Os03g0397600

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Revision as of 12:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0397600| Description = Glycoside hydrolase, family 17 protein| Version = NM_001186532.1 GI:297722194 GeneID:9269962| Length = 1479 bp| Def...")
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Gene Name

Os03g0397600

Description

Glycoside hydrolase, family 17 protein

Version

NM_001186532.1 GI:297722194 GeneID:9269962

Length

1479 bp

Definition

Oryza sativa Japonica Group Os03g0397600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16621961..16623439

Sequence Coding Region

16621961..16623439

Expression

GEO Profiles:Os03g0397600

Genome Context

<gbrowseImage1> name=NC_008396:16621961..16623439 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16621961..16623439 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggatcgtgcgcgcgggtgcatgcgctggcggtggcgtgggcggtggcggcgctgctgtcccgcgcgacgccggcgggggccctggcggcgaactggggcacccgcgcgctccacccgctccccggcgacgtcaccgtccgcctcctccgcgacaacggcttcgacaaggtcaagctcttcgaggccgacccctcggcgctccgcgcgctcggccacacggggatccaggtcatggtcggcctccccaacgagctcctcgccccggtctcctcctccgtcgccgccgccgagcagtgggtcctccacaacgtctcctcctacatctccaagctcggcgtcgacatccgcgccgtcgccgtcggcaacgagcccttcctcaagtcctacaagggcaagttcgaggccgccacgctgcccgccgtgcagaacgtccaggccgcgctcgtcaaggccgggctcgcccgacaggtgcgcgtcaccgtcccgctcaacgccgacgtctacgagtcgctcgacgggaggccgtcggcgggggacttccggcccgacatcgccggcctcatggtcggcctcgtccgcttcctcctcgacaatggcgggttcctcaccatcaacatctaccccttcctgtcgctccaggccgaccccaacttccccgccgactacgcctacttcccgtcgccggggtcgccgccgtcgcaggccagcgtccaggacggtggcgtgctgtacaccaacgtgttcgacgccaactacgacacgctcatctcggcgctggagaagcacgggctgggcgccatcgccgtcgtggtgggggagatcgggtggccgaccgacggcgacaagagcgccaacgccgccaacgcgcagcgcttcaaccaggggctcttcgaccgcatcctcgccggcaagggcacgccgcggcggccgcagatgcccgacgtctacgtgttcgcgctgctcgacgaggacgccaagagcatcgacccgggcagcttcgagcgccactggggcgtgttcaactacgacggctcgcgcaagtacaacctccgcctcgccggcggccggagcatcgcgccggcgaggggcgtccgctacctgtcgcggcagtggtgcgtgctccggccggacgccagcccggccgacccggcgatcggcggcgccgtcggctacgcgtgccagtacgccgactgcaccagcctcggcgccggctcgtcgtgcggcggcctcgacgcccgcggcaacgtctcgtacgcgttcaatcagttcttccaggcggccaaccagatgaagggctcctgcaacttcaacaacctctccatgatcaccacctccgacccctcccagggcacctgccgcttccagatcgagatcgacaccggccgccacgacctcgccgtcgcctcctccgcatccgccgccgccacgtccgtcgccgccgttctgctcctcgccttgcttggcctcgtcatataa</cdnaseq>

Protein Sequence

<aaseq>MGSCARVHALAVAWAVAALLSRATPAGALAANWGTRALHPLPGD VTVRLLRDNGFDKVKLFEADPSALRALGHTGIQVMVGLPNELLAPVSSSVAAAEQWVL HNVSSYISKLGVDIRAVAVGNEPFLKSYKGKFEAATLPAVQNVQAALVKAGLARQVRV TVPLNADVYESLDGRPSAGDFRPDIAGLMVGLVRFLLDNGGFLTINIYPFLSLQADPN FPADYAYFPSPGSPPSQASVQDGGVLYTNVFDANYDTLISALEKHGLGAIAVVVGEIG WPTDGDKSANAANAQRFNQGLFDRILAGKGTPRRPQMPDVYVFALLDEDAKSIDPGSF ERHWGVFNYDGSRKYNLRLAGGRSIAPARGVRYLSRQWCVLRPDASPADPAIGGAVGY ACQYADCTSLGAGSSCGGLDARGNVSYAFNQFFQAANQMKGSCNFNNLSMITTSDPSQ GTCRFQIEIDTGRHDLAVASSASAAATSVAAVLLLALLGLVI</aaseq>

Gene Sequence

<dnaseqindica>1..1479#atgggatcgtgcgcgcgggtgcatgcgctggcggtggcgtgggcggtggcggcgctgctgtcccgcgcgacgccggcgggggccctggcggcgaactggggcacccgcgcgctccacccgctccccggcgacgtcaccgtccgcctcctccgcgacaacggcttcgacaaggtcaagctcttcgaggccgacccctcggcgctccgcgcgctcggccacacggggatccaggtcatggtcggcctccccaacgagctcctcgccccggtctcctcctccgtcgccgccgccgagcagtgggtcctccacaacgtctcctcctacatctccaagctcggcgtcgacatccgcgccgtcgccgtcggcaacgagcccttcctcaagtcctacaagggcaagttcgaggccgccacgctgcccgccgtgcagaacgtccaggccgcgctcgtcaaggccgggctcgcccgacaggtgcgcgtcaccgtcccgctcaacgccgacgtctacgagtcgctcgacgggaggccgtcggcgggggacttccggcccgacatcgccggcctcatggtcggcctcgtccgcttcctcctcgacaatggcgggttcctcaccatcaacatctaccccttcctgtcgctccaggccgaccccaacttccccgccgactacgcctacttcccgtcgccggggtcgccgccgtcgcaggccagcgtccaggacggtggcgtgctgtacaccaacgtgttcgacgccaactacgacacgctcatctcggcgctggagaagcacgggctgggcgccatcgccgtcgtggtgggggagatcgggtggccgaccgacggcgacaagagcgccaacgccgccaacgcgcagcgcttcaaccaggggctcttcgaccgcatcctcgccggcaagggcacgccgcggcggccgcagatgcccgacgtctacgtgttcgcgctgctcgacgaggacgccaagagcatcgacccgggcagcttcgagcgccactggggcgtgttcaactacgacggctcgcgcaagtacaacctccgcctcgccggcggccggagcatcgcgccggcgaggggcgtccgctacctgtcgcggcagtggtgcgtgctccggccggacgccagcccggccgacccggcgatcggcggcgccgtcggctacgcgtgccagtacgccgactgcaccagcctcggcgccggctcgtcgtgcggcggcctcgacgcccgcggcaacgtctcgtacgcgttcaatcagttcttccaggcggccaaccagatgaagggctcctgcaacttcaacaacctctccatgatcaccacctccgacccctcccagggcacctgccgcttccagatcgagatcgacaccggccgccacgacctcgccgtcgcctcctccgcatccgccgccgccacgtccgtcgccgccgttctgctcctcgccttgcttggcctcgtcatataa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0397600, RefSeq:Os03g0397600