Os03g0396500

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Revision as of 12:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0396500| Description = ZIM domain containing protein| Version = NM_001186531.1 GI:297722192 GeneID:9271179| Length = 702 bp| Definition = ...")
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Gene Name

Os03g0396500

Description

ZIM domain containing protein

Version

NM_001186531.1 GI:297722192 GeneID:9271179

Length

702 bp

Definition

Oryza sativa Japonica Group Os03g0396500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16576145..16576846

Sequence Coding Region

16576145..16576484,16576578..16576846

Expression

GEO Profiles:Os03g0396500

Genome Context

<gbrowseImage1> name=NC_008396:16576145..16576846 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16576145..16576846 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgccgtcggcgcagctggcggtggcgccatgctccccgccgccgccaggcgcggccagccgccgcagccaccgtgcatgacgacggcgccggagcagcaggccgccgccggaggcgccgtgatctggccggcggcggcggcggcggaggccaaggagaagatggtcgtcgacgcccggaccatgcagctcttccccacgcgatccgcagacggcgtcgtcgtgtcgccggctccggcgccggcggcggcccaagaacgacgacggccggaagtgcatgtgacgccgtcggtgccggcgacggcgccgacggcgccattgaccatcgtctacggcggccaggtgctggtgttcgagcactacacggcggaggcggccgagaagctggtgcagcgcacgcagcatctgctggctgcggccgccggcggcggcggtgggaacaaaaacaataatgtcaccgttgtgactcccccgccggacgagccgcccatgctgctgccgccgccgcagatgccggctgcctcgggggtctccgccggcggcgtgatgccgatcgccaggaaggcgtcgctgcagcgattcctccaaaagaggaagcaaaagtga</cdnaseq>

Protein Sequence

<aaseq>MDAVGAAGGGAMLPAAARRGQPPQPPCMTTAPEQQAAAGGAVIW PAAAAAEAKEKMVVDARTMQLFPTRSADGVVVSPAPAPAAAQERRRPEVHVTPSVPAT APTAPLTIVYGGQVLVFEHYTAEAAEKLVQRTQHLLAAAAGGGGGNKNNNVTVVTPPP DEPPMLLPPPQMPAASGVSAGGVMPIARKASLQRFLQKRKQK</aaseq>

Gene Sequence

<dnaseqindica>363..702#1..269#atggacgccgtcggcgcagctggcggtggcgccatgctccccgccgccgccaggcgcggccagccgccgcagccaccgtgcatgacgacggcgccggagcagcaggccgccgccggaggcgccgtgatctggccggcggcggcggcggcggaggccaaggagaagatggtcgtcgacgcccggaccatgcagctcttccccacgcgatccgcagacggcgtcgtcgtgtcgccggctccggcgccggcggcggcccaagaacgacgacggtgaacatatattgcaaattaaaggcctcttaatttccggtatcgcctaatgtacgatcatctctcttaatttacttggtcgtgtacatgcaggccggaagtgcatgtgacgccgtcggtgccggcgacggcgccgacggcgccattgaccatcgtctacggcggccaggtgctggtgttcgagcactacacggcggaggcggccgagaagctggtgcagcgcacgcagcatctgctggctgcggccgccggcggcggcggtgggaacaaaaacaataatgtcaccgttgtgactcccccgccggacgagccgcccatgctgctgccgccgccgcagatgccggctgcctcgggggtctccgccggcggcgtgatgccgatcgccaggaaggcgtcgctgcagcgattcctccaaaagaggaagcaaaagtga</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0396500, RefSeq:Os03g0396500