Os03g0401300

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Revision as of 12:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0401300| Description = Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2)| Version = NM_001056854.1 GI:115453436 GeneID:43...")
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Gene Name

Os03g0401300

Description

Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase 2)

Version

NM_001056854.1 GI:115453436 GeneID:4333062

Length

4811 bp

Definition

Oryza sativa Japonica Group Os03g0401300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16852236..16857046

Sequence Coding Region

16852660..16852846,16852941..16853185,16853284..16853602,16853689..16853913,16854018..16854184
,16854268..16854384,16854472..16854645,16854727..16854822,16854907..16855123
,16855243..16855361,16855487..16855679,16855800..16855951,16856047..16856176
,16856905..16857014

Expression

GEO Profiles:Os03g0401300

Genome Context

<gbrowseImage1> name=NC_008396:16852236..16857046 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16852236..16857046 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggaagctgccggcgaccgcgtcctgagccgcctccacagcgtcagggagcgcatcggcgactccctctccgcccaccccaatgagctcgtcgccgtcttcaccaggctggttaacctcggaaagggaatgcttcaggcccaccagatcattgctgagtacaacaacgcaatctctgaggctgatcgtgagaagctgaaggacggtgcttttgaggatgtcctgaggagtgcacaggaggggattgttatctccccatgggttgcccttgccatccgcccgaggcccggtgtctgggagtatgtgagggtcaatgtgagcgagctcgctgttgagttgctgacagtccccgagtacttgcagttcaaggaacagcttgtggaagaaggcaccaacaacaactttgtgcttgagctggatttcgagccattcaatgcctccttccctcgtccttctctgtcgaagtccattggcaatggtgtgcagttcctcaacaggcatctgtcatcgaagctcttccatgacaaggagagcatgtacccactgctcaacttccttcgtgcacacaactacaagggcatgaccatgatgttgaatgacagaatccgcagtctcagtgctctccaaggtgctctgaggaaggctgaggagcatctttctggtctttcagcagacaccccttactcagaattccaccacaggttccaggaacttggtctggagaagggttggggtgactgtgccaagcgttcccaggagaccattcacctccttttggaccttcttgaggcccctgatccgtccaccctcgagaagttccttggaacaatcccaatggtgttcaatgttgtcattatgtccccacacggttacttcgcgcaagccaatgtcttgggttaccctgacactggagggcaggttgtctacattttggaccaagtccgtgctatggagaatgagatgcttctgaggatcaagcagcaaggtctcaatattacaccacgcatccttattgtcaccaggttgctccctgatgcaactggcaccacctgcggtcagcgtcttgagaaggtccttggcaccgagcacacccacatcctacgtgtgcctttcagaactgaaaatggaattgttcgcaagtggatctcacgttttgaagtctggccgtacctggaaacattcactgatgatgtcgcgcacgaaattgctggagagctccaggccaatcctgacttgatcatcggaaactacagtgacggaaaccttgttgcatgcttgcttgcacacaagatgggtgttacccattgtaccattgcccatgcgcttgagaaaaccaagtaccccaactctgacctctactggaagaagtttgaggatcactaccacttctcatgccagttcacaactgacttgattgcgatgaaccacgctgacttcatcatcaccagtaccttccaagagattgccggaaacaaggacactgttggtcagtatgagtctcacatggcattcaccatgcctggtctgtaccgtgttgtccacggtattgatgtttttgacccgaagtttaacattgtctcgcctggtgcggacatgtccatctacttcccttactctgagtctcgtaagaggctcacctccctccacccagagattgaggagttgctctacagcgaagttgacaacaacgagcacaagtttatgctgaaggacaggaacaagccaatcatcttctccatggctcgtcttgaccgtgtcaagaacttgactggtctggttgagctgtatggtcgcaaccctcgcctgcaagagctggttaaccttgtggttgtctgtggtgaccatggcaacccatctaaggacaaggaggagcaggctgagttcaagaagatgtttgaccttattgagcaatacaacttgaatggccacatccgctggatctccgcgcagatgaaccgtgtccgcaacggtgagctctaccgttacatctgcgacaccaagggtgcttttgtgcagcccgctttctacgaggcattcggtctcactgttgttgagtccatgacctgtggtctcccgacattcgcaaccgcctatggtggtccagctgagatcatcgtgaacggagtgtctggcttccacattgacccataccagggtgacaaggcctcggcgctgctcgttgagttctttgagaagtgccaggaagaccccagccactggaccaagatctcgcagggcggtcttcagcgtatcgaggagaaatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacggattctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatgctgtatgccctcaagtaccgcaccatggctagcaccgtcccgttggccgtcgagggcgagccgtcgaacaagtga</cdnaseq>

Protein Sequence

<aaseq>MGEAAGDRVLSRLHSVRERIGDSLSAHPNELVAVFTRLVNLGKG MLQAHQIIAEYNNAISEADREKLKDGAFEDVLRSAQEGIVISPWVALAIRPRPGVWEY VRVNVSELAVELLTVPEYLQFKEQLVEEGTNNNFVLELDFEPFNASFPRPSLSKSIGN GVQFLNRHLSSKLFHDKESMYPLLNFLRAHNYKGMTMMLNDRIRSLSALQGALRKAEE HLSGLSADTPYSEFHHRFQELGLEKGWGDCAKRSQETIHLLLDLLEAPDPSTLEKFLG TIPMVFNVVIMSPHGYFAQANVLGYPDTGGQVVYILDQVRAMENEMLLRIKQQGLNIT PRILIVTRLLPDATGTTCGQRLEKVLGTEHTHILRVPFRTENGIVRKWISRFEVWPYL ETFTDDVAHEIAGELQANPDLIIGNYSDGNLVACLLAHKMGVTHCTIAHALEKTKYPN SDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQEIAGNKDTVGQYESHMAFTMP GLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSESRKRLTSLHPEIEELLYSEVDNNEH KFMLKDRNKPIIFSMARLDRVKNLTGLVELYGRNPRLQELVNLVVVCGDHGNPSKDKE EQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAFGL TVVESMTCGLPTFATAYGGPAEIIVNGVSGFHIDPYQGDKASALLVEFFEKCQEDPSH WTKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKY RTMASTVPLAVEGEPSNK</aaseq>

Gene Sequence

<dnaseqindica>4201..4387#3862..4106#3445..3763#3134..3358#2863..3029#2663..2779#2402..2575#2225..2320#1924..2140#1686..1804#1368..1560#1096..1247#871..1000#33..142#aggcttgaggagccaagaggaagaggagagcaatgggggaagctgccggcgaccgcgtcctgagccgcctccacagcgtcagggagcgcatcggcgactccctctccgcccaccccaatgagctcgtcgccgtcttcaccaggttcgtgctgatttagtgatttcccagcattagattttgttggtttctagtctactgccttcagatgttactgtattttcttttagaaggagatgttcatataggatctttgttgttgagattgttagatctggccaggaatggctcatatttactgaattggatgcaatcattttgtagtcactttttttttaagtttctgattagaatgaatatttaagtgcggccttctgcagccaagattttgtacaaacctagtactactgaataatgatgaaatatacaaatgtagttttggattactgtggactggtagtgctagatctgactgcatgtgcatgttatttatattatatatacggtttacaaactgaatacaagtaatgaattctgcactggtacagatgcttgttgtggtagcaaagtttcacaaaaaaaataaaaaacctacatcttactagatctattggcgcgagcgcgtagatctgattatcgcgcatatttcattaagtccaattaaatggtcaaaactaatcatttcatatctacaatgaaatttttaattcatctcaatgcaaacagatcatatatggtctttttaagtggctaatagcaaattttcttattatgcgcaaatgctcaagtgctaaaattatcttattgagatatttataggctgagttgatagatctggcctgatatttttgttgacactgttatttgcgcaggctggttaacctcggaaagggaatgcttcaggcccaccagatcattgctgagtacaacaacgcaatctctgaggctgatcgtgagaagctgaaggacggtgcttttgaggatgtcctgaggagtgcacaggtttgaatcagattcagatttcattgcatcacagagatccatctttactctaccgcttgctctaacttaacttgtaattgttttttatcatgcaggaggggattgttatctccccatgggttgcccttgccatccgcccgaggcccggtgtctgggagtatgtgagggtcaatgtgagcgagctcgctgttgagttgctgacagtccccgagtacttgcagttcaaggaacagcttgtggaagaagggtatgaaatctgcataattgggatactaaaaacatatattcttaaaatttaaaacttaattttattatttttcttttatcgatatatatgtcattgtaatatctctgatgtatatttcagcaccaacaacaactttgtgcttgagctggatttcgagccattcaatgcctccttccctcgtccttctctgtcgaagtccattggcaatggtgtgcagttcctcaacaggcatctgtcatcgaagctcttccatgacaaggagagcatgtacccactgctcaacttccttcgtgcacacaactacaagggcatggtaaggcagcttcatactatttcctcatctcacatttttgtactatggcatattaacatgaattgaattgattttgagatggaagtataaattctgaatggatggaatatatattttttctgcagaccatgatgttgaatgacagaatccgcagtctcagtgctctccaaggtgctctgaggaaggctgaggagcatctttctggtctttcagcagacaccccttactcagaattccaccacaggtactgataattattttttacatattatgaactctagaatgtattttgatatgaaaccaccgaagatattttgccagtattgttgtgactaaaaatgaccatttgattggaaaatacaggttccaggaacttggtctggagaagggttggggtgactgtgccaagcgttcccaggagaccattcacctccttttggaccttcttgaggcccctgatccgtccaccctcgagaagttccttggaacaatcccaatggtgttcaatgttgtcattatgtccccacacggttacttcgcgcaagccaatgtcttgggttaccctgacactggagggcaggtagaattcttaattttgacatttgttcatacttaaaaaaattaaacctgttctcattattctttgtgctatgattaccgaaaggttgtctacattttggaccaagtccgtgctatggagaatgagatgcttctgaggatcaagcagcaaggtctcaatattacaccacgcatccttattgtaagtgggatacctgatatggtgcaatacaacttgtcagctatagcaatatgatatttaaccttctttggtcttgaacaggtcaccaggttgctccctgatgcaactggcaccacctgcggtcagcgtcttgagaaggtccttggcaccgagcacacccacatcctacgtgtgcctttcagaactgaaaatggaattgttcgcaagtggatctcacgttttgaagtctggccgtacctggaaacattcactgatgtagatacctaacctcgctgtcacaccttcttggttattcatttattaaagataaacttcatattgactctttcccatggatgtcaggatgtcgcgcacgaaattgctggagagctccaggccaatcctgacttgatcatcggaaactacagtgacggaaaccttgttgcatgcttgcttgcacacaagatgggtgttacccatgtacgcattttgactactctgatcagaagtgttttaactacatatttgctcattctcatgttgccttgttccatgatatgcagtgtaccattgcccatgcgcttgagaaaaccaagtaccccaactctgacctctactggaagaagtttgaggatcactaccacttctcatgccagttcacaactgacttgattgcgatgaaccacgctgacttcatcatcaccagtaccttccaagagattgccggaaagtaatatttctatacaactaaagttttctgggtcacatccgtcagttatgtcgtaaaaatgcaattacctttccatgatctaatggcattttctggtttttcagcaaggacactgttggtcagtatgagtctcacatggcattcaccatgcctggtctgtaccgtgttgtccacggtattgatgtttttgacccgaagtttaacattgtctcgcctggtgcggacatgtccatctacttcccttactctgagtctcgtaagaggctcacctccctccacccagagattgaggagttgctctacagcgaagttgacaacaacgagcacaagtaagaagcggtttttacatagctcgatctacattcatctgatgcatgtcgccctcattatctgactagaatactctctgcaacaggtttatgctgaaggacaggaacaagccaatcatcttctccatggctcgtcttgaccgtgtcaagaacttgactggtctggttgagctgtatggtcgcaaccctcgcctgcaagagctggttaaccttgtggttgtctgtggtgaccatggcaacccatctaaggacaaggaggagcaggctgagttcaagaagatgtttgaccttattgagcaatacaacttgaatggccacatccgctggatctccgcgcagatgaaccgtgtccgcaacggtgagctctaccgttacatctgcgacaccaagggtgcttttgtgcaggtaacttaatgatgttctctcattgcaaaaatatcatggttgaatacttgaattgtaaatctaactgttctcaaatttatcttgtcttgcgtttccagcccgctttctacgaggcattcggtctcactgttgttgagtccatgacctgtggtctcccgacattcgcaaccgcctatggtggtccagctgagatcatcgtgaacggagtgtctggcttccacattgacccataccagggtgacaaggcctcggcgctgctcgttgagttctttgagaagtgccaggaagaccccagccactggaccaagatctcgcagggcggtcttcagcgtatcgaggagaagtatgcaaaacacatcccagtaatctgtgtttctgaatacgcatttcgtctttcttgcagtgctaacattatgtttctccaacctttgtttcagatacacctggaagctctactctgagaggctgatgaccctcaccggcgtctacggattctggaagtacgtctcgaacctggagaggcgtgaaacccgccgctaccttgagatgctgtatgccctcaagtaccgcaccatggctagcaccgtcccgttggccgtcgagggcgagccgtcgaacaagtgagctggccaacatctcaggctgagactctgaaagaggagagcattggagtttctttgctttgtttccattctctggtttcagagatgaaaagagaagagagatatttcaggatgctttgcattcctaggcactgctctttttccttaagaaagtaaggtcgattgaatttgggagttttctagtttgatttagttgggggtgagttcagtggaatgtggtgtgtggttggtgctctgtctcctcttgttattgggatgttacctatgaataatagaaacggccttggtgccgtttctgcaataatatattgtagcatccttgtttccaagaaaaaattgtcactgaaatgctcacttctccttggggttatcttactgtttatttatgtttcaccaatcgaaatccttactgtgcatctttgact</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0401300, RefSeq:Os03g0401300