Os03g0395000

From RiceWiki
Revision as of 12:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0395000| Description = Similar to Heme oxygenase 2 (Fragment)| Version = NM_001056825.1 GI:115453378 GeneID:4333033| Length = 3360 bp| Def...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0395000

Description

Similar to Heme oxygenase 2 (Fragment)

Version

NM_001056825.1 GI:115453378 GeneID:4333033

Length

3360 bp

Definition

Oryza sativa Japonica Group Os03g0395000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16475031..16478390

Sequence Coding Region

16475569..16475661,16475774..16475881,16476725..16476948,16477781..16478348

Expression

GEO Profiles:Os03g0395000

Genome Context

<gbrowseImage1> name=NC_008396:16475031..16478390 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16475031..16478390 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgctcgccgccgccgtcgccgcctcggcggtcgtgccgccgcggccgcctcctccgccgccgcggagagcgcggcccttgcgctcctttactggactaatactaacgagggacctagcagccctaacggtggcccgctgcgctccctcccctcctgcccccgcggcggaggcggaggcggaggcggtggcggtggatgaggcgccgccagcgaagccgcggccgcggcggtacccgaggcagtaccccggcgaggcggtgggcgtcgccgaggagatgcggttcgtcgccatgcgcctccggaaccccaagcggaccaccctcaagatggacgatacgggggccgaggaggaggtgggcgatggcgtcagtgaggatgcgtcggcgtcagaggaggaggaggaggaggaggacgacgacgacgtggttgaggaggaggaggagggagcggggttggagggggagtggatgccgagcatggaggggttcgtcaagtacctggtggacagcaagctcgtcttcgacaccgtcgagcggatcgtagccgagtccaccgacgtcgcctatgtttacttcaggaaaagtggtctggaacgctcagctagaattacaaaagatttggagtggtttggagggcaaggaattgcagtaccagagccaagtactgctggatcaacatatgcaacttatctgactgaacttgctgagagcaatgccccagccttcctttcccactattacaatatttattttgcacatacaactggaggggtggctataggtaacaagatatccaagaaaattttggaaggaagggagctagagttttacaaatgggattctgatgtagaacttttgctaaaagataccagggagaagcttaacgaacttagcaagcattggtctcggaaggacaggaacttgtgcttgaaagaagctgcaaaatgtttccagcatttggggcggattgttcgcttaatcatcttatag</cdnaseq>

Protein Sequence

<aaseq>MPLAAAVAASAVVPPRPPPPPPRRARPLRSFTGLILTRDLAALT VARCAPSPPAPAAEAEAEAVAVDEAPPAKPRPRRYPRQYPGEAVGVAEEMRFVAMRLR NPKRTTLKMDDTGAEEEVGDGVSEDASASEEEEEEEDDDDVVEEEEEGAGLEGEWMPS MEGFVKYLVDSKLVFDTVERIVAESTDVAYVYFRKSGLERSARITKDLEWFGGQGIAV PEPSTAGSTYATYLTELAESNAPAFLSHYYNIYFAHTTGGVAIGNKISKKILEGRELE FYKWDSDVELLLKDTREKLNELSKHWSRKDRNLCLKEAAKCFQHLGRIVRLIIL</aaseq>

Gene Sequence

<dnaseqindica>2730..2822#2510..2617#1443..1666#43..610#gccgtgcaggatgcccgagtggataacccgttaaaccccccgatgccgctcgccgccgccgtcgccgcctcggcggtcgtgccgccgcggccgcctcctccgccgccgcggagagcgcggcccttgcgctcctttactggactaatactaacgagggacctagcagccctaacggtggcccgctgcgctccctcccctcctgcccccgcggcggaggcggaggcggaggcggtggcggtggatgaggcgccgccagcgaagccgcggccgcggcggtacccgaggcagtaccccggcgaggcggtgggcgtcgccgaggagatgcggttcgtcgccatgcgcctccggaaccccaagcggaccaccctcaagatggacgatacgggggccgaggaggaggtgggcgatggcgtcagtgaggatgcgtcggcgtcagaggaggaggaggaggaggaggacgacgacgacgtggttgaggaggaggaggagggagcggggttggagggggagtggatgccgagcatggaggggttcgtcaagtacctggtggacagcaagctcgtcttcgacaccgtcgagcggatcgtagccgagtccaccgacgtcgcctgtgagttgcgattcctactctccaaatccccgccttcccaatgcaattagaatatcctaattcaatgttgttccttaatcagcttagtcttcagtttccaatgcaattggaatctcctaatttttcaggaattatagatttagaatatgacatattgacttgttggtaggatggtaaaatgtgtcggtaagaacatgtttgggggatacaagctaggtggtaggaattccatttttagtgctcacttgggtatgcggcgaaggttgcaattattttggcaatatgcaaggttgaaatttaaggttgtgattattttgatggaacttgatgcatggtgtgaagtcgtggcgtgaaatgaaaattgtatggattacaattttggaaggcatttactgccaaatggtggaagatgcactttagcacaatacatgttctgcgtgtgcagcaatcatcctacggctgaatctcctttagtggtgcaccgtgaaagaaatgatcttttgggatgttctggagtatagatggcagaccatattggtaatgaagcacattgctggcatcatgcatcatagtgtacttgagcatctccgcgaagatctccgcatcgatttttgtcagtgatattgttttctgacaacttaattagtgtgagacaccaaccatgttgcctagaatgcttgccaaattgaattgttcagcactcggtagtatatgctacatacttttacgtatggctctttaggggcattcagtacctctgtttggaactttgttcaatcactgcaacagaaactgcagttacttacatatcatttatgcaattttcattcagatgtttacttcaggaaaagtggtctggaacgctcagctagaattacaaaagatttggagtggtttggagggcaaggaattgcagtaccagagccaagtactgctggatcaacatatgcaacttatctgactgaacttgctgagagcaatgccccagccttcctttcccactattacaatatttattttgcacatacaactggaggggtggctataggtaacaaggtaatgctattcccatattggatttaagtccccattaagttgtgtaatgaactgttgatatatatactcatgtttcatacctaacctgattaaatatccattatatgtctattaaactataaacaaaatataaaccagcagatttaaatgaaatactgagttcaacgctactttcttatcagatgagatgatacattgtgatttcattgtttcatgtctcaacatgtttctcattaaatggattggcagcacggagctttttgtatggagttgacaaaagagtgtaaagctgaatatctagactgatacatttctattctgggtatcagatattcatatataaagttcctctgttagctggtgatacagggctatttaaacatttggtttctattttcctttgatgtagcagcttgtggccaaaattgctaccaaatccaccaaaatatggcattgccaaagtttagtgatggatttgcgaatcaacattttggctagacattgacatccattggctccaaccaaacagccttataatagcaaagaatcttcttaaacaagaatagagagatagttgctttgttctccccatctcttttgtgattttgagctcacctgcatgccctcttaacctttttgagcgaaatacaagttctgtttaagctttcatatttcccctaaattctcttcacacttgcaccatcataataatgatgctagataatttgttcagtataaaggcaagtttactttgtagtttgtattattacaactctgtaagttctttgaaaacaaaatttatttaattgctctctgaagaagtattagtttgaaacgtaacagatatccaagaaaattttggaaggaagggagctagagttttacaaatgggattctgatgtagaacttttgctaaaagataccagggagaagcttaacgaacttagcaaggtaaccgcctcaagatcactttcttttattttcttgtaagctcgaaactggaatttgccacagaagttatatgcttatgtaacctgattagtctatctgtcatgctgtccagcattggtctcggaaggacaggaacttgtgcttgaaagaagctgcaaaatgtttccagcatttggggcggattgttcgcttaatcatcttatagttcctcatagatgagcaactgatcaaatcaacctataatctattcctgaagacaggaaagctagagatatattaaacttgaggcttagtgcagtcatttttgtcgaagactacacgtcttaactatgttgaagtctggtacagaaggatcttctggtgtgagactgaagctgatcagcgagcactatcctggagattgaaaacaccaggccacaacaatagcctcttttctggcttgcatggtggagctgctcgttggagtgagctcttgctttcagcaacttcgaactgtgcaaagttgaagatgcttgctgctgtcgatcaggatctcacgcgttcaatcgcaatgatgccagcctgacacaattcacttagcagcagaacaccatgctagccagccaggatccccccatgcctgccaaagcttcgtctcctcttgtacctcaccacattatccatttatccttgcaatgaattcgctttgcttgtaccaatcctagctactactactactaccatcttacattatccttgcaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0395000, RefSeq:Os03g0395000