCHSGTILDLPFLCRLSRTGYWQWENH CRRPELAKGTSGGLAISISGCSDDQKSADSSGFSSEQAAAAAAIGAMTYSFIRAVESE PGTTYGRLLAAMRATIREGQQGSSVRRLLPGRLGSFVRKMIPSGGVQEPQLCASEVFD IYRKPFLL</aaseq>

Gene Sequence

<dnaseqindica>1400..1459#1080..1301#544..1001#1..463#atgggctgcaactgcctcgtcggcaagggcggcaacacgaggccagccgccacgacgagcgcgcggccgtcgtcgtcgcggtgcgcgcactgcggcgcgggcctcgccgtgccgcggccggggccggggggcgctgccgccgtcaccaccgtccggtgcgcgctctgccaccgcatgacgtgcgtcgaccggcgcggcggccgcgacctgggcggcggcggcggtggcggcgcgctcgaggcctcgtcgtcgtcgtgggcgccggcggaggcgtcgttcctcaggcgagacgcgccgtccggctacccgttcgtccccgggaggaagcgcgcgctcctcgtcggcgtcagctacaagggctccagctacgagctcgaggggaccgtcaacgacgtcgactgcatgaggcgcctcctcggcgagagcttcggtttccccgccgattccatcctcgtgctcaccggtaatcacccaaaagaaattttctccaagaagcgatcgagctttccactgattagcgacgccgttctcttgatctctcagaggagctgggcgagggcgacccgtcgaggtcgccgacgagggcgaacctgctggcggcgatgcggtggctggtggaagggtgcgacgccggcgactcgctggtgttccacttctccggccacggcgtgcagaagctggacgtgaacggcgacgaggtggacggctacaacgaggcgctctgccccgtggacttcgagcggagcggcaagatcctcgacgacgagatcaacgagaccatcgtccggcccctcgtcgccggcgcgaagctccacgccatcgtggacacgtgccacagcggcaccatcctggacctccccttcctctgccgcctctcccggacgggctactggcagtgggagaaccactgccgccgcccggagctcgccaagggcaccagcggcggcctcgccatctccatcagcggctgcagcgacgatcagaaatccgcagacagcagcgtacgccatcgccatgcatgacgcccttgtcatccgcggaactccgtttcatcttgttggaaacattcttgatttcagggattctcgtcggagcaggcggcggcggcggcggcgatcggggcgatgacgtacagcttcatcagggcggtggagtcggagcccgggacgacgtacgggcggctgctggcggcgatgcgggcgacgatccgggaggggcagcaggggagcagcgtccggcggctcctccccggccgcctcggctccttcgtccgcaagatgatcccgtccggcggcgtgcaggtgagagattacgaactctgaatcccttgatccacatcatcaaccatggaattgcttaatttgcattattgacgccattgatcatgcgtgcgttgcaggagccgcagctttgcgcgtcggaggtgttcgacatctacaggaaaccgtttctcctgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0389000, RefSeq:Os03g0389000