Os03g0403400

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Revision as of 12:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0403400| Description = TolB, C-terminal domain containing protein| Version = NM_001056859.1 GI:115453446 GeneID:4333067| Length = 2357 bp| ...")
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Gene Name

Os03g0403400

Description

TolB, C-terminal domain containing protein

Version

NM_001056859.1 GI:115453446 GeneID:4333067

Length

2357 bp

Definition

Oryza sativa Japonica Group Os03g0403400, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17085367..17087723

Sequence Coding Region

17085426..17087660

Expression

GEO Profiles:Os03g0403400

Genome Context

<gbrowseImage1> name=NC_008396:17085367..17087723 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:17085367..17087723 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggagagagccgcggcagcatcgccttcttcgccacctaccgcccgccggtgccgctcgacgtcttctcctgcccggttgcgccgccgccgtcctccccgcgagacgagctccacctcaccgatggcgtctcctacaaccacagctgccgccccatcccggccgccgcgctcagggcgctcctccagcgccccaagctggcctccgaggccaccaccgccgacgtcgacgccggccgcatcaccggcctggtgttcgtctccgagagggacagcgggctggagacgctgcacgtagccctgcgcttcgatggcggcaagcaggtgaaggtgttcggcctggccgacatcttcggcgccggcggcgacttcagcggcgtccgcatggaggacagcggctgcttcggcggcggctacagggagcgcggccgcgccgtggaccacacgctggtgtacgtgtccaccagggagccggtggcggctcgccggagcccatggacggtggtgtacggcaccaacctgaggaccggcgagacggcccgcctcaccccgagggggaccttcgacctgagccccgccgtgtcgccgtcggggaagagggtggcggtggcgtcgtggcagggcaagcccggcctgtgggacggcgagatcgaggacctgaggacggacatctacgtgatgaacgtgcacaagccgccgctggggcggacgggcccggtggtcaagaacgccgggtggccgacgtggggcagcgacgacgtcatcttcttccaccgccgggtcggcaccacctggggcgtgttccgcttctccatgagcaccggggaggaggcgcgcgtgacgcccgaggagttcgacgccgtgacgccggcggccatcagcgagacgaaggtcgcggtggccaccatccgcaggaagtcccagttcagcgacgtccgcgtggaggagcagtaccggcacatcgagatcttcgacgtggcctcgccggagcagccggtgaagatcacgcagaagactaggcccaagaccgaccacttcaaccccttcgtcctcgacggcggcagccgcatcgggtaccaccggtgcaagagcgagcagcttcaccagaataacggtggaggcggcagcagtgtagccaacaacttccacaagctgcagtcgccgcacaaggacgtggggttgttcagggtgtccggcgtgtgcccgaccatctccaaggacggctccaagctcgcgttcgtggacaacgagttcaaggcggtgtggctcgccgacagccatggcctgcgcgtggtgtacgagaagaaggggcccaacagcgtgttctccacggcgtggaaccagaacacggcgctcgacacgctctacgtctgcgtcggcccctccttcagcgccgacaagccgctccagatctacgccatccacgacgtgtccgcgctcggcggccgccagcagcgccgcctcaccgccggcgcctccaacaacgccttcccctcgagcagccccgacggtggcaggctcgtgttccgctccacccgcgacggcggcggcggcggcaggcggcacaagaacctgtacgtcatggaggacgccgccgtcggcgagttcggcaccagcaaggtgacgcgcctcaccagcggcgcgtggacggacacccactgcagctggtcgccgcgtgaggggagcgactggatcgtcttctcctccacccgagacaagcccgccgccgcgccagccgacgacaacggcctcgacccgggctacttcgccgtgttcctcgtccgcgcctccgaccccacggtggtggtcagggtggtgaggagcgccgacagcgtcgccggccacgtcaaccacccggtgttcagccccgacggccgcagcatcgccgtcaccgccgacctcgccgcggtgtccgccgacccgatctcgctgccgctgttcctgcactccgtccgcccctacggcgacatcttcaccgtggacatcgaccccgacgacatcagcaagaacagggacgtcagggcgttccaccgcgtgacgcacagccgctacgagaactccacgccggcgtggaccacgttcgccaccgacgaccccaacgcgcagtggagcacgctggtgaccaccaaggaggcggcggcttaccgtccggcctgcccctacgcccaccccgacggcggcgacagctggcacatgaccggccacctcctcctccccaagagatgctgctag</cdnaseq>

Protein Sequence

<aaseq>MAGESRGSIAFFATYRPPVPLDVFSCPVAPPPSSPRDELHLTDG VSYNHSCRPIPAAALRALLQRPKLASEATTADVDAGRITGLVFVSERDSGLETLHVAL RFDGGKQVKVFGLADIFGAGGDFSGVRMEDSGCFGGGYRERGRAVDHTLVYVSTREPV AARRSPWTVVYGTNLRTGETARLTPRGTFDLSPAVSPSGKRVAVASWQGKPGLWDGEI EDLRTDIYVMNVHKPPLGRTGPVVKNAGWPTWGSDDVIFFHRRVGTTWGVFRFSMSTG EEARVTPEEFDAVTPAAISETKVAVATIRRKSQFSDVRVEEQYRHIEIFDVASPEQPV KITQKTRPKTDHFNPFVLDGGSRIGYHRCKSEQLHQNNGGGGSSVANNFHKLQSPHKD VGLFRVSGVCPTISKDGSKLAFVDNEFKAVWLADSHGLRVVYEKKGPNSVFSTAWNQN TALDTLYVCVGPSFSADKPLQIYAIHDVSALGGRQQRRLTAGASNNAFPSSSPDGGRL VFRSTRDGGGGGRRHKNLYVMEDAAVGEFGTSKVTRLTSGAWTDTHCSWSPREGSDWI VFSSTRDKPAAAPADDNGLDPGYFAVFLVRASDPTVVVRVVRSADSVAGHVNHPVFSP DGRSIAVTADLAAVSADPISLPLFLHSVRPYGDIFTVDIDPDDISKNRDVRAFHRVTH SRYENSTPAWTTFATDDPNAQWSTLVTTKEAAAYRPACPYAHPDGGDSWHMTGHLLLP KRCC</aaseq>

Gene Sequence

<dnaseqindica>60..2294#ccagcagatcgagtcgatatcgattcatcgcaaaacaaagctagagagagcgacgatcaatggcgggagagagccgcggcagcatcgccttcttcgccacctaccgcccgccggtgccgctcgacgtcttctcctgcccggttgcgccgccgccgtcctccccgcgagacgagctccacctcaccgatggcgtctcctacaaccacagctgccgccccatcccggccgccgcgctcagggcgctcctccagcgccccaagctggcctccgaggccaccaccgccgacgtcgacgccggccgcatcaccggcctggtgttcgtctccgagagggacagcgggctggagacgctgcacgtagccctgcgcttcgatggcggcaagcaggtgaaggtgttcggcctggccgacatcttcggcgccggcggcgacttcagcggcgtccgcatggaggacagcggctgcttcggcggcggctacagggagcgcggccgcgccgtggaccacacgctggtgtacgtgtccaccagggagccggtggcggctcgccggagcccatggacggtggtgtacggcaccaacctgaggaccggcgagacggcccgcctcaccccgagggggaccttcgacctgagccccgccgtgtcgccgtcggggaagagggtggcggtggcgtcgtggcagggcaagcccggcctgtgggacggcgagatcgaggacctgaggacggacatctacgtgatgaacgtgcacaagccgccgctggggcggacgggcccggtggtcaagaacgccgggtggccgacgtggggcagcgacgacgtcatcttcttccaccgccgggtcggcaccacctggggcgtgttccgcttctccatgagcaccggggaggaggcgcgcgtgacgcccgaggagttcgacgccgtgacgccggcggccatcagcgagacgaaggtcgcggtggccaccatccgcaggaagtcccagttcagcgacgtccgcgtggaggagcagtaccggcacatcgagatcttcgacgtggcctcgccggagcagccggtgaagatcacgcagaagactaggcccaagaccgaccacttcaaccccttcgtcctcgacggcggcagccgcatcgggtaccaccggtgcaagagcgagcagcttcaccagaataacggtggaggcggcagcagtgtagccaacaacttccacaagctgcagtcgccgcacaaggacgtggggttgttcagggtgtccggcgtgtgcccgaccatctccaaggacggctccaagctcgcgttcgtggacaacgagttcaaggcggtgtggctcgccgacagccatggcctgcgcgtggtgtacgagaagaaggggcccaacagcgtgttctccacggcgtggaaccagaacacggcgctcgacacgctctacgtctgcgtcggcccctccttcagcgccgacaagccgctccagatctacgccatccacgacgtgtccgcgctcggcggccgccagcagcgccgcctcaccgccggcgcctccaacaacgccttcccctcgagcagccccgacggtggcaggctcgtgttccgctccacccgcgacggcggcggcggcggcaggcggcacaagaacctgtacgtcatggaggacgccgccgtcggcgagttcggcaccagcaaggtgacgcgcctcaccagcggcgcgtggacggacacccactgcagctggtcgccgcgtgaggggagcgactggatcgtcttctcctccacccgagacaagcccgccgccgcgccagccgacgacaacggcctcgacccgggctacttcgccgtgttcctcgtccgcgcctccgaccccacggtggtggtcagggtggtgaggagcgccgacagcgtcgccggccacgtcaaccacccggtgttcagccccgacggccgcagcatcgccgtcaccgccgacctcgccgcggtgtccgccgacccgatctcgctgccgctgttcctgcactccgtccgcccctacggcgacatcttcaccgtggacatcgaccccgacgacatcagcaagaacagggacgtcagggcgttccaccgcgtgacgcacagccgctacgagaactccacgccggcgtggaccacgttcgccaccgacgaccccaacgcgcagtggagcacgctggtgaccaccaaggaggcggcggcttaccgtccggcctgcccctacgcccaccccgacggcggcgacagctggcacatgaccggccacctcctcctccccaagagatgctgctagctagctaattaagcaatgcctaattatccagccataattaatgagaaatttgaaattccctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0403400, RefSeq:Os03g0403400

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os03g0403400&oldid=19441"