Os03g0392400

From RiceWiki
Revision as of 12:41, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0392400| Description = Heat shock protein DnaJ, N-terminal domain containing protein| Version = NM_001056819.1 GI:115453366 GeneID:4333027| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0392400

Description

Heat shock protein DnaJ, N-terminal domain containing protein

Version

NM_001056819.1 GI:115453366 GeneID:4333027

Length

1800 bp

Definition

Oryza sativa Japonica Group Os03g0392400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16305262..16307061

Sequence Coding Region

16305795..16307012

Expression

GEO Profiles:Os03g0392400

Genome Context

<gbrowseImage1> name=NC_008396:16305262..16307061 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16305262..16307061 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacttctccggcggcagcggcggcggcggcgtcgcgtcggggagggtgcaggcggagcggtggctggagatcgccgggaagctcctcgcggcgcgggacctcgtcgggtgcaagcggttcgcggagcgcgcggtggaggcggacccgctcctccccggcgccgacgagctcctcgccgtcaccgacgtcctcctcgcctcccagtcggtcctcccctcgggccaggccgacccgctcgccgtcctccagctccccccgtccaccaacccggccgaccacgccgccgtctcccgcgcctaccgccgcctcgccctcctcctcaggcaggacaccaacccgcacccgggcgccgacgtcgccctcagcctcgtccacgacgcctacgccatcctctccgatcccaaccgccgccccccgccgcccgtcgccgtcgccgtcccccacgcccatccaggcgccgcgtcccacccagccgcgcccgccgccgccgaatcccccgagttctggacggcttgcccgttctgctcctacgtccaccagtaccagcgcgagctcgtggggcgcgcgctcaagtgccccaacgagtcttgccgcaaggggttcgtggctattgagatctccaccccgcccaccatcgtgccgggcaccgagatgtaccactgcgcctgggggttcttccccctcggctaccccacctccgccgacctcaatggcaactggaagccattctacaagatgttcccctggaacaatgcgcccgctggtggcgccggctcgggtggtagggggggctatggtggccgtggtggaggcagcgctggtcggcagccgcagaatgggagcgcgcggggcgggtcatccagaggtagggtgaagaagacgaccgctcgcaagaaggtcggtgccgggctcaagaggcgatcattcggcggcgtggagagcggcattgagccgatggatgggcaggatggatggggtgagggtgaggagggtggtgatggacaggcagaggaggtgagggggattaacatcaatgaagaggcacagtctacagatggtgctaccaggggacatgttcacgcaagggggaatgtcagcggtggggttgtggacatgggcaccttccatctggatgtcgatccatcggaagatattttagggaatttgcagaacttgcccttcttgagggttgacaatcttgggcggatgctgtaa</cdnaseq>

Protein Sequence

<aaseq>MDFSGGSGGGGVASGRVQAERWLEIAGKLLAARDLVGCKRFAER AVEADPLLPGADELLAVTDVLLASQSVLPSGQADPLAVLQLPPSTNPADHAAVSRAYR RLALLLRQDTNPHPGADVALSLVHDAYAILSDPNRRPPPPVAVAVPHAHPGAASHPAA PAAAESPEFWTACPFCSYVHQYQRELVGRALKCPNESCRKGFVAIEISTPPTIVPGTE MYHCAWGFFPLGYPTSADLNGNWKPFYKMFPWNNAPAGGAGSGGRGGYGGRGGGSAGR QPQNGSARGGSSRGRVKKTTARKKVGAGLKRRSFGGVESGIEPMDGQDGWGEGEEGGD GQAEEVRGININEEAQSTDGATRGHVHARGNVSGGVVDMGTFHLDVDPSEDILGNLQN LPFLRVDNLGRML</aaseq>

Gene Sequence

<dnaseqindica>50..1267#cagaaaaccaaaaccatttcccccatttcctcccctcccctaccctaccatggacttctccggcggcagcggcggcggcggcgtcgcgtcggggagggtgcaggcggagcggtggctggagatcgccgggaagctcctcgcggcgcgggacctcgtcgggtgcaagcggttcgcggagcgcgcggtggaggcggacccgctcctccccggcgccgacgagctcctcgccgtcaccgacgtcctcctcgcctcccagtcggtcctcccctcgggccaggccgacccgctcgccgtcctccagctccccccgtccaccaacccggccgaccacgccgccgtctcccgcgcctaccgccgcctcgccctcctcctcaggcaggacaccaacccgcacccgggcgccgacgtcgccctcagcctcgtccacgacgcctacgccatcctctccgatcccaaccgccgccccccgccgcccgtcgccgtcgccgtcccccacgcccatccaggcgccgcgtcccacccagccgcgcccgccgccgccgaatcccccgagttctggacggcttgcccgttctgctcctacgtccaccagtaccagcgcgagctcgtggggcgcgcgctcaagtgccccaacgagtcttgccgcaaggggttcgtggctattgagatctccaccccgcccaccatcgtgccgggcaccgagatgtaccactgcgcctgggggttcttccccctcggctaccccacctccgccgacctcaatggcaactggaagccattctacaagatgttcccctggaacaatgcgcccgctggtggcgccggctcgggtggtagggggggctatggtggccgtggtggaggcagcgctggtcggcagccgcagaatgggagcgcgcggggcgggtcatccagaggtagggtgaagaagacgaccgctcgcaagaaggtcggtgccgggctcaagaggcgatcattcggcggcgtggagagcggcattgagccgatggatgggcaggatggatggggtgagggtgaggagggtggtgatggacaggcagaggaggtgagggggattaacatcaatgaagaggcacagtctacagatggtgctaccaggggacatgttcacgcaagggggaatgtcagcggtggggttgtggacatgggcaccttccatctggatgtcgatccatcggaagatattttagggaatttgcagaacttgcccttcttgagggttgacaatcttgggcggatgctgtaatgggctatggcatttgttgtgctggagaaatgctgtatgtttagctgggtcaaaacagatgtttcagggaccgacccttaccgctcttgttgtcgttattgttcttgtggcattatctcttgttgtagtagtagtttaccttgtgtttctagttacttagctggcggtggagtcccatagaagtcctatatgtgagtttgtggtatctccaaattagctgggatatgtattctgtcttaagcaaacaaacttgtggagttctctcaggatgaatttagtgattcatggatgggcgatcacttcggtttcttctagggcaatggcgagacaagtcactgagagaaagtaagtgaagctgtgagctgtctgtctttctgaatatacaaagcttcttttgttacagccatgcatttagctatttgataagattgacttggttttaattcaatattctattgtgaagttaatgctgtaacggtttttggtatgcctgcttatgatccagtgttaattaagaatctctattcgatagc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0392400, RefSeq:Os03g0392400