Os03g0390400

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Revision as of 12:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0390400| Description = Similar to Cytochrome c oxidase subunit 6b| Version = NM_001056810.1 GI:115453348 GeneID:4333018| Length = 4680 bp| ...")
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Gene Name

Os03g0390400

Description

Similar to Cytochrome c oxidase subunit 6b

Version

NM_001056810.1 GI:115453348 GeneID:4333018

Length

4680 bp

Definition

Oryza sativa Japonica Group Os03g0390400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16188812..16193491

Sequence Coding Region

16188918..16188953,16191326..16191580,16191655..16191737,16191855..16191936,16193124..16193177

Expression

GEO Profiles:Os03g0390400

Genome Context

<gbrowseImage1> name=NC_008396:16188812..16193491 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16188812..16193491 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgaagccaaggccccgtcgctcgccgaggaatactcacttcctccacaggaagccccagttgaaaaggcagttgaggataagccccaggaggctgaaagtatctctgtaacgaatgatgaaacccctcaagctgatgagactgcaacagctgtggaagtgaaccctgaaacttctgaagtgcaagaagttgctgacaagtcagaagttgaagacaccaaccctgcagcagaggaaacgaatgagactgctgaggaagaggctgaggagaaaccagagattaagatcgaaacggctccagcagatttccgtttcccaacaacaaatcaaacaaggcactgtttcacacgctatgttgagtatcacaggtgcgtagctgcgaaaggggaggatgctcctgagtgtgataagtttgcaaaatactatcgatctctttgcccaggcgaatgggttgagcgttggaatgagcaacgggaaaacggcaccttccctggacctctgtaa</cdnaseq>

Protein Sequence

<aaseq>MAAEAKAPSLAEEYSLPPQEAPVEKAVEDKPQEAESISVTNDET PQADETATAVEVNPETSEVQEVADKSEVEDTNPAAEETNETAEEEAEEKPEIKIETAP ADFRFPTTNQTRHCFTRYVEYHRCVAAKGEDAPECDKFAKYYRSLCPGEWVERWNEQR ENGTFPGPL</aaseq>

Gene Sequence

<dnaseqindica>107..142#2515..2769#2844..2926#3044..3125#4313..4366#actactcttttattatcgcctccctgctcgccctcctcccactctctcgccgccgccgccacttctagaagcttccatcgccaccaccgcagcgccccgcgccgccatggccgccgaagccaaggccccgtcgctcgccgaggtaagcggaatcccctccaccccttccatccccctcttctcgtgcgtaacccctggcgcgcgcgcgcgcgcgcgatgtgttctcctttcctttcctttcactgttcggtgattcggtagatctaaggcgccgctgtcgcctcccagatctgcgcgtctccccgtctcctctaccgagatagggtggttggttggctcggtgattaggtttcgctttgttcgtcctggcactggaaggcctttgaggtaggtaggattaggagggtttctggatgggtttggaattttggggtttgggttgctcctgatggtgattaatttcgtgctgggtggtgattgggctcgaaatttgcatctaggtgctgtatcttcagggttggaggggattggcccctgcgcgtgtggaggtttgagtaatgtggtaggttccaggatgaaaacctgaatgtgtgatgggaattgaaggattcgttgtagtaaaaaagtaagtagtttgtggtaggatttttacaacacctgaaaagtatactctccccgtttctaattatttgacactgtgtactgcattgtcacaatattaaccactacttttttatcaatagatttttaaatacttaaaccaatatgatgctattaaaacacgttgaatcatagatgtaaccatattattttcatttaacataactgaacaatacacaagtgatccaagtattctgagcttgaatagtgcagtcaacggtgtcaagtatttaggaacgcagggagcaggaacttttctagagattagatattttaggtgaggtttctatgtgtcaagttccaaacatgtttccttgtaggactaggatattgctgcatggaaaatgactattggtctaatctattaaaaaaaagaccaacgttggatattttctgtgttgtaagaacctagtcttgcatggaaatatgtaaatatctagaaactttttcgaaaacatctatttttcagaatggatttctaacttcttcttactgacagtaatctaccatagttaagttcctaataataccaaattgttccaaaaagtatgctttaatacttctcaacaagatattttttgatacaatctacgtagtttgatatctgtgctgtttttctagttgaaaatgcaaaataaaaggagaaaagtctgacaatgttgcatgaagaactaacccattgccattggcttagaaaaagtggggaggttatttgtttgtatcaacgaattctgggtcattggtttgagtgtgaattgctatgttttaacgataggaatttctcaatatgaaggaaacataggtgtgtaccaagtaacattttaggacagttaggtgtttagcatagcttatgttataaaagatgggacttaattcttgttaagagtgtaagtataatagtgtgttctagggtattttggtattttcctgtctcttgtacaatatatatttctgtgctaaatatattttgtacaagagatgggaaaggaccataatacccctaaagcacactctagtatacttagtactcttaacaactctaaggcaataaggttttcaaagcaagaaaacctcccaatagctattcctgcgatttttcttgaatcagcatatatgcttgttggtgttcaaatgaagtggtcacttttctatttcattatctgattactatgtgatattttggtccaacagtttagaaggacagttaggtgtttatcacatgtcatgtcatagaagttgtgacctaattcttgttaagagtacaagtgtcgtagtgtgttttagggtattaatgtattatggtcttttctcctctctctcgtataaaatatattttgtacgagagatgggaaaagacaacaatacccctaaaaaacactactccctccgtcccataatataagggattttgagtttttgcttgcactgtttgaccattcgtcttattcaaaaaatttcagaattattatttattttctttgtgacttactttattatctaaaatactttaagcacaactttccgttttttatatttgcaaaaaaaaattgaataagacgagtggtcaaacattgcaagcaaaaactcaaaatcccttatattatgggacgtagggagtattatacttgtacagttgtactctgaacaattcaataaggttttcaaactaagaaaacctcccaatagccgtacccgcgatctttcttgaataagtaatatatgcttgttggtgttcaaatgaagtggtcacttctccatttcattatctgattactatttaatatattagtccctatgctattgatctttggcaatctagaaagaatgatttttggacttgactttcattcgcaggaatactcacttcctccacaggaagccccagttgaaaaggcagttgaggataagccccaggaggctgaaagtatctctgtaacgaatgatgaaacccctcaagctgatgagactgcaacagctgtggaagtgaaccctgaaacttctgaagtgcaagaagttgctgacaagtcagaagttgaagacaccaaccctgcagcagaggaaacgaatgagactgctgaggaagaggctgaggagaaaccagagattaaggtttcctactgcaaaagaaaatgataggatatttgttataatgattattatactaagcatgttttaatatacagatcgaaacggctccagcagatttccgtttcccaacaacaaatcaaacaaggcactgtttcacacgctatgttgagtatcacaggtacaactatgctctttcagggaattgagtttattagttggtttactgttatgaaagaaatccattggtttagttgtgttgatgacttgattatcaaaagatgtgcttatttatcaggtgcgtagctgcgaaaggggaggatgctcctgagtgtgataagtttgcaaaatactatcgatctctttgcccaggcgaatgggtatgtatctcctgttttttgaacattgctttcagcacttttaaactcttcttccttctgtccctgtaagtaaaataggtactcatgtgacttgtggagattctttggtcctcatcacaatttttgtatctactccagtttcaccataacagcctagagtgatactgttgccataactactttaatgttagagttggtgaagttgatgattggttccaaaccaaatcctcacacctcttctttcataaaaaaagaagcggcaacatgtgggcccttcatccctccatcggcctgtgattccccatttagccaactttccttatacaaatctcatgtattgtcagaaaatttattcggtattctccattataagaaaaccaacttctgaattcccattgcaatgcatgtgcacatagttcttaaaatgattatttagatatacacgacactgcttgaataactttttaaaatattatttaaaaatttgtggtgtcccagttaatctgcctttgtattggtttagctattaacccacgatttattaaggatcagtgaattttggtcacctcataatattggtttgttaagtttgttagttggatatgttaattatctcccgagatttgttatggctacctatggctgttcatgtcatggccagttttgccctacacggttacatgactgaatggcgatagtagattctgattttaagtgctaaattgttaccttcggcaaatggcaaaggcaattgatgactcagtacatctatattcaagaaatatctgagctacacacttagttgcttctgataatttcttgagataatgctatatccttctttcaactttgaagcgattgctcttattgtcttgtgtttagcacaactgcatttacgtgtgaatctatatgtatggtttctttgtgaatgatatgtttcagcctaattactccacattggctttattggtacatactagcttgtgcaacttggtctatgcatgtgcttaaaatataagcaaatcgatacaagttttctacttgcacacatgcaaaccataattggatccacaattacttggctgatatgggtaccctttaatcaagatcatagcactatcatttaatcagaacttcaatgatttgatcctgtacaccttaacaccattaacgtgtttgattttcaggttgagcgttggaatgagcaacgggaaaacggcaccttccctggacctctgtaagcatgtgcaaaggggagaacatacgttgttgtccgggctctcttcgttggtaactggcgtcatgttatcagaatcggagggatcgtccttttttttggagagatttacaaataagagatttctttttttatttgaagaatgacatctgttgactctacctaaacgatcatcctctgcactgctgagaaactcacattacagctatgatcttcctcccttgactgatcttccataactgttttctcaggataatgtggttgctcgcttgggaaaatgtgttgacataaatcttaagttctttactttctctgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0390400, RefSeq:Os03g0390400