Os10g0213100

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Revision as of 08:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0213100| Description = Similar to Gamma-aminobutyrate transaminase subunit isozyme 3 (EC 2.6.1.19)| Version = NM_001189143.1 GI:297727416 Ge...")
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Gene Name

Os10g0213100

Description

Similar to Gamma-aminobutyrate transaminase subunit isozyme 3 (EC 2.6.1.19)

Version

NM_001189143.1 GI:297727416 GeneID:9269970

Length

2853 bp

Definition

Oryza sativa Japonica Group Os10g0213100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:7772909..7775761

Sequence Coding Region

7772910..7773317,7774012..7774058,7774792..7774819

Expression

GEO Profiles:Os10g0213100

Genome Context

<gbrowseImage1> name=NC_008403:7772909..7775761 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:7772909..7775761 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atcccaagtcccaaatccatcgaaaccagccgccaccgtccccttcggagagaaaatatcaccgtgtgccgcggctgccgctcgcctccgcctccgccgctggagcgtggctggggtgctgcgtcggcggcggcggcagggccgggtcggcggcgtggtgccacgcgacggcggccggcagcatggcagcggcgttggagctggaggctatccggtgggggaccgccaagctgcagggcgcgggcaagcggcacccaccccttcctctcgcgcgcccatcgagcgcggaagcggcgagctgtcgaggcaccggcgtcactgccggccaagtcgcgccgcgccgcacctcctcccagccgtctagcgacctcaagaaatgctccatggtctgaattcataggttctgaggtgatggtgagagcagatgagaatggtgaagacatgtgctggcttagattgctgctttcattgctgaacctgtga</cdnaseq>

Protein Sequence

<aaseq>IPSPKSIETSRHRPLRRENITVCRGCRSPPPPPLERGWGAASAA AAGPGRRRGATRRRPAAWQRRWSWRLSGGGPPSCRARASGTHPFLSRAHRARKRRAVE APASLPAKSRRAAPPPSRLATSRNAPWSEFIGSEVMVRADENGEDMCWLRLLLSLLNL </aaseq>

Gene Sequence

<dnaseqindica>2..409#1104..1150#1884..1911#gatcccaagtcccaaatccatcgaaaccagccgccaccgtccccttcggagagaaaatatcaccgtgtgccgcggctgccgctcgcctccgcctccgccgctggagcgtggctggggtgctgcgtcggcggcggcggcagggccgggtcggcggcgtggtgccacgcgacggcggccggcagcatggcagcggcgttggagctggaggctatccggtgggggaccgccaagctgcagggcgcgggcaagcggcacccaccccttcctctcgcgcgcccatcgagcgcggaagcggcgagctgtcgaggcaccggcgtcactgccggccaagtcgcgccgcgccgcacctcctcccagccgtctagcgacctcaagaaatgctccatggtctgaattcataggttctgaggtaattcaagaaatgctctatggtctgaattcataggtttttttggctggaatctcgtacagttcctttcatcacctcccccaaagttttagcatgcaatgtttcttcttcttttttctctcttgctctgtttggttcttcctttcccttttccttttgtttctccacttgtgaataacctttcatttctttacattcagtagtactctagtagaaatgttcctctgtttcttctccgttactgttgatcatgttcgtttgctgtttgtgggttgtggcaccaagaaatggatggttgaatgagagagggtgggtgttggtgtgctcctgcattttattggaagcagcagcttccagatctgagatggcagaggcattttgctgctcatggtttgagttccatttcgagttaattcattccttctttccttcagtttcttggtttataatctgtattatatatatgtatgtagttgtgcttacatgccattgcctactataagatccatatattatatatatgtatgtagttgtgcttacatgccattgcctactataagatcctgtattatatatgtttaagatccatgctgcatttgatttggtttagttctacacgttcgttctcttctctccaattctcaacttatgctttgtaggctgatctgaccatgttgactgtctacttcaataggtgatggtgagagcagatgagaatggtgaagacatgtgctggcttaggtgagacatgtgcaattcattcttcaatccaaaacttcctgtgttgttttttcttaatcctggtcacatgaacatatagcatttttatctcatcatgctatgcatatgcccaatcgtttgctatgcctatgctctaattcaggttgcatttttgctttgtctactacctgaattctttttttcatctactaactcaaccgatcgattttgctatatcaattcacaaattttgctgtaccaaactctcacagctttaatatgcctaagctaatttattccaggttcaattagtttcttttatgcgtgttagtgcttagacttccatttgcagaaacttatagttaattagtgctacttttgtatggttgtggtggtagatagtgtatacatggatgtattttctgtaagtgtgatagagctaagctacatctgttcaagataaagaacaaaatgtgatataagtaaggcaattctaatagaatcttctatcggaaagacatgcaaacctacttaaaagataaactggagtatttatgattgtgcaacattgtctttgtgtaatgataaataggttcaggtagttgagttcttggttgatttcagttgttatttcccctgaaaagtgggagttctcctaaatctggagaatcttattctgatgccatcagaaaagaccatatcctatattttgctgaataatctctgatgcattccgtatcccttttattttcagattgctgctttcattgctgaacctgtgatgggtgctggcggtgttatcgctcctccaaagacatactttgagaaggtaaccagaataacatgttagatttttctttccatgatccttaggaaagagaaactgccttctagaaatatttgaccccacagtccatataacattgatgcattttcttaattcaagaaatgtttattgcctgttcactgttgaacatattacatccatcatatccttttattagtttgtagtatttgacagatttttagtttactactgaaaagaagttatttattctatttccttaggattatattatttccatcaaacttggatgtaaactaggattcttcactcttctgtgtttatcatttccaggtcagcccatacactattctgggcatgtataaaaaatgcattgatatattatagttagaatttagttaccatactatctccaagaataacctataagttcaaacgtagttacttgtttatatctcttttgctaaagtgtcgatgtaaatatcctgaagcaacgctcggggtaccatctagttttatggataagaaaactttacaatgattgcttgttgtatataacccattaactatgtatacaaaaaatctttcatactgtgatggcatgttttgtttacaattttttgtcttgtatttataaattgtttacatgtaatttcagaggtaaggtttgtcaatcctcctcatgtcgccttgatgattcatgatgagacggcagtggattttggttagtgtgatttcgacacttggttttgcgtttggtaagtgaacctgagattgtatttggacttggttgggttggcgcatatgtattttgacttgtgattatgtgttaaagtcaataactggctggttttggtcagagtgatatactgatgtactgaacctgattatgtgccgatgtattttgttttggctagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0213100, RefSeq:Os10g0213100