Os03g0393700

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Revision as of 12:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0393700| Description = Peptidase S10, serine carboxypeptidase family protein| Version = NM_001186527.1 GI:297722184 GeneID:9272686| Length ...")
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Gene Name

Os03g0393700

Description

Peptidase S10, serine carboxypeptidase family protein

Version

NM_001186527.1 GI:297722184 GeneID:9272686

Length

4994 bp

Definition

Oryza sativa Japonica Group Os03g0393700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16375064..16380057

Sequence Coding Region

16375664..16375829,16375915..16375967,16376878..16377009

Expression

GEO Profiles:Os03g0393700

Genome Context

<gbrowseImage1> name=NC_008396:16375064..16380057 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16375064..16380057 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatgcgtctttaacttgtaaaattcctgatgaaattaatggtccatgtttgattaactgtctgtgtgccctgttccagatcgatgagctgctgtcttacggtatcaatgtgacggtctacaatggtcagcttgatgtaatatgctcgacgatcggtgcagaagcatgggtgaagaagctcaaatgggatgggctgaagaacttcctgagcctaccaaggcagcctttgaagtgtggctcttccaagggcaccaaggcgttcgtcagatcatacaagaacctgcatttctactggatacttggggctggacactttgtaagtctcaacatacacatgccacactactaa</cdnaseq>

Protein Sequence

<aaseq>MNASLTCKIPDEINGPCLINCLCALFQIDELLSYGINVTVYNGQ LDVICSTIGAEAWVKKLKWDGLKNFLSLPRQPLKCGSSKGTKAFVRSYKNLHFYWILG AGHFVSLNIHMPHY</aaseq>

Gene Sequence

<dnaseqindica>4229..4394#4091..4143#3049..3180#actagcatactgagccactacggccctcgatatggacaggccctatcctcctcttcttccccttgctctgctcgccctcctcttcctctgtctcctccacggcgagcgcgccgccgccgccgacgacgacctcacctccggcaccggcgacggcagcgagctctggggatacgtccaagttcgcccgagtacgtcgatcgacaaccactaatgagcatctttaattactactaagtgctaaactaaatgtaaatatgccatgttcgtcgttgcagaggcgcacctgttctggtggtactacaagagcccgcagcgggcgtcgtcgccggggaagccatggccgaccatcctctggcttcagggcggcccggtacacacttctcttcaccttgaattctaatcatgtttgagctcaagaacgctaatcgatgcatgtcgtcgtcgtcgtcgtcggagcagggagcgtcgggcgtcgggctcggcaacttcctggaggtcgggccgctggacgtcaacctgaagccgcgcgactcgacgtggctgcagaaggccgacctcatcttcgtggtgagcgatcgagaccgacgaacacgcggcggaattctcctttcttgctctgtttctgctacgtacatgagctgacttgtgtcaatggtggcgacggcgagcaggacaacccggtgggcgtcgggtacagctacgcggacgacccgagcgcgctggtgacgacggactggcaggcggccacggacgccaccgagctgctcagggcgctcgccgccaaggagatacccaccctgcagagcagcccgctgttcctcgtcgccgagtcctacggcggcaagtacgccgccacgctcggcgtctccctcgcccgggccatccgcgccggcgacctcaagctcaacctcggcggcgtggcgctcggcgacagctggatctcgccggaggatttcacggtgagaaaacaaaacgattttcttggaatccgctcacaattcaacgctgtatagatcaagctcggaaggaataattcatgacgttttcttgatggatatatatgcagctcgcgtacacgccgctgctgctggaggtgtcgaggctggacgacaacgccggcgacgaggccagcaagtaagccacggcggcggcgggccgcgacgaatcgaaagaagaaaaaaacatagctaggctctctccggcgaagtctctaattaatgacgtacgtatgtgtgaacggtgatgtcaggatggcggcgacggtgaaggagcagatcacggcggggcagcttgcggactcgcagcagtcgtggatcgacctgctgggtttcatcgacaaaaagagcgccagcgtcgtaagtgttcgccactgcacgccacgcgtagcactcacacgcttttattttgaggattttatgatcatatatactattttctattggaaaacttatcttagagataccccaagtatacaattaattaaaaaattggtacctctgtgaattgtggggataatttaggtgaaaattttgaattctgttacatattaggggaaattttcttttttaccaccattaatcttgaaaattttattttgttgatgctatctggacaccttttttttgttactcatttttttatcttttcttttgttactcattagtatatggtcagtagcaaaataaaaaataaagcttactcattaattgttaaaccatttaaattgattgcgagaatcatattattagattttgccacgtcagaacaatagtatagttttatcatcgcgttggacgtaaattactgtaagcatgagtcaaagatgcatatgacgcgaaagtccaaagaacatggtagtactattttctttaaccaacataactatccattagaaaggactttcgtttggaaacatttttcgatactgtcaaattactctcattaatctaacattgaatatattttgatactgtgtttgattaatgttgaaaatacgactatttctttttataaacttagtgactagaaaaaaacttcaaacgacatacaatatgaatatgaaagaagggagtactgatcagaggtagctagcttgtaagagtcagtttgtctaaagagataaagttgtttaggaagattgttttcgataggacaattttctcatgtttgttaggactatgttattattacagaattttcgttcttcttttgttgttttgttatcattctttgaaagagacgggatcaagtagaaaggagacaaggttcacccaccgccatctttttaatttagtacaatgcacacagaaaagggcgagaaagccgcaaaaatctgtatttaatatcagcattttgcagattatattcacacccagtcagcagtacagctagcttgatcacactagagtcgttgtttaggatcacactagagtcgttgtttaggccgtgtttagttgcagattttttcttcaaacttccaacttttccatcacatcaaaacttttctacacacaaacttccaacttttccgtcacatcgtttcaatttcaatcaaatttctaattttaacgttaactaaacaaacccttatttgcaggacatgtacaatttcttgcttgactccggcatggacccggtgtcggcagacttaccggcggcgagctcctcatcgccgtcgtcaagcagtgctcagttgatgaagtactcaacataccttagcagccaagcggccgattcaggctccaacacgatcgagggcatcatgaacggtgtcatcaaggaaaagctcaagatcatccccaacaacctcaagtgggtgtccatttctttcgctgtttcacatcacaatgaccagcacaactgtccaaatcacgttcgcacgctgatttttttcaatttattactgtccaaatcatcctcctcatccttgagaaaacgctgcaatttcaactgaactgcaggtggcaggaactgtcggatccggtctacaatgcgctggtcaacgatttcatgaagccaagaatcaacgaggtgatctactaagtattaatgaatgcgtctttaacttgtaaaattcctgatgaaattaatggtccatgtttgattaactgtctgtgtgccctgttccagatcgatgagctgctgtcttacggtatcaatgtgacggtctacaatggtcaggtaactactgactaccgagcactgacaattctgctaggtgcatagcacacacaaaatgagcaggatttatgtcacaaaagtccaaattagatggggatgcatagtttgattgattaattggtagtacatatatccagctaataagatggggattccttgcatgttaccaattgatgctggaagcatcttgagtaagcaacaagaagtatataagaataaagggtgctgctagtcagtgggagagcaggataacgtgaagccgacgagttgttgttcagaaaaggcggcaccctttctgaaatttgggttaacttccactgtaaagttcagagatcattagtgacagccacatcctgcagccaaggggtccaggcatgcctggctaggattagagggaaacttccttgcgtgaagagctctccaatcggagcacttttgctcaggagttgagtgagcagcaagagatctgcagattgcaagagccatctactctcacatgttattgctcacatggtcaaggtcaacagtttggagagaaatcatgtgttatttgaggcctgaagtttgctaattttcttttagtgatgcataactaaaaaaaaagtcattaaatcaacaaattaggtcagctagcactacaactctgtaaattcagagtagtaattcagtgcagggattgaacttccggaacaaaatattcgaaaatctcggtaatttcgccacccccagcaagcaaatatttcgtacgaatgttttggatttccccagatatttgtgaatttagccataatttattcaaattcggcaaaaatgggttaaattttcaaaaagttcgttggacatatcttaaatgtcggtgcctttcgaaagtgcaaaccctgatttggtgtgttatttttctcttctgaagcttgatgtaatatgctcgacgatcggtgcagaagcatgggtgaagaagctcaagtaagggattattttccccttccaactttttctagtttgttgaacaattcagatgtgtgatgaagagctttgttatgaatttcagatgggatgggctgaagaacttcctgagcctaccaaggcagcctttgaagtgtggctcttccaagggcaccaaggcgttcgtcagatcatacaagaacctgcatttctactggatacttggggctggacactttgtaagtctcaacatacacatgccacactactaaaaaaaaacgcatgccactactagaaaaactctagttacaagtttgatttctaaggccgtgtttaaattcaaatttttttcgtcaaacttccaacttttccgtcacaacaaatatttagatatatgcatggagcattaaatgtggatgaaaaaaatcaattggacagtttgtatgtaaattgcaagacgaatcttttgagcctaattacgcattgatttgacaatgtgaacatttgctaatgacggattaactaggcttaataaattcgtctcgcaatttacatgcggaatctgtaatttgttttgttattagtctacgtttaatacttcaaatattatgtgcccatatacttaaaaaaaattttggcacacgaattaaacacagcctaacctgaattgtacgtttacatgtgttatgttctctgcaggtacctgctgatcagccctgcattgcactgagcatgatcagtagcataacccagtctccagccagttagatatctcccatcagtaacagatatactcaagaaaagatagaaaacagaaggcaaacagatatacctcactctcaattagcagagtgacattgtaccgtttcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0393700, RefSeq:Os03g0393700