Os03g0405900

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Revision as of 12:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0405900| Description = Thioredoxin-like domain containing protein| Version = NM_001056866.2 GI:297601067 GeneID:4333077| Length = 3506 bp| ...")
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Gene Name

Os03g0405900

Description

Thioredoxin-like domain containing protein

Version

NM_001056866.2 GI:297601067 GeneID:4333077

Length

3506 bp

Definition

Oryza sativa Japonica Group Os03g0405900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17264509..17268014

Sequence Coding Region

17265892..17266461,17267089..17267760

Expression

GEO Profiles:Os03g0405900

Genome Context

<gbrowseImage1> name=NC_008396:17264509..17268014 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:17264509..17268014 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacagttctttattgtcttttacatgattttgcagatccagacattcttagctgttttcttcttgttgatggtacccaggtgcccatctctgacctcgaaggcaagtatgttggtttgtgctttgtggtgaatggctatggtccagttgttcaattcacctcagtgcttgccaaaatatatgaaaaacttaaagcagttggggagaagtttgaagttgtaatggtatcattggacggtgatgaggaatcattcaatgagagttttgcagacatgccttggcttgccattcctcagggagataagatgtgtgagaagctggctcgttattttgagctcagtggccttcctatgcttgtcctgattggtcctgatgggaagacactgaatgacgatattgctgacataattgatgagcatggtccagatgcatgggaaggttttcctttcagtgcagagaagctcgaaattcttgctgagaaggcaaaagctaaagcagaatcacagaccctggagtcccttctggtcactggtgatttggactttgtccttgggaaagatggggcaaaggttcctgtatcagaacttgttgggaagactgtcctcctctacttttcagctaaatggtgccctccatgccgagccttcctgcctaaacttgtaaacgaatacaacaagatcaaggagaagcacaatgattttgagatcgtatttatttctagcgatcgagagcagagttcctacgatgagttcttctctggcatgccatggcttgctcttcctttgggagacgaaaggaagcaacaattgagtaagatcttcaaaatcactgggatcccttcgcttgtcgccattggtcctgatgggaagacagtgaccaaagatgcgaagaccccactggtggcccatggcgccgacgcttttccattcaccgaggagaagcttcaggagctggagaaggagaaggagaagaagatcaatgacatggcaaaggggtggcctgagaagctaaagcatgatctgcacgatcatgagcttgtgctgactcgctgcaccacgtatggctgcgatggatgcgacgagatgggcgactcatggtcctacaggtgcaaggaatgtgacttcgatctgcatcccaagtgcgcgctggaggagaagggcgatgtggagatgggagaggagaatgctgaggctgcccccgctgggtatgtgtgcgagggagacgtctgcagaaaggtctaa</cdnaseq>

Protein Sequence

<aaseq>MTVLYCLLHDFADPDILSCFLLVDGTQVPISDLEGKYVGLCFVV NGYGPVVQFTSVLAKIYEKLKAVGEKFEVVMVSLDGDEESFNESFADMPWLAIPQGDK MCEKLARYFELSGLPMLVLIGPDGKTLNDDIADIIDEHGPDAWEGFPFSAEKLEILAE KAKAKAESQTLESLLVTGDLDFVLGKDGAKVPVSELVGKTVLLYFSAKWCPPCRAFLP KLVNEYNKIKEKHNDFEIVFISSDREQSSYDEFFSGMPWLALPLGDERKQQLSKIFKI TGIPSLVAIGPDGKTVTKDAKTPLVAHGADAFPFTEEKLQELEKEKEKKINDMAKGWP EKLKHDLHDHELVLTRCTTYGCDGCDEMGDSWSYRCKECDFDLHPKCALEEKGDVEMG EENAEAAPAGYVCEGDVCRKV</aaseq>

Gene Sequence

<dnaseqindica>1384..1953#2581..3252#gaccacaccccgaatccccctccctttgcttttctactcctcaactccgctccactctccacccgggatggcggacgccacgcacgccgccgccgatggcggcgtcgccaccatcctcgcctccgccgacggcagggacttcctcctccgcaactccgccgacaaggtcgaccactccctcttcttttcctcctcccccctctcttttgctcttgcggatttgctttgctttgctactgcgaatctgcgattgtgcgctttctttgtttgatgctcgcccccgatcgaccgtaccgtgcgtgcgtgacgcgtccttgtttcttctcgatcgtgtgtgaatttgtgggggcgactagaagtggtggttgtcagtctgtagtctgtaccgtgctagtgtgatcaggggttttccgtgtccatgtggggtcgattgacgattgattgcgtttgcttgtgtctaagaaatcactaattagtcttcggcataattgcagataacaattaattgaacatgtttacaaaaatttagtactgttagtattatgtccgtatttcctgttcagtccagcaagcatacttagttcaggcttggtgccgtattttcttgtcacaaacagtagagaaatgaagggggagtgagtttgttcttttctttccttttgttgaaaaagacatggtgtgaaatgtatagtagagttcatcaaaaagtgatggaatgtggcaaagttcgattccaccacacatagtactaaacaacttagctctgcctctatgaaaatcgcaaaatatgcgaaaacaatcatgtcttgtgtgaaatcaatatgagtaggactaatttgttctacaccaccaaagtttgtttgctcaaggccttattgtcctgcaggtcaagatcagtagcatcaaggcaagcacagtggccctctacttctcggcctcatggtgcccaccatgcaggcgcttcacgcctaagcttattgaagcatacaatgagctggtctcccagggaaagagctttgaggttgtctttgtttcaggggatagtgatcaagacgcattcaatgcctactttgcaaagatgccttggttggcagtccccttctcagactccgaggctctcgccaagcttaatgaacgctataaggtgatgggtattccacaccttgtaatccttgatgcaaaatctggtgaaatttacactgaagatggagtggagcttgtgcatgagtatggtacagaagcttacccttttacaacagagaggatcaatgaattgaaggaacaggaaaaggcagctaaagataatcaaactattcatagtctgtttggtacacccacccgcgactacttaatcaccaacaagggagacaaggtaactgatcgatgacagttctttattgtcttttacatgattttgcagatccagacattcttagctgttttcttcttgttgatggtacccaggtgcccatctctgacctcgaaggcaagtatgttggtttgtgctttgtggtgaatggctatggtccagttgttcaattcacctcagtgcttgccaaaatatatgaaaaacttaaagcagttggggagaagtttgaagttgtaatggtatcattggacggtgatgaggaatcattcaatgagagttttgcagacatgccttggcttgccattcctcagggagataagatgtgtgagaagctggctcgttattttgagctcagtggccttcctatgcttgtcctgattggtcctgatgggaagacactgaatgacgatattgctgacataattgatgagcatggtccagatgcatgggaaggttttcctttcagtgcagagaagctcgaaattcttgctgagaaggcaaaagctaaagcagaatcacagaccctggagtcccttctggtcactggtgatttggactttgtccttgggaaagatggggcaaaggtatgtttgtagattgttatgcctggtatcattgattaagatctcttttttgcgacttggaaaattgtatcaaagttaatcccgttatgcagtaacttaggtaaattatgcttgttacagacaacattggagtatatttagccgttatgatcaattttaatgagtatgacagcatctgaacttgtcgcttgaagtcattagatatactctttcttgattttagcgttgggacctaaattctgttaattgtaccaaagcacacaaacttttcatatcatgacttcccatgctccataggtaatacggagtactattttttattttttttactgaatgcatgtattgtactgttaatgccttgtaacaaggaaaattaagtccgaaatcctgttcccatcttaatgttcccatagatcgaggatgtaactttacatatgagagaatattatatgctacaatcgtaagtcccggagaatggcaatatgaacggcagtgctccaaaagaaagatgttataatgacttcattgtagattcttgcacattttcgcctacactctgatgtgttatttacctatctgaatgtgtgattagtacatgaagattaacatctgctttttaatgtgaaggttcctgtatcagaacttgttgggaagactgtcctcctctacttttcagctaaatggtgccctccatgccgagccttcctgcctaaacttgtaaacgaatacaacaagatcaaggagaagcacaatgattttgagatcgtatttatttctagcgatcgagagcagagttcctacgatgagttcttctctggcatgccatggcttgctcttcctttgggagacgaaaggaagcaacaattgagtaagatcttcaaaatcactgggatcccttcgcttgtcgccattggtcctgatgggaagacagtgaccaaagatgcgaagaccccactggtggcccatggcgccgacgcttttccattcaccgaggagaagcttcaggagctggagaaggagaaggagaagaagatcaatgacatggcaaaggggtggcctgagaagctaaagcatgatctgcacgatcatgagcttgtgctgactcgctgcaccacgtatggctgcgatggatgcgacgagatgggcgactcatggtcctacaggtgcaaggaatgtgacttcgatctgcatcccaagtgcgcgctggaggagaagggcgatgtggagatgggagaggagaatgctgaggctgcccccgctgggtatgtgtgcgagggagacgtctgcagaaaggtctaaaggagttgttttgtttcccctggcttctttttatctctgtgccggttgaatcgtgcctgaatgtttgggatgtgaatcctatgtgatgagtataataaaacaatcgtctcctggttttgcttataatatgtttgggctggatgatacattggtatttgtggatattaaaatgagctgggtttggattaatgtgtgcaaaatcgtgtgtaattacgattgcggattggtagttgtcttgatctgcttgttattac</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0405900, RefSeq:Os03g0405900