Os03g0390000

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Revision as of 12:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0390000| Description = Similar to Ribosomal protein s6 RPS6-2| Version = NM_001056808.1 GI:115453344 GeneID:4333016| Length = 2312 bp| Def...")
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Gene Name

Os03g0390000

Description

Similar to Ribosomal protein s6 RPS6-2

Version

NM_001056808.1 GI:115453344 GeneID:4333016

Length

2312 bp

Definition

Oryza sativa Japonica Group Os03g0390000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16173160..16175471

Sequence Coding Region

16173401..16173627,16173861..16174133,16174229..16174337,16174424..16174481,16175240..16175304
,16175428..16175433

Expression

GEO Profiles:Os03g0390000

Genome Context

<gbrowseImage1> name=NC_008396:16173160..16175471 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16173160..16175471 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtggtgatgctcttggcgaagaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacaggggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtgataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaagagggcatctaagatcaggaagctgtttaaccttgccaaggatgatgatgtccgcaagtatgtcaacacttaccgcagaaccttcactaccaagaacggcaagaaggttagcaaggctcctaagatccagaggcttgtcactcccctgactcttcagaggaagagggcgagaatcgcccagaagaagcaaagaattgccaagaagaagtccgaggctgccgagtaccagaagctgcttgcccagaggctcaaggagcagagggaacgcaggagtgagagcttggcaaagaggaggtccaagctttctgctgccaccaccgcataa</cdnaseq>

Protein Sequence

<aaseq>MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEE FKGYVFKIMGGCDKQGFPMKQGVLTSGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGC IVSQDLSVINLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLAKDDDVRKYVN TYRRTFTTKNGKKVSKAPKIQRLVTPLTLQRKRARIAQKKQRIAKKKSEAAEYQKLLA QRLKEQRERRSESLAKRRSKLSAATTA</aaseq>

Gene Sequence

<dnaseqindica>1845..2071#1339..1611#1135..1243#991..1048#168..232#39..44#gagcgaaccctagccctagcgccgccgccgccgccgccatgaaggtacccatttctcctcctcccctccccgcgggcgacgtggtcgtctcgatccggtccggctggttgtttcttgtagcgcggtttgatctgattttgtggtcgccctgatgatgttttgcgcagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgaccagaagctgtgagtgctcctccttctctctctctcttgatgctgatctgttctgaaatgcgtggagatctcttgcatcgtgttaatctagcttgtccgctcggtccttcgttgtgtaatttgttactattgttggcaagttgggctccggctttagtcccaatatgaactggtctatgatcgcgttgtgatgtttagatctatgtgtttgtgcggctcgtagattatttttagtctcttactggaagatgaagaattggtaggtgctaaatcagatttcggaaatattcgagggaaatatgtttggaagttttttgggaaaggatagtgtggaatgggtcattgtgtttgagccttcttgctctgattcaaattctgaatcgagtgttcagtcctgtaaagtagaagcattgtataatagtcagtaaatcttgaagggaatgccatgtttcatcagtgttatgttagttttggtggatctttggcagcatagaatgcatcaattttccactagatcagaatgtaattttggtttagctgtgtttaggtagtttgaaacatctatggtcatttatagtaatactgaaaaaagtgctctctcttgcttaggttttatcttgtaatcctgtatcagttagtgtgggtgttattgttgttatgtggaagaagaactgttatagttatctgtccgtttggtgtgttatatatttgttcaagctctcctgttgtaatggtatgtaattagtgctttcctatcaattgtgcagccgggcattttatgacaagaggatctcccaggaagtcagtggtgatgctcttggcgaagtaatttctttggcaatttgctccatgattcttcaactgtcttgctatttaatgagttggatgactaagtttgtctgtttgtacaggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacaggggtagatgtttaagatgcttacatttgaatggttatgtttcattttgctttgctggcaggtgttctaatgtgaatgttccatttttatactgacaggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcagaaggaagtcagtccgtggttgcattgtcagccaagatctctctgttatcaacttggtgattgtaaagaagggtgataatgaccttcctggcttgactgacactgagaagcccaggatgaggggacccaagagggcatctaagatcaggaagctgtttaaccttgccaaggatgatgatgtccgcaagtatgtcaacacttaccgcagaaccttcactaccaagaacggtgagcattcctaacattcggtattaaccttgagttgctttgctattatgtttgttgtggactgcattgtatgcctctggtgcttgtgtaatcaacacaaaaaacacactcctaatcaagataataagctaagatataatctgtaattttttgacatagcctagcatatgcagtcaatttaatggttagtgtagagctgacctatttaccaaccatttatttttttcctgcaggcaagaaggttagcaaggctcctaagatccagaggcttgtcactcccctgactcttcagaggaagagggcgagaatcgcccagaagaagcaaagaattgccaagaagaagtccgaggctgccgagtaccagaagctgcttgcccagaggctcaaggagcagagggaacgcaggagtgagagcttggcaaagaggaggtccaagctttctgctgccaccaccgcataagacccctataagaccttaaaacattatagatgaggaagtgtttgtcgttgtgatggatagacatggtgctgctagtttttcttcggtaattggagcagttttctgtggacaagatgatgctttgtcacaatttttgagcacttgcagttgctatgtattctgatgatataacttgtgcctactattttcttggtttttgtgtcatttgatgtctcgtaatatctctctccttgactgtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0390000, RefSeq:Os03g0390000