Os03g0406900

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Revision as of 12:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0406900| Description = Protein of unknown function DUF300 family protein| Version = NM_001056869.2 GI:297601069 GeneID:4333080| Length = 38...")
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Gene Name

Os03g0406900

Description

Protein of unknown function DUF300 family protein

Version

NM_001056869.2 GI:297601069 GeneID:4333080

Length

3849 bp

Definition

Oryza sativa Japonica Group Os03g0406900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17328480..17332328

Sequence Coding Region

17330879..17331241

Expression

GEO Profiles:Os03g0406900

Genome Context

<gbrowseImage1> name=NC_008396:17328480..17332328 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:17328480..17332328 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>acatgcaattgctaccgccaatatacatgtaatgacttttttaacgatagtaatggctctttttcgctaaaccaatgcattcatttaacatacagatacccctacattgctgttgtcataaatttcagccagacatgggcactgtattgtctggtgaaattttacaatgcaacacatgaaaagctacaggaaataaggccactagccaagttcataagcttcaaggccatcgtattcgccacttggtggcaaggactgggcattgcaatcatctgccatattgggatcctcccaaaggaaggcaaagttcagaatgcaatacaggatttcctcatttgcattgaggtaatatacttcttgtag</cdnaseq>

Protein Sequence

<aaseq>TCNCYRQYTCNDFFNDSNGSFSLNQCIHLTYRYPYIAVVINFSQ TWALYCLVKFYNATHEKLQEIRPLAKFISFKAIVFATWWQGLGIAIICHIGILPKEGK VQNAIQDFLICIEVIYFL</aaseq>

Gene Sequence

<dnaseqindica>2400..2762#gtgcctcctctcgccatgcccatgcctgcactgctcgcacggcaaggcaggcaggcacagcccgcccgccagcgccagcttcttcgatctcctcctcattcgattcgacgcaacagtcgcactattcagaggagaaaggatccgaggttagcgccttctgtctatctatctcattccacttctgtatctgtatgtactactccagaatccagatgaaatgctagctagtttgcgattagttagttcatcggctcggcctcagagccgccctcgtctagtgattcatttacttagcatgcaatattcattcccaagaattaatggtagcctagctagctttctccgaaatagagagaattatattctgaatcatttttagacacaaggttctgaagaattaaatgtgttgaagctgcttactcgctagaagctgagaatcgcggttgcaaaagatctctattttcagtcgatcagtcattcagtctgtaagcgttatatggcgctgttcttgcggagggtttgattcgatcgatcgatggcacttgatgaggggtcgtccagcttccgggatctgtacaggagcctgcacaccagtgtggtgctcgtcggggcggcgtttgtgctcgtcgccctcctcgtctcgctctggctcatactgcagcatctcagatcatacagcaacccagaggtaacaacatgatatacatcacaaccctgcactttttgggtggccattttagctgtatggatcggaaggaatagaacaatttgtggagtagtttgctgcagttggaccggggcgaagcagttgtttttaagctgttgaaaattggattctgcaggagcagaaatggatcattgctgtcctgtttatggtgcctgtatatgcctctgaatctgtaagttggggggactctctgtttattctcagatttgttgtaggaaggttatctaattgacgcggcatcatgattgattgttctactagatttgcattcagtagtatattgtgttgtggaaatgctaatgcaatcttactgagcttactgactgttcaaggttgctcatgccacggtggtaatagtaccagaatatcatggctgcttaatttggttatcagattttacctgcatataggcatgtagcattctttttttaaaaaccatgtaacatactgacataaattgatatcccatttcagtttccaatttttttcagataatttcgctgtggcattcagagttctccttggcctgtgatatactgaggaattgttatgaagcatttgcgctctatgccttcgggcgttacttggttgcttgtctgggtaatcctacctacttatgaataatatgcaaacatcattgatccatcatcaatctactatagaatttgcactgcatattcataaatgacctccaccaacttgttatgtatatcatacacatccctgtaaacttaagccatggaaatgttgagttctgaacaatttcaggtggagaacggcaagtgtttcgcttgcttgagaacaaaaaaagggaagagctaactgagcagttgctcgagagtcaagataaggcaccagttcgtaaccgaagcagagtccacatcttcttctgggatccaaatgctctgggagagagattgtacacaattataaaattcggtctcgtgcaatatgtaagaacgtgcaaatgttttctcatcctgatattggtcaatagcaaaatgtctcacatcccttctttcacgaaatttcagatgattctcaagtcattatgcgctttcttgtcatccatcttggagctttttggaaaatatggagatggtgaattcaagtggtactatgggtaactctcatacaacttttttgggttatttaaagtagagaaacaagtgaattcaaagaatatagtagatatatgggaaagtgatttcatccatcaagaggatatcccctcgtttcgtgcatgccatctgttatcaaaaaatttaaattttgttggcaagataaattaatatgaaatatattactccacaaacatgcaagttaaaattcaatttctacataacaaaaataacaaatatagatacaaatatacaacaattattttcagtttaatttgttctttttgttgcaacttgtaggagtcaaatttggttttgcgtatttgtggagtgatatatttaatattcatctatgttgtcaattcttttcaattttttttaataactatttagatgacatgcaaacaacgaggggatatcccctcgagggatgaaaatccatatctagatgatggaaaatattctgtttagagttctttagttgttaacatgagtttagatatcatgatatgcaataatatttcaggcaaaccgtgatttaatgcccgtgaacatgcaattgctaccgccaatatacatgtaatgacttttttaacgatagtaatggctctttttcgctaaaccaatgcattcatttaacatacagatacccctacattgctgttgtcataaatttcagccagacatgggcactgtattgtctggtgaaattttacaatgcaacacatgaaaagctacaggaaataaggccactagccaagttcataagcttcaaggccatcgtattcgccacttggtggcaaggactgggcattgcaatcatctgccatattgggatcctcccaaaggaaggcaaagttcagaatgcaatacaggatttcctcatttgcattgaggtaatatacttcttgtagtgcccagattggccttctgttatactccctccgttttaaaatgtttgacaccgttgactttttagtacgtgtttgaccattcgtcttattcaaaaaatttaagtaattattaattcttttcatatcatttgattcattgttaaatatactttcatgtacacatatagttttacgtatttcacaaatttttttgtataagacgaacggtcaaacatgtgctaaaaagtcaacggtgttaaacattttgaaacggagggagtacaatattaacatgctagtccttttcttagatggctattgccgctgtcgcacatgctttcgtcttcaacgtggagccataccagcacattccggtggtagagcatggagagatcaccagtgaagaaagtaaactagaggtgaaggtagattccgacgacgacagcaatggcacaccaaccaccattgaggagaaagagacccatgtcgaagcaccagggacaagcatcaaagagagcgttcaggatgtcgttatcggtggtggccatcatgtaaactgatcgcatcaaacttcaagaatgaattgctgatatctgtataccaagatgatcacattacattgttcatctttctgcaggttgtcaaggatgtggccttaaccatctcgcaggcgatcggacctgtggagaaaggagtcgagaaaggagtagggaagattcaggacacattccatcatatatcactgaagcccaagggtgagaaagaacctgaggtcgaagtggaggagcacatcaccgagaacacagtggatggtgaacctgtggcagttgatgcagaggtagaagtcgaaagaacggtgcaagatgataacagcatggaaggtgaatcattggtggttaatagagaggttgcaattgaaagaacagggaaagacaacaagaggtagaaatcctccacatatttgtccctcgggaatcagatgtgtcttacaaatttgatggcaactggaaaggaggaatctcctcttctttttttactgtacatagttcttttatgtactctttcaactcttgaaatcaaatggacagtgctcagatgatttccatct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0406900, RefSeq:Os03g0406900