Os03g0395900

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Revision as of 12:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0395900| Description = Conserved hypothetical protein| Version = NM_001186530.1 GI:297722190 GeneID:9268882| Length = 6384 bp| Definition ...")
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Gene Name

Os03g0395900

Description

Conserved hypothetical protein

Version

NM_001186530.1 GI:297722190 GeneID:9268882

Length

6384 bp

Definition

Oryza sativa Japonica Group Os03g0395900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16537404..16543787

Sequence Coding Region

16542980..16543025,16543285..16543383,16543485..16543540

Expression

GEO Profiles:Os03g0395900

Genome Context

<gbrowseImage1> name=NC_008396:16537404..16543787 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16537404..16543787 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtcggtacaggggtcgaagcaggagccttagccgatctccaccaagaaggcgacattatagcagaagccgtagtaggagtagaagtccaaggaggtaccattcacgatcccagtctcattcccgttcgccttctcgctctccaaggtacagaagcaggtcaaggcactgaataccagctgcaccaatcaccaatgaagtaa</cdnaseq>

Protein Sequence

<aaseq>VGTGVEAGALADLHQEGDIIAEAVVGVEVQGGTIHDPSLIPVRL LALQGTEAGQGTEYQLHQSPMK</aaseq>

Gene Sequence

<dnaseqindica>5577..5622#5882..5980#6082..6137#gtctcgtctagggttaggttccccccctcccaacgcccaacccaaccccctcgcccttccagaaccttccagaaggaaaccaaccgacccccgccgcgatgtggcacgaggcgcggaagtcggagcggaaggtccacgacctcatggacgccgcgcggcggcgggcgcagcgccgggccgcctacctcgcgcgccgccgcggggacccgcaccagtccctccaggtctccggcgcgcgctgccgcgtccaccgcgacgacgcgctctaccaggccaccgaggaccagcagggactgtgcgttgctacttctcccctcccccccctatatatatttatatgcctctccagtctccagtttgatttgatgtctttgatgtggtgccaccgtatatgcgaatgcgatgctcgcttatagttttaccagtgcgctggatttgattgaattgacaatacagtgtgatagttgcgtatctcgtttactgataattcaactcgttgatgcttcctgtgacaactgatcatctatttgttgggtttgggtaggatctgtttgtgtgggccgcgccattgtgtgaagggatggggattagttcatgttaatgacagttccagtttgcagctaattgtttggttcagttggatgtgattgagtgcttgttcctgatgtagttaggctaactgctagtgattctatttctgcgatgggttagtcggtctggtacctttgtcgacggtttcatcaattagtttcttattcggacaatgctataggttttatgtattgcatagttggagcaacagcctggatgttgatccacggttgagtttcttacgcgctgcacagtttctttatcttcttcattgcttaaatggatgttcaatgcagtctgtttggtttggagaatatcttggatgtatatctgttgaatctaacatagttcttcgaggatcactggttttgtagaccagatttgcctagataccatcgcatccaaaccatattgagtggcaaatacgttgcagcatgtactgcgatccaaacacaggattgacaggtgctgcagaagttctggaagtgtacatgtttcgcacatttatagcataacacactaacgtggcattaacactccaattggcatgttttggaggagtgtaagagataatgttttgtttgacattagcttgcacataactgcaatacaatgttggacataccagttaaattaattcagaacaatatacatatggtttaacaactctattttttttcttgtttcatttccttgattgtgttggtattgtctgaaagtgcaacatcactgtgttggtgttttatcaccatgtgttgatgctagtgatttgattggtctaagaaacattatacacgtttctatggtgcttatattgtcttcctacttgtgatatataagtaagaaagtgttttgatcatgagaaaggaagtttactaccatgactgtttcatctgaatggtactaattattgactatactctataccttgcaggataccatggaatggaaaacaagatgttttgattgacaggtactttttcctgagtcatctaaatatttcataacaatacaattgatattattcctcatgattgcagatttgatggccgcgcactacttgacttcatccgtgactctagctctcggcctttccgggtccaagagaagtctgaagaagaggaagagttagaggagtttgttaattttgaacgttaccgggatttgattaagcatcgacgtagaggatgtcggtacctttttggtttctctgctatattgctattatttgtaggagtttgctgtctttgttcattttcttttgtgcttattggtttgtcttggcgcatctctctctctctctctctctctctctctctctctctcttcatggccttgtcagctcctaattttggttccctaagtatttacattacctagttttcatctgcagtttctgatgaggcgggtttgcagcatgtttcgcaagagttggaggcaaaggctattcttccttttagctttgagaagtaggtctacttttactatgcctcacttcttacatgcgtttcttaaggttcataacctataattggaaaagttaagttgactgcttgtgctttctgcaaaggatggcaaatcctagcatacatatttgatgacaacagaccacaattactttttgtactttgtcaagcttattatcattccttacacaaaaatattggttagtaatttttgttctggaagagcatgtttgtgtggcatgttgtgaacttacaaacaaaatatactggcagttgatgattatatatggtgatatccttgcaaatttctggaaaccacaatgtgaaagctgtaatttttgtctatatttttcacatctcacaggaccagccgaataaatgcacagatacctgttttggtttgatgtacaaacatgtgcctactgcagagtgcccaactatgaaagagtcgccttcttttaatatttttcttagtatatattgaataatttattaaagtggtattaatatttcatatagttctaaattaatatgtgactacctgcctgtcaaagtatattcatgtttgcctgaaaatggaacattggtatgtttagtccaacttttggaattaaagttgacattcacatgtatagtgtgtatgagaccccttatttgcataaatttcttagcgtacttaaggaaggagatatgtaggtgcttattttctggtgccttgactactgactagcataaggcaccgttcttctttggggcagctacttccctgttttttgttacttcctccgtttcacaatgtaagactttctagcattgcccacattcatttagatgttcatgaatctagatatatgtatgtgtttagattcattaacatctatatgtatatgggcaatgctagaaagtcttatattacaaaactgagggagtagtatgcttcctaaactgttaaacaatgtttttctttcaaataatttttatacagaagtttctttaaaaagaaaatcaaataaacccattttccaaatttataatagcaaatgcttaattaatcttgcgctaacgatttttctcgtttcgcatgccatcaataagctcagccaaagagctgattcaaacgctgcctaaatcaactataggcaaatcagcaaaacatgcttaagctaggagctaggcaatcacttgttttgtggtacaacttgagtttaggtgtcacattgtgtagagggttcctttgagatgtcctgactcctgcgggatttaaaatggttacgcttataagctttggttatagaaaaaagtttggtggaccaaataatctcaattattagtaggtgcacatgccagcaaaaaggccagaaagtttatcttacaagttatggctcaaaagctggcaaacatttctaattcatgctgaaattttcagaagtttacacataagaattgtaaacgagcttatgattatatgcactgctttagatagattttatttttatgaggcccagaatttctgtcaattggttctgtttttgtaggccttcatacaatttatgtttttatccctacaattttcattaatagatgcagttttttagacttacattatttaattgattctattttttttcacttgtttctggcagacctcaatcctcacagacccctgctagcaaaggcacatattcacaggtgggttactcatataaaggggatggaaatgaagaatctgaagatctaaagagtgatgaggaggatgaagaggaagaagatgaagaggatgaaaagggcttcagtagtgatgacagcagtgatgaacgaatggaaagtatagccaaggaatttggtgtaaaacgatataactggcttgtttacatggacaagaaggccaaggaagaggaaaagcgccagaaagagattatcaaaggcgatccttccattgttagtacatttgtagttttaaatatagcgtatgttgcttgcctgtagtgagagctgacaaaatacactatgcagaaaaagctgagccgcagagagagaagaaaagtttctcaaattgagagggaaagagagcgggaagcagcacgttctgttggaagggtatcttatcgtgatccttataggtaatgttgcttgttcgctctataattgggaagatgaagtaacagaatgacaagtattgttattacaatattcatatgctcaacatattaaatttatagggaacaaaggagaagtccgtcatatgattcgtattcaaggggcagaaggtgtgctcaactttcactttaattttttagatgtaaaatctttgcgttgattaacctgcaattatttcatgatggcagatcaaggtcaagatcaagatctcgttcaccttcgtattctagacgccatggccgtggtacacatgctgaaagcaactaccgaagcaagccaaagactccaagggttgaatacatcactgaatttggaggttcagatgacaccagtgacctgaaagttgcagggatatctccaccttcatctccaatacgagttggcatacctaaccggtcggggaactcgacctttaatatttgcaaagatacattgggccatctttctctgctgcagcatattgtcatggtcctggtattctaaaagctgaacatgtcaaagagtaggatagttgaagacagggtcaagatggcatttatatgctataaactgtaaaatgatattggatttgtaggtagacatgtgaagcaataggtggcatatgtttactgagcaggaagatgatttagctcgtggagcttctggcctaagtttgtttactcttccaattcgttttgcctataataccatttctttcctgcaggtcatcaggtggccaaattcttgaggcacttcacagtgatcctgcatcttctttgtctgtggagcaggagaaaagtacaaaaaatttgaaagcgcccaccaggtttgtcaacatgattacaatgccatgaaaaacaagagagaatcccttatttctaacagcactgagtttctaacagatgttatccttatttctctgcgatcgttttacactactctgagttatcatacaactgtctctagtctgtcttagcttgagcatgtacctgattccagggtattgtcctgtatcttcatcatttacgaatgtgtttactaactagtcaactattttctgttgacagcacatcagcactagtcaaactaagcaagggtgccactggggggcctggcaaaaccgtccggactgaaaagaaagaaacaccacaagaacgacttaaaagaataatgagcaaacaacttaacaagcaaagtatgtttttattccattcttctgtatgcactaatgaatttgaacaatgctatccatctcttagtccatgcatgcaatgaagcatactcagtttttgtttgtctgtacagttcgaaaggacactgctgctgagatagcaaagaaacgagaacaggaacgccaaaggcaggaaaaacttgcggaggtaggtcggtacaggggtcgaagcaggagccttagccgatctccaccaaggtaattgaattgaatcagtattcatcacatcaatgcaatcttggacatgaaactgtagggctgtgatagaatctgcttgcttcctaaataattcaagctgtttcacagttcacgaaatgacgaatttgccaaaaggatatttgtatttttagaatactacagattcattatattttcttaacaaaatatgattttgacaagaacacctgatgctgattgatacattgtcatgaaaaaaatatcatggtacctggtgcagaaggcgacattatagcagaagccgtagtaggagtagaagtccaaggaggtaccattcacgatcccagtctcattcccgttcgccttctcgctctccaaggtaatttagcaagcgtagttatttcgaatcagatgccgaacatccctatccctgctacttgttactagatagcatctgaaatagtaaatatggccctgcaggtacagaagcaggtcaaggcactgaataccagctgcaccaatcaccaatgaagtaacccgtctctgtactctatatattcacattgtggtgtttttagattttatttgcttttgcttctccacgttattatgttttaattcttcttgactgttagaagcaccctggatccctttcaaccttgcttggtgtacgtagctgtatctcttggtttaaataagagggtcccttggctacaagacgcatgcacttgtcacttatcagctttagggtacggctttttattgagcacgaggcacaatttt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0395900, RefSeq:Os03g0395900