Os03g0394900

From RiceWiki
Revision as of 12:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0394900| Description = Conserved hypothetical protein| Version = NM_001056824.1 GI:115453376 GeneID:4333032| Length = 4185 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0394900

Description

Conserved hypothetical protein

Version

NM_001056824.1 GI:115453376 GeneID:4333032

Length

4185 bp

Definition

Oryza sativa Japonica Group Os03g0394900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16458994..16463178

Sequence Coding Region

16459262..16459435,16459529..16459684,16459769..16459948,16461020..16461278,16461358..16461593
,16462778..16462861

Expression

GEO Profiles:Os03g0394900

Genome Context

<gbrowseImage1> name=NC_008396:16458994..16463178 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16458994..16463178 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggggttccaaggcggaggagaagcccgccggcggcggcggcggcggcgaggattggtggtgctaccagttcggcaacaaggacgcattgattgtgaagtcctctaagaaatcacccctcgcattgagaatggttgttttcgctatgactatgatctgcgggatatttatctgcacgatgtgtatgaagcaactaggaagtgatagcttgtctagaatagtgaagatcgaggttgcagaacagctatgcaataagtctgcaatcctgcattcagaggttcactttgtgcattacccacaaccgataacttatagcaggagtgaatgcaagtgtacacctgtccggttcttcgcgattatctcgtcacaacgttctggaagtggctggtttgaaactcttcttaacagccatatgaatgttagctccaatggtgaaattttctcttcaaaagaaaggagaagtaacatttcatctataacaaagacactggataaggtgtacaatttggattggaatagtagtgcttctaagaatgaatgcactgctgctgttggcttaaaatggatgcttaatcagggtcttgtggcaaatcatgctgatatagctgactacttcaatcgaagaggagtctctgcaatatttctcttcaggtggaacctcctccgtcagttggtatctcaacttgcgaataatcatgacagatacctcaagcagttgaatggaacgcacaaggcccatgttcacacggcatatgaggccagtatacttgcaagatataagcccagactcaacacaacatcattaatacggagtctgaaacaagtagatgattacacccgtgatgctcttgaaaatctaaagagtatcaaccacattactatctactatgaggatctcatccgaaatagaacaaaacttcttgatgtcctggatttcctcaaagtgccaaggagcaaactagtcagccgacacgtgaagatacacaccaaaccactttcggagcaaattgaaaattgggatgaagtctacaatgctctaaatggcactcagtatgagagcttcttgaatgctgactacagaatatga</cdnaseq>

Protein Sequence

<aaseq>MGGSKAEEKPAGGGGGGEDWWCYQFGNKDALIVKSSKKSPLALR MVVFAMTMICGIFICTMCMKQLGSDSLSRIVKIEVAEQLCNKSAILHSEVHFVHYPQP ITYSRSECKCTPVRFFAIISSQRSGSGWFETLLNSHMNVSSNGEIFSSKERRSNISSI TKTLDKVYNLDWNSSASKNECTAAVGLKWMLNQGLVANHADIADYFNRRGVSAIFLFR WNLLRQLVSQLANNHDRYLKQLNGTHKAHVHTAYEASILARYKPRLNTTSLIRSLKQV DDYTRDALENLKSINHITIYYEDLIRNRTKLLDVLDFLKVPRSKLVSRHVKIHTKPLS EQIENWDEVYNALNGTQYESFLNADYRI</aaseq>

Gene Sequence

<dnaseqindica>3744..3917#3495..3650#3231..3410#1901..2159#1586..1821#318..401#aaagcgagagacagctcatcgcccattcgccctcgcgccgcgccgcgccgcccgccgccgcctcgccttgcctcctccgccgccaccggcgctagagccgacgctgctgcagcggagagtgcggtgccctcctcctcctcctcccccgcgcgcgcggcggcggcggcgggggtttccggagttaatgcgcccgtgaagaggcggccgcgtcggcgtcggcggagagagggagagggagagcgagtcttttgtgcgggtggttggggcgtgggcggtggcgtgttcaaggcggggagctacgtttcctgccggaggagatggggggttccaaggcggaggagaagcccgccggcggcggcggcggcggcgaggattggtggtgctaccagttcggcaacaaggtgagattttctttttcctttttatttttctcattttttttctccactgttttttgcttcagttccagtgttccacccacctttccttgctagcttcaaggacgaatccttgcaaactttatcctttgttgtcatttctgcctgcattcgccgctgccttgtagttaagttcatcgttttctccttcgtttcaagaaacttaaaacttcggccaaatttttggtgagagccgcgtgaggagagtaaagaggataataaattcctcttgggtgttgctttaatgcggagcggtttcgatttgtcggccgtctgatctaaatctttaattatcttgtttaaatcttttttttccgtttctgtctctcatcttagtacagtaccggtttgtacctaaaatgttcttcagaccggggatgagcacgatttcttgcatttcttcttcttcttcttcttcttcttcttcttttgggcttaagttttctagccctgtgtttctattggtggacacgtttggaatctcttttcatttctggtatcctgctagctatacgtaatcgtgcaatttatcattcatgccccgtttgatgtgcaattttttgtttttgttgggttaaatgcatgtttttattttctctattttccaattggtcaagtattttgtatttcgcctgtcaattcttgcatttcttccatcccagtcaaagactagtggggataaatcttgggggtacagtaagtgagtaataatacagttaggagaaggaacacttaaagattggtagtttggtagtattgcacagtacacagaaaaaggggatttttgattctttggcttgtgatccattattgattaaggaatatgatgttgggcaggtacatgggccatttgccctcttttggaggtaacacctgggttagttcagtttatgaatgaaggaccagttacctttcaaaatctgatctttcctgtttgtttccctgtcatgccaacatagatgcttctaaggtcatatgcttgaaaaatgattatgtaatcgctcttgattatatctatggattataacttgtaggtctggagcagaaagctaaaataaatcaagtgttagttgtgatgtgcctatagatctgagtagctctgttttgtttctactgattaacttgtattgattggaccttcttcgcaggacgcattgattgtgaagtcctctaagaaatcacccctcgcattgagaatggttgttttcgctatgactatgatctgcgggatatttatctgcacgatgtgtatgaagcaactaggaagtgatagcttgtctagaatagtgaagatcgaggttgcagaacagctatgcaataagtctgcaatcctgcattcagaggttcactttgtgcattacccacaaccgataacttatagcaggtgagagttgtgctgcagtggtttatgctatgctatatactttgattgtgtaatgtttgatatgatttttttttcttaggagtgaatgcaagtgtacacctgtccggttcttcgcgattatctcgtcacaacgttctggaagtggctggtttgaaactcttcttaacagccatatgaatgttagctccaatggtgaaattttctcttcaaaagaaaggagaagtaacatttcatctataacaaagacactggataaggtgtacaatttggattggaatagtagtgcttctaagaatgaatgcactgctgctgttggcttaaaatggatgcttaatcaggtgagaagaagagtgaaatctagattaacattttgtttttttttaattcaccctccttgcccttcctcgaagtttgttattttttttacttgataagcaaaagtataccccaagtaaactaaatattagaccacattttactcaatttatgaaactatggaatagtttcatgtggccctgttcggttcagttgtatctcaatgatcatgactgggcaagaatctcttccagtactgttggctgctgctgacacacatgcatgttccattctagatgcttgtgatttaggtatgctttattgaatatcatgtagcgagtacggccttgcttgtaatttaggaactgccggcttgtttgccatgaattgactcttttgtgcaatcatgaacacgatcgatctcttgatttatgcatcctgttgttctcaaggagattgagtataggtgttatggcttggtcccccccttagtaataactcccattaccaatgtagtgacatctgttgtgtgcacaatacaattacaatcctgcttctactatccataactatgcttgatggagcatatggaaatacaacccattcttgtggtagagcattttccagtcatggctagaaaatgacatccttctacaccagccagagtagtacccttttttctgatatggttacctgttaatgcattcaaatattactcctttttatgtgcttaactctggatgagatcacacatgaatatgattgttagggtgtcatgctctctgttattatcctgaaaacaccgtcattattgaaactgaggtagtcaagaccctgctggtttaaacaaagtgcggtgtgcatggtgttatgtgatagtttcgaattataactttttaattaagtagatctggacacacatagacttacaatctccataatggctataatcctttgtagaagtaccttctattccaggtttcaccatatcagtataaatgctttatgcatagacaaatcaaactaactaatcatgcacatggttaaaatgatggcaaagcagaataagcattcttctgatattatgtcttcagggtcttgtggcaaatcatgctgatatagctgactacttcaatcgaagaggagtctctgcaatatttctcttcaggtggaacctcctccgtcagttggtatctcaacttgcgaataatcatgacagatacctcaagcagttgaatggaacgcacaaggcccatgttcacacggcatatgaggtagtacttgcccaattatggcttgcaaatttctgtactacccctggtcagaatttgatctgtattttctaccttgttatgcaggccagtatacttgcaagatataagcccagactcaacacaacatcattaatacggagtctgaaacaagtagatgattacacccgtgatgctcttgaaaatctaaagagtatcaaccacattactatctactatgaggatctcatccgaaatagaacagttgagttttgcggataatctgtcgagtgataatgtgtagctgttgcatttcatcatgctgcttacatgtattgccttgtcttgcacctgcagaaacttcttgatgtcctggatttcctcaaagtgccaaggagcaaactagtcagccgacacgtgaagatacacaccaaaccactttcggagcaaattgaaaattgggatgaagtctacaatgctctaaatggcactcagtatgagagcttcttgaatgctgactacagaatatgacagtgtgccttcacactccctgtatagatatatcctttttctggttacatttctttttaaaatagctggccttgatgtgcctggcgaaaattttgatggtgcattgccacggttgcccacgagtgttctttgataggttcactaattgtcatagcagggttttgttttttgttttatgttttctgtaactgatatgctcaggattctaatcttgtgtattgcagtgcttattcttctcccatgttaatgatatgcatgtttccagctc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0394900, RefSeq:Os03g0394900