Os03g0393100

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Revision as of 12:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0393100| Description = Peptidase S10, serine carboxypeptidase family protein| Version = NM_001186526.1 GI:297722182 GeneID:9270128| Length ...")
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Gene Name

Os03g0393100

Description

Peptidase S10, serine carboxypeptidase family protein

Version

NM_001186526.1 GI:297722182 GeneID:9270128

Length

10982 bp

Definition

Oryza sativa Japonica Group Os03g0393100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16341886..16352867

Sequence Coding Region

16341886..16341891,16342571..16342621,16342715..16342784,16342884..16343086,16343249..16343354
,16343466..16343533,16343648..16343691,16346598..16346840,16347720..16347929
,16348445..16348525,16348527..16348593,16350405..16350667,16352132..16352252
,16352560..16352654,16352747..16352867

Expression

GEO Profiles:Os03g0393100

Genome Context

<gbrowseImage1> name=NC_008396:16341886..16352867 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16341886..16352867 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgcttgctctctgcgtcctcaccctgctccagcttagcggcggcggcgtcgctgccatctccggcgggaccaacgacggctccgagcgctggggatacgtccaagtccggccgaaggcgcacctgttctggtggtactacaggagcccgcatcgtgcgtcgtcgccggggaagccatggccgaccatcctctggcttcagggcggcccgagagtaattagggcatgttcaaaggtagagctcggtgtggtctctctctatactccacatcagcgaagaaactcctacctacaaagaactgtctctttaaccaactctctattaatacaaggttgcttcagctataaagtcatccatgctgtatatattcataggatgaaagttgtcaaggtcgatggcggcatcatcgtcgaggtcgaggtcgaggtcgacgacggcatcatcgtcgaggtcgaggtcgaggtcgatgtcggcgtcgacggcggcatcatcgtcgaggtcgaggtcgatgacagcatcatcctcaatggcaaggtcagcgtcgacgacgacatcatcatcgaggtggtcgatattattgggagacatcgtatgcttcaatttggtccgagcgaccgcagtgtcatcatcactatcaacattgacatggtcctggttcccataagtgggggtggagtgggtgtcgcaagcggcatagaagcaccattagcaagcggtggcgaagaaccattagcatgtaatgagaacagaaaacttgcagaactgaatcttcataagatagcagagattattgctgggatttgtggttaccagctctgcatatttgcatgtggtgacgacaaatccgacgtagtagctttatgtgagcttttgtccgtctgcatccatgaaggagatggggaaatatggctgccggtcgtagccgcgctcatcctagatgcagagaagggaggatcatcctgtgggcgtcggctacagctacgcggacgacccgagcgcgctggcgacgacggacttgcaggcggccagggacgccgccgagctcacatcaaggctctacccgacgagatacccgccctgaagtgtagcccgctgtaccacgtcggggagtcctacggcggcaagctcgctgccatgattggcgtctccctcaccaagtccatccatgccggcgacctcgacctcacgctcggaggtgttgttatcagggatgggtggatctcgccgacggatttctcgctcacgtacgcacggcttctggacgacgtgtcgaggctcgacgaaaacgccatcgacgatgccaacaagttggcagagaaggtgagcgagcaatccgcggcggggcagttcgccgcctcactgcagacgttcacgggccttatcgatctgatcgacaaaagtagtggcggcgttaatattttcaatttcttgtttaacaccagcggcgtagatctgcgagtgctagctgcagaggacaaacaaaaagaagtccgtggatcgccgttgatgaggtttgtcgggcaggacttgtcggggtcgtctggccccaacacgatcgagggcatcatgaacggtgtcatcaaggaaaagctcaagatcatccccaacaacctcgtgtggcaactggcgacggtcgctgttttcaacgcgctggagaacgaattcatgaagccagcaataaacgaggtagatgagctattatctctgggtgtcaacgtcacagtgtacaatgggcaagattaa</cdnaseq>

Protein Sequence

<aaseq>MATLALCVLTLLQLSGGGVAAISGGTNDGSERWGYVQVRPKAHL FWWYYRSPHRASSPGKPWPTILWLQGGPRVIRACSKVELGVVSLYTPHQRRNSYLQRT VSLTNSLLIQGCFSYKVIHAVYIHRMKVVKVDGGIIVEVEVEVDDGIIVEVEVEVDVG VDGGIIVEVEVDDSIILNGKVSVDDDIIIEVVDIIGRHRMLQFGPSDRSVIITINIDM VLVPISGGGVGVASGIEAPLASGGEEPLACNENRKLAELNLHKIAEIIAGICGYQLCI FACGDDKSDVVALCELLSVCIHEGDGEIWLPVVAALILDAEKGGSSCGRRLQLRGRPE RAGDDGLAGGQGRRRAHIKALPDEIPALKCSPLYHVGESYGGKLAAMIGVSLTKSIHA GDLDLTLGGVVIRDGWISPTDFSLTYARLLDDVSRLDENAIDDANKLAEKVSEQSAAG QFAASLQTFTGLIDLIDKSSGGVNIFNFLFNTSGVDLRVLAAEDKQKEVRGSPLMRFV GQDLSGSSGPNTIEGIMNGVIKEKLKIIPNNLVWQLATVAVFNALENEFMKPAINEVD ELLSLGVNVTVYNGQD</aaseq>

Gene Sequence

<dnaseqindica>10977..10982#10247..10297#10084..10153#9782..9984#9514..9619#9335..9402#9177..9220#6028..6270#4939..5148#4343..4423#4275..4341#2201..2463#616..736#214..308#1..121#atggcgacgcttgctctctgcgtcctcaccctgctccagcttagcggcggcggcgtcgctgccatctccggcgggaccaacgacggctccgagcgctggggatacgtccaagtccggccgagtacgcgcgcgatcgaccggtttcttccattccgtaaaccgtcacgttcctagctctctcactctctcctaactcctctattgcgtttgcagaggcgcacctgttctggtggtactacaggagcccgcatcgtgcgtcgtcgccggggaagccatggccgaccatcctctggcttcagggcggcccggtacgtactgcttcttagctctaactaagtactccctctgtctctaaatatttgacgccgttaatttttttaaacatgtttaaccatttatcttatttaaaaacttttgtgaaatatataaaactatatgtatacataaaaatatatttaacgataaatcaaatggtagaaaaagaattaataattacttaattttttttaataaggcgagcggtcaaacacatttaaaaatgtcaacggcgttaaatatttagggacggagggtgtagctagcttgtagtttgcatttcgtttcagctgtttgcagagagtaattagggcatgttcaaaggtagagctcggtgtggtctctctctatactccacatcagcgaagaaactcctacctacaaagaactgtctctttaaccaactctctattaatacaaggtaataaatagctaataaattcattgcatgtaatcaaatgtaaatttcagcagcacatatatttgtatttcttctctatagaactaacgctacatcgtgctatcataaccatataaaagaagacgatgtgcatcctaccagcacacacatccgaaattattatttaatcaaatgataagctaaattacattatttcattacataaagtagttctactttttcccaaaacgctgccatatatgtgcaactaaatctttcttgagttgcatatgtttcgcacgatcacgaatagatgaatttcttcgtaataccgcagcaaagcaagggttggggtcagatgagttcctcacttcaggtggtagaacgaacgatgctcctgggttctcatttaaatccaaaggaatttcagccatttcctgttcatcttcaactatcatattgcgaagaataacacaagcttccattatattgataacatcgccctgcctccacatccgagctagacgacaaacgatgttaaagcgagactgcaacacaccgaaggctcgctcaacatccttccttgttccttcttcacgagctgcatataatttatgttcgtctgtttgaggaagctgtattgtcttcacgaatgtcgcccactctggataaattccatcagcaagatagtaccatgtgttatattggttcccatttacactaaactgtacacgaggagcttcccctctcaatgcttcaatgaacaagggtgacttgtttaacacattgatgtcattattggatcctgcagtagcaaaaaaatcatgccatatgcgaaggtctttcgatgctaccgcttcaagaatcatggtaggaactcccttgtcaccacgagtaaattggccacaccatgagaccgggcaatttttccatgcccaatgcatacaatctatatttcctaacatgccaggaaaaccacgtgagtcagcaacctgtagcaatctttcaacctcatcactcctaggagctcgtaagtactctttgcgaaatatttcaatgactccttcagcgaattttcccaaacactccaaagctgtattaggaccaatctttaatacctcatcaagttgatccgcaggagttccatatgctagcatacgaatagcagccgtacacttttgaagtggtgaatgtcctgctctaccagtggcatccaatctattagtaaaataaggagaccattcactaagggcactcacaattcgtaggaagagaggcttcctcatccgaaacctcctacggaacatcttatctgtgtagattggagactcggagaagtagttggccacaagatccgcattgctagcttcacggtttcttggtatataccgtcttgtaccactttgatgtagacgacgaggtggctcagatgttatgttctccttcaacctgagaataatctgttcactatattcatccaaaaaggttgcttcagctataaagtcatccatgctgtatatattcataggatgaaagttgtcaaggtcgatggcggcatcatcgtcgaggtcgaggtcgaggtcgacgacggcatcatcgtcgaggtcgaggtcgaggtcgatgtcggcgtcgacggcggcatcatcgtcgaggtcgaggtcgatgacagcatcatcctcaatggcaaggtcagcgtcgacgacgacatcatcatcgaggtggtcgatattattgggagacatcgtatggtctgacaatgtagaagattggacttgtttgttggactcgacatgtactggttctatcgttctaattttaaaccacatgtatacagatatgcagatagcatgttcacacaataaaggaaacaaaatcatcatttatattagaataggaacatgtatcattatttgaggcaaggtaaaagatataaaaatcacatggcaatgaatatcatggtccaggtgacatgttcagatagcaacaaagtgaattattacatgttcatataactaggaagtaaattatccttgcttggcaatgagatcgaccagttgcatgtgcagcagcaaatcacattgcattcttccaatggcatagatgtgatccacattgaacagatcttccagatattattacctgacatactaaaaaaatagattcagttacataaatataaattttcagattcagcttcagtgagataatatatcaatatatactattcaaattcaaaagataaacatgcccaacaatcacaaatttcagattgaatcactgctcaatttcggatactgatcttaaagtcagaattggagcttgttttgttgtctgccaaagtgtccacttaggcaataattttgaagacacggagctcaatattacttctacataatagggaatagaataacagtcctatagcaagcttaaagaaacactgctccatacagcaagctattaacattatagcctatattatcatttcagcaacttgaagagatatcatctagaacatgcccacatttcaggttcaatgaaatcatatataatcaaatcacatttcaggtcacatgatatgtagattaatatgtaatctaggtcataatcaattaaatcatttccagtaaattattaactaacctcaagataagtccggaaacaagatcttcctcaaacaccttatggcagtgacatgctcggctctaatgtcatcagccatcccagttgtgtcctgtgcgagtagacaactataggtctcgaacatcttggcatccttattttcctttgcaactaatctattttcccgtgcagcaagttgagaaagctttgatgattgaacctgacgagtagataacttcttgcatttccatcatcttcatgcatcttgtgtgaatatcagattggacttggtctaacttgtctatctcttcagcatcagaaatatcgttcaactttcccatgctttcacgtgcagcccttttagcagccttttgtccgattggccatggggtttcttcaacatctgaaggtcctgatgcttgcccaagcatctctctgttatcagacgacttccttttacgatctctcttgagtgcatcattatatgcattccacttaggctgatcacagcatgcgtaccatacatctattaggacgaaccgtcctaattttttcttatcagcctcatagaacttatgggccatgtcaatccacatttagttcagagtaaccactagtatatgtgcgcttagccttcaaccaacagccttggaacagatccgtccgagtgttgagtttgtgccaccgctccttggcttgctttgggcttctccatctattctgtggtgtggttttattgtattctgtagcaacatctccccaatatttttcagccttcttatcattcccattaattaggtccattgaattgttcaaccaagcgctcatctacaaagataacaaaagaaagtgtaattatgcacacagattcacaatgcgaatcaagtaaaatttgcatcattctcactggtctgacatcctcctcttgggtccaatttagcttcaatttggtccgagcgaccgcagtgtcatcatcactatcaacattgacatggtcctggttcccagtaagtgggggtggagtgggtgtcgcaagcggcatagaagcaccattagcaagcggtggcgaagaaccattagcatgtaatggtgtgtagtgcgaagacgcgccgacaaaattgtaatgttgagatatatttggctgattgtgaaaaaaactcatgaatcctccaggtgggtgtgtaccatttcccctgcaagaagctcacaatttcagtgccataaccaattgatcattaagataaacctataagaaacaacacacacgtacatgaagaaacaacatgtaacaacctcataatctgtaaaaacaaatgcctactcccaaaaaatatagaaaccttagtttgtacagagaaataacataacattggaaatatatgtctcttcagtttcagcatgaccaaagatgtacaataacataatctttatatacctatctgaacaaacagtaaccttatggattatataccaatatttatatgtcaatttatttggactgctttaaacgatgtatttcagaaaatcttggattgctttactcattgtatttcagaaaatatatcaagtctagaacatggcaaccgtttaataatttcattcagagaacagaaaacttgcagaactgaatcttcataagatagcagagattattgctgggatttgtggttaccagctctgcatatttgcatgtggtgacgacaaatccgacgtagtagctttatgtgagcttttgtccgtctgcatccatgaaggagatggggaaatatggctgccggtcgtagccgcgctcatcctagatgcagagaagggaggtattccaagatagggagggaaggtaccagtggcagcgggggtatcagttgaggtgaagcggaagccggaagtgttggtaccggcagaggatgtctcaggcaccgatgccacctttgtccgtctcccagccatacagtcaacgccgatggagcgagtggttgaggagcaacgtcggcggcgaggtggaggggaaacgttggtggcgaggtggacgatccaaggctgcagtgaggtggaggagcgtagcagcgatgtattggactggaacccgatctgccgatttcagcgtcatatttggggatcgaagaaattggatggcgcgcatctctgctccgattcccgccctcccgtatctcgatccctcacccgcgccaaatttcttccgcgcgctttttttacattggatctggaggcccagctctgcagcaaaaaccaattctacaatggtgggctctcctcaactctgctcgttttttgcgcgagaggagccgatgcttcggcgatgtcacagatagcatcgttgtttctctctcatctatcatctctcttccacgtcatcttatttgtctatgtggcactggagagagccggctaattaatgccgttgtacgtgcccttatgatgcatgtcgtcgtcttcgtgttgagcagggaggatctggcgttggacgcggcaacttcttggagattgggccgttggacgtcgacctgaagccgcgcaacacgtcatggctgaagaaggctgatctcatattcgtggtcgggctggcagcagtagcactgcctctcctctccctgcttgtgttgtttcttcttcgatcgatcggtctttgatcagccagctcgctgatagtatctttgatggtgggcatgatgcaggatcatcctgtgggcgtcggctacagctacgcggacgacccgagcgcgctggcgacgacggacttgcaggcggccagggacgccgccgagctcacatcaaggctctacccgacgagatacccgccctgaagtgtagcccgctgtaccacgtcggggagtcctacggcggcaagctcgctgccatgattggcgtctccctcaccaagtccatccatgccggcgacctcgacctcacgctcggaggtagtaattgtgtttgtttgcagaataacaaagtttaatttgagtgcaaacatgcatatatagagagcagacaaaaaggaagtagaaaccaacaccaaacagattaacctatatgggacttcttggttaaacgatcgatttgctaattttgggttgctttggacatttgtttatgattttgttcaaaggaccaaacttaaattagttgaatatttcaattgcctaagtagaaaccaacacaaagcaggttaaccctcactgtggattactgaatttatgaaaaagtattgctgcgacatgcaaaaatatagagttgcttcctaagtatattttagaataaattaaagaaagggtttacaatgatttcaatggatggataaggaacgtgttcgcgtgtctaaaaataaggggccctactgatttctgcgacaaattaaggtttatattttttttagtttattattctaagaactttaagaattttctctagtttcttggaggatttgacaaccggatgtatagttttaaagctgcgtgacagtggaaatatggtttctctctatagaatcaccaagatcaatgcctatagctcccaacatgtattcatggagacaagttaagttgctaaatgggcattagactgtagtttatttatcaagagccaatttttgtcacgcgaagtccaattatcaagagtatggtttataattaatcaaactgaatataatgaaacacatgaccatttgaccaataggtgaagtttatcacacacttaaacacaacacattactaatagatggctttcttattagagcaattttacagttcttgaggaggtaccatgaggtaccattttttctattgtaaatttgttacctcttggtacctaggtactataaggtatcatgatgtactaaattttacactaaatttttggtacctcatggtacctcctcaaggaccgtagaattactctttttattatctgtttattgctcgatggcaaccccattactgagatatatggcttaatttctccctctgtcttaatctagctactatttgatggcaggcatattatattagtggattgatgattgatatctttatagttaatgtgatgcattagctagcattgcatagacaattgtgacttggcaattggcaaatatatatagggatatataagtgagacaaatgtgggttgggggggggggggggggaaggatgatcgagacactgtacttatagctgagttttttttttttttgactgagtgttaccgttggtggctggatactacagatctatgtttctctctctaaagaccataattaatttaaggctacataggttttttatccataattatgatattgtagaatattccaattcttttaatgtcccttagaactcggactgtaatatatagcacaaaaatacctatatgacaaaattattgggacaactatctcacattcatcaaatccaaccaatacacctagacaagaagaatggaagaggggggcagcaggggttgtccttgtggattgtacttaccatcaaatcaatggatacaaataatgggataacggatttaagttgaacttcatggagtcttttttttaaaaaaaaaacaaatgatcttctccttttcttgtataggctcaatccttcttgtgatcgagaattatgttttacattagtgaatgaaaatctgtaatttttccctttcttttaatataatattttaattgcggggcgtccctgcagtggtttgattaaaaaaaaaatagtgctagatgttttgttttgtttttcttctcagagtttatatgactgtctataatttggaagctaatttattataggcggtgagagaagtttgtaagagcgttctagaggttgtttaacgttatcgtaagtgaaatgtttgatttgatttaaagcatacttatttgttggttatttaattaccaaatattatattcaagtcattcagaggaagtcactgaccatggaataaaaattgtttgagatacttatttgtacactatttgtaaaatcatccaataattcaaacaaaggaacgtactgccaatcaattgacctaatcgaattgaagtgctagcccgagcatcccggtgtgcaagcatgtttttttttttctcgggtgaaaggatcaaactatatgcctgatgcattagaccaaatccaaataaatagttggttctccaacttaagggaaaattaagggtgaggtttttcctctcttttttttcatattttctaagtattttctctaatttactaatgtgccatgtggtggcttaatatcgtttataggtatgcttcatgatgatataagagcattcgtaggatgtttaatagatttttttactatataataataatgatagatagatagatagatagtttttttactaccttggacagctagtattagagcagtaaagatatcctatatttgtatttgtgtacagactaatagtgagcctgaagtagcttgggcccgagccctactcattaaagaattttttttagtgaattactagtacacatatatttttcagatttttctaaaccctcgtggcctagtacatcctactcgtctggcctagccccacacatagccttccccagctccccagccagccagcccaatatgcagcccattacagcccagtagcaagccaagtcagtgagtgtagatttggtatcggtgaaaaataattataggtacagatgtatacaccccatgagctaacctgcctctaccactgattaaccaaacaaagatgtatcaatataactgattagctgtgtgtatgttcattgccaatttatcatgcctaacaattttcttccacttgtctggcacacaggtgttgttatcagggatgggtggatctcgccgacggatttctcggtgagcaacaaatataccaacaccagaacactaccacacacgtctatctatctctttgctagctgctactgtattattcagaactcaaactggttgaatcaatcgcccttgcagctcacgtacgcacggcttctggacgacgtgtcgaggctcgacgaaaacgccatcgacgatgccaacaagtaagctaagctacccctactactaattaacatttgcataggagtgcttttctgaatgaatctgaacggctagctagctcgtctctaatcaaatcacattctacgcattaggttggcagagaaggtgagcgagcaatccgcggcggggcagttcgccgcctcactgcagacgttcacgggccttatcgatctgatcgacaaaagtagtggcggcgttgtaagtatctctctctctctctctatgtgctcacgttaataatactcgatttgctcatgcattaacataatgcaaactaaactgcagatatatgagtttagcagttttttgtgcttaattataacaaataccaacaaatgtttaatggttttgctattgcagaatattttcaatttcttgtttaacaccagcggcgtagatctgcgagtgctagctgcagaggacaaacaaaaagaagtccgtggatcgccgttgatgaggtttgtcgggcaggacttgtcggggtcgtctggccccaacacgatcgagggcatcatgaacggtgtcatcaaggaaaagctcaagatcatccccaacaacctcgtgtacgtgagcgtgaactagttagatacagtattcgattgtctcttcatagtcaaatttatcacagtgagctgcaataatcatactctataaaactgcaggtggcaactggcgacggtcgctgttttcaacgcgctggagaacgaattcatgaagccagcaataaacgaggtaagccaacacacaattccttatattctctcaatatgtaatttttggtgctaacaagctaatatatatagtttattaactttgttattgcaggtagatgagctattatctctgggtgtcaacgtcacagtgtacaatgggcaagtgagtactacctaacgtcaaagcttcatacgtacagtcttttacggatagttttttttctagaaaaaacatttgtattaaatgttagctaggttaacagttactaatacaaacatactgtctttaacttgcactatacgcacactatcgcacagaaaatgattttaatcttgaatactgctatctagagtaccctatagcaaacaacattttttcgagtacccgattttaatattaaacacagcgctatacgcacactattgagcagtgcgagctgcttatctgtgccatgggtttggttgggtatgttacacgttcagcacaattacactttcacgcaacccaaacaagtcatcatcagtcttgcacaaagctagcaaatcccaaataacatgaatactagataaataccccgccgcgttgctacggaaaattaagttgcataatatgtacaaataagatgaaatatgaatattaaaactaaaacaaattgatacttatgaattttgaggtctaaaaatgattgagattacttggtgttatgagagaagaaagaagagacaatttgaactatagatctatcatccaatgactagagataattggggtgatgtggtttaatgggagaagagagaaatattattaactcttagtggggatgaactatatataattataggattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0393100, RefSeq:Os03g0393100