Os03g0390200

From RiceWiki
Revision as of 12:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0390200| Description = Serine/threonine-protein kinase SAPK1 (EC 2.7.1.37) (Osmotic stress/abscisic acid-activated protein kinase 1)| Versio...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0390200

Description

Serine/threonine-protein kinase SAPK1 (EC 2.7.1.37) (Osmotic stress/abscisic acid-activated protein kinase 1)

Version

NM_001056809.1 GI:115453346 GeneID:4333017

Length

4317 bp

Definition

Oryza sativa Japonica Group Os03g0390200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16179065..16183381

Sequence Coding Region

16179493..16179780,16179904..16180002,16180106..16180210,16180314..16180406,16180514..16180606
,16180691..16180744,16180828..16180929,16181997..16182071,16183048..16183167

Expression

GEO Profiles:Os03g0390200

Genome Context

<gbrowseImage1> name=NC_008396:16179065..16183381 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16179065..16183381 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcggtacgaggtgatgagggacatcgggtccgggaacttcggggtggccaagctcgtccgcgacgtcgccaccaaccacctcttcgccgtcaagttcatcgagaggggactcaagattgatgaacatgttcaaagggagattatgaaccaccgatcactgaagcatccaaacataatccggttcaaggaggtcgtgctaactcccacacatttggcaatagttatggaatatgctgctggtggtgagctatttgaaaggatttgcaacgcagggagattcagtgaggatgaggcaaggttcttcttccaacagctgatttctggagtgagctattgtcattctatgcaagtatgccatagagatttgaaactcgaaaatactctcttggatggcagtgtcacacctcggcttaagatttgtgattttggttactccaagtcttctgtcctgcactctcaaccgaaatcaactgttggcacaccggcttacattgctccagaggtcctctctagaaaggaatacgatggaaaggtagctgatgtttggtcatgtggggtaacactctatgtgatgcttgttggtgcgtatccttttgaggaccctgatgacccaaggaacttccgcaagacgatcactaggatactcagtgtacagtattcaattccagactacgttcgagtttcagcggactgcagacatctcctgtcccggattttcgttggaaatcctgagcagaggataactatcccagagatcaagaaccacccatggttcctgaagaacctgcccatcgagatgaccgacgagtaccagaggagcatgcagctggcggacatgaacacgccgtcgcagagcctggaggaggtcatggcgatcattcaggaggcccggaaaccgggcgacgccatgaagctcgccggcgccgggcaggtcgcctgcctggggagcatggatctcgacgacatcgacgatatcgacgacattgacatcgagaacagcggggacttcgtgtgcgccttgtga</cdnaseq>

Protein Sequence

<aaseq>MERYEVMRDIGSGNFGVAKLVRDVATNHLFAVKFIERGLKIDEH VQREIMNHRSLKHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARF FFQQLISGVSYCHSMQVCHRDLKLENTLLDGSVTPRLKICDFGYSKSSVLHSQPKSTV GTPAYIAPEVLSRKEYDGKVADVWSCGVTLYVMLVGAYPFEDPDDPRNFRKTITRILS VQYSIPDYVRVSADCRHLLSRIFVGNPEQRITIPEIKNHPWFLKNLPIEMTDEYQRSM QLADMNTPSQSLEEVMAIIQEARKPGDAMKLAGAGQVACLGSMDLDDIDDIDDIDIEN SGDFVCAL</aaseq>

Gene Sequence

<dnaseqindica>3602..3889#3380..3478#3172..3276#2976..3068#2776..2868#2638..2691#2453..2554#1311..1385#215..334#tcgatcaccaccaccacctctcgctcatcccaatccccatcacgagcgccccagaatccctcccctccctcgtgcaccgcctcccgtcccatccagctccttcttcttggcgggcgagagatcgatcgagctggctgcgtgtgagcgagttgccacgagcggccaagagattaacggagggggcggaccagcggagcgaggtcgttgaggggatatggagcggtacgaggtgatgagggacatcgggtccgggaacttcggggtggccaagctcgtccgcgacgtcgccaccaaccacctcttcgccgtcaagttcatcgagaggggactcaaggtaaaatgaaagcttcaccctccaaacttttttctttctttctttctttctttttgttatggtatgcacatcgactgtgcgatctgtgctggctgtgagatgtttgctccgttcggccggggcttgtctgaattgctagagcaacgctgcttgaaatgtttccttcacatttggagtcctgcaaaaatagccgaattttcagcatccgggagaatcggttagcgttagttttgcagtaggattttacatttgttcccccatctttttagtgcagttgattggttgaagcttgcgcatttctttctagattacttttagttgtaactaatttgcttctagagaaggaatatatcccaaaatgctggtaccttttgttaggccaaaaggaacccaagaaaattggtcaatccctttgactatatttggtccctgactctctaacacctgacgaactcttatcggtgacatttgcctcaaggaagctagcagagccaaactgttctacgcatagtgattttttatttttatttttttggcgtgaagcactggctatgatgacataagtttcaatcaattttattacttatgtagcttgctgtcttttatattcaaatttgtagctgcttttgatggccttttctaagctcactttggcatttggtggatgtttctagcgttttcgctagcctttcatacatgtcactcgtcatttattagttcattaattgctctactgttactgtgtgctatgctgtccgtttcttgttcttcttcctcgtttactgtcgaggtgctgtccattactatttcgggctgatgatatttttgttgtattttttgttctgttcgagctgttttttttgtaatattaatctctctgtaaaaaaaatggtactctaataagggcctttggtatccatcattgagcgtctttggttcattggttaactccacttttttttttatcgttgtgtagattgatgaacatgttcaaagggagattatgaaccaccgatcactgaagcatccaaacataatccggttcaaggaggtaatctcttgggcctctagggaagtaatgtgtaatataatctctagttgaattgagtgttatgattgtttctgctcttttcgggaatttttttttctactgatagaaagcgatagttatctgtattcttccacgcctctatgtttataggaggacagatggaatatgtaacgtgaaagtttagttgcacatttaggaggactcttttgatggtgacttttatcgcttgaatgtcactgttttcacccctgttttgttctttttctgttttgagttctctttaacttcgaatatgctgctcactttagtgtgtatgatttgcatgaaccttgtactttgttttttccacgggcagactagtaggctaattgcctaattgcatagattcctttttgaaggaaaaaaaatcagggcagtttttttacactctgcacaaatgaaaatagtagttatttctaaaataacaaaaattaggagttattattataaaaacaagttatttacaaaagaaaaggagaagtgcatgaaagcaaaagttgctaatctgctattttcagggaactaaatgtactagtgtctggcattaattgttgagtcatgtttttcaggttaactctgtcttactactgtctgtgttctgtgtaactcagggaagttgattcttatttagattgacaatgcgtatgtgtccttttatgctgccttttactgtatcgatgttgttataaaaaattcttttgtggggagcacgcaaaagctttgcatggcattccattagagaagagagttgaatacaacaagttggcccaaggcccaaaacagacctagaaagtcttaaattaggtgctaaaattttcagggctattttaggttctttcgtcattttttcttccaagatctgttgaacagggtttttagaataaagctatccttgtgaatattgcgagcactttccgcagttctttctctgcattcatcgctgaacacatgtatttgactgtttgacgaggtttaacattcaaacttgtattgagagttgaaaaattaaagtagtccttagttttcaggtcgtgctaactcccacacatttggcaatagttatggaatatgctgctggtggtgagctatttgaaaggatttgcaacgcagggagattcagtgaggatgaggtagagaatattctccacaatctttgggactcttatgcagatttatgtcattgcattgacaaattattcattatcctcatcaggcaaggttcttcttccaacagctgatttctggagtgagctattgtcattctatggtacatgatgtctagttgacttaaaaatatcaactcttttgtagactattgcccacatttgtccttatctttttctgcttgcagcaagtatgccatagagatttgaaactcgaaaatactctcttggatggcagtgtcacacctcggcttaagatttgtgattttggttactccaaggtatgatttatgcagatactatcctctgacattcatgttttctgttgcctaaaattagtacccacctggccacccctccctttgggcctttcttttttaattttcagtcttctgtcctgcactctcaaccgaaatcaactgttggcacaccggcttacattgctccagaggtcctctctagaaaggaatacgatggaaaggtaattttgttcgcatgatttgggatgagtctctctatgatcctaccaaatagtcttaatttccatgactggactgttgaaacataattacttcgaatcttaggtagctgatgtttggtcatgtggggtaacactctatgtgatgcttgttggtgcgtatccttttgaggaccctgatgacccaaggaacttccgcaagacgatcactgtgagtaaatccggccattgcccatagcccccactcctgttaattcaaaatctgtctcaattctagtcagtctgatcatgtagcctattgacctcttttgcagaggatactcagtgtacagtattcaattccagactacgttcgagtttcagcggactgcagacatctcctgtcccggattttcgttggaaatcctgagcaggtgactcctcgtcatgaaataattcaccatttcacctagtagcttagtgatcaatctgcattggctttccaacatggtgtcaaccgacaaacattcgtaaattgcatgcatttctctttgtagaggataactatcccagagatcaagaaccacccatggttcctgaagaacctgcccatcgagatgaccgacgagtaccagaggagcatgcagctggcggacatgaacacgccgtcgcagagcctggaggaggtcatggcgatcattcaggaggcccggaaaccgggcgacgccatgaagctcgccggcgccgggcaggtcgcctgcctggggagcatggatctcgacgacatcgacgatatcgacgacattgacatcgagaacagcggggacttcgtgtgcgccttgtgatcgatagatgccaaattcgatcgatcgatcatcagctggttgaagactgaagtagcggggcagcgagctttctttgtggctgatgtgttgctgtcattcatgcctcgtttttacttctgggatcacatatgctttgtgaccaagagattgccatcgctgtggataaataagatgaatttaattgcatacttagttatattcttggcagagtgcttttgtgctgctgattctgaattttagttgtctgatcatttcttctttatgcaaattactatcgtctctcgcaattgacaaccagcttggagcagattctgttttactatcatctttgcaccgcagagtatggacatatatcgagtgcacatttacatatagggaatgcacttatatgtgtaagtaataatacaatactttggggttcatgtgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0390200, RefSeq:Os03g0390200