Os03g0402000

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Revision as of 12:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0402000| Description = Similar to Trafficking protein particle complex subunit 3| Version = NM_001056856.1 GI:115453440 GeneID:4333064| Len...")
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Gene Name

Os03g0402000

Description

Similar to Trafficking protein particle complex subunit 3

Version

NM_001056856.1 GI:115453440 GeneID:4333064

Length

2796 bp

Definition

Oryza sativa Japonica Group Os03g0402000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16910443..16913238

Sequence Coding Region

16910772..16910894,16911217..16911399,16911574..16911673,16912865..16912962,16913079..16913138

Expression

GEO Profiles:Os03g0402000

Genome Context

<gbrowseImage1> name=NC_008396:16910443..16913238 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16910443..16913238 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgctcacggggcccaagtccggggacgccctcttcggcagcgtcgagcgcgtcaacgcggagctgttcacgctcacgtacggggccatcgtcaggcagctgctcacggatctggaggaggtcgaggaggtcaacaagcagcttgatcagatgggctacaacattggaactcggttggttgacgagttcttggccaaatcaaatgtatcaaggtgtgttgacttcaaggagactgccgatgtcatcgcaaagcttggattcaaaatgttcttgggtgtgactgcaactgtcaccaattgggatgctgagggtacaagctgcagctttgtattggaggacaatcctcttgtagactttgttgaacttcctgatacttgccaaggtcttcagtactgcaatgtgctaagtggagttattaggggtgcactggaaatggtgtccatgaagaccgaggttacatgggtccgtgatatgcttcgtggggatgatgcctacgagatgcgagtgaagcttaccaagcaagtcccagaggaatacccctacaaggatgatgactga</cdnaseq>

Protein Sequence

<aaseq>MPPLTGPKSGDALFGSVERVNAELFTLTYGAIVRQLLTDLEEVE EVNKQLDQMGYNIGTRLVDEFLAKSNVSRCVDFKETADVIAKLGFKMFLGVTATVTNW DAEGTSCSFVLEDNPLVDFVELPDTCQGLQYCNVLSGVIRGALEMVSMKTEVTWVRDM LRGDDAYEMRVKLTKQVPEEYPYKDDD</aaseq>

Gene Sequence

<dnaseqindica>2345..2467#1840..2022#1566..1665#277..374#101..160#ctccgatctctctctctcacacacccgcctcaccctcaccgccaccgccaccgacgagctccggtcgccgccggcgagaggcgccgcgcgatcccgggagatgccgccgctcacggggcccaagtccggggacgccctcttcggcagcgtcgagcgcgtcgtaagatcccgcccccccaccacgtttgctccgcagcaagtcagaaacctccccctggatctacccggccgcccgccctgatctgcttcgttttggctttctccttttgctcgcagaacgcggagctgttcacgctcacgtacggggccatcgtcaggcagctgctcacggatctggaggaggtcgaggaggtcaacaagcagcttgatcagatgtatgtgtgtgtggttctcctcttcctcggtgtctaattttcttgttccatttagggtaggaatcgagacggcgatcgtgttatgggagtaggaattcggaaatattcacttcttgcaacccacaaattacagtgaagcagctacaatggcctcagtaaggcaaaattggttatataacatcgaagttcacgtttttggttttatagcaccaaagatgccggttcactttaatagcacccaaagttcaccctgttcccatttttaacacttccgtcaattctcgatcgttttccgttcgctttgatcgctattgacccagccacgcacgcgatgtgagtgacatttctacccctcacaagtacaagtagaatgcatggcaatgaggggtagaaacgtcatatcacgtgcgtgggtgggccaatagcgatcaaggcgaacggaaaacgatcgaaagttgacggaagtgttaaaaatgggaacgggtgaactttgggtgctattaaagtgaaccggcatctttcggtgctataaaaccaaaaacgtgaactttcgatgctatataaccaattttgctgaggattctatgtagactttgctgtggaattttgagcaaactaacgaacgtttaggtagtctgaatgatccaagtattcgtaaaggtgacctttagtaaagttcttcttgaaggtgtattacaacgattagggatttagaagctcaaccttatgcctggattatctgattttccaatttagtgcagactttacaccgcaaccaaatggtgattgatcattttgatatggcatttcacggcgccttatattcacaacaccttcatggtgtcatggtccaatgggggtgggggtggggggaataatatgtacaaacatatcctattatattccagttttagaatttctttacttcattaaacactagtggggttagagtgccacaacaattagtatatgtccatgtatagggatgatattaactgaatcttgactttgaagtaggaaaatatatcaagtgattatctggcgaatattgggattcttatttagtagagctaatcagtatctatggcttgctggctgcattttttttttcataatttactactaccttcttccattgtcttttcgctctttcctaaataagtcgctgctatatttattttcactttgcaggggctacaacattggaactcggttggttgacgagttcttggccaaatcaaatgtatcaaggtgtgttgacttcaaggagactgccgatgtcatcgcaaaggtattttcgttaaacttgttattatatggttcagattgaataggaacattatcgctcgagaacattattacatgtttccagagcttattgtccttattcagatatcccggacttgatggtgcattaagatataggtatatgatctaaaagttttatttctcctttttaaaacagcttggattcaaaatgttcttgggtgtgactgcaactgtcaccaattgggatgctgagggtacaagctgcagctttgtattggaggacaatcctcttgtagactttgttgaacttcctgatacttgccaaggtcttcagtactgcaatgtgctaagtggagttattaggggtgcactggaaatggtttgtttttcagcttccgctaccttctccttccctcttcatgttgaacgatctatggatgcatgacaggaagttgtcgttttcatcaaaattctcatggtcttgttgtacatatttaagttagttcataatgactagatgactgttaaggtgccatcagcaaccaacctgctctattatgtggggttatgccctactatttctcaccataatagcataacggaatttcctttatcagcacatgatatttttatactttgtttatcagtcaagagaaatcttttacaagtgctactctgattgaattgcaattgtcatataggtgtccatgaagaccgaggttacatgggtccgtgatatgcttcgtggggatgatgcctacgagatgcgagtgaagcttaccaagcaagtcccagaggaatacccctacaaggatgatgactgacttgacaatttcgtggatagtttctcagttctcacatgctgcctgtttgttcgtctggatttcccttcttttctttcctatgtgactctggttctggatcgacttggctggacgctacatgagatagctgtgcattatattctacacttgaccttttcacggcagcatcaagtaggtatggaattaattcacttcattgtccttaagattttaacatgctgatcaagtatgttatccgcacgctaccatcagcaacatggatatgccatgtggtcatttgtgaggtttggctccgagcgggcacggaattaattcacttcaatcacctt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0402000, RefSeq:Os03g0402000