Os03g0407000

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Revision as of 12:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0407000| Description = The start codon is not identified.| Version = NM_001056870.1 GI:115453468 GeneID:4333081| Length = 4702 bp| Definit...")
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Gene Name

Os03g0407000

Description

The start codon is not identified.

Version

NM_001056870.1 GI:115453468 GeneID:4333081

Length

4702 bp

Definition

Oryza sativa Japonica Group Os03g0407000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17332256..17336957

Sequence Coding Region

17332460..17332792,17333515..17333601,17334209..17334283,17335178..17335348,17335831..17335931
,17336200..17336277,17336630..17336786,17336875..17336955

Expression

GEO Profiles:Os03g0407000

Genome Context

<gbrowseImage1> name=NC_008396:17332256..17336957 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:17332256..17336957 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>acaatagaaaatgcaagggaatgggtgaacacaaacttcattgctgagggtggcactgacatcatgcatccattgagtgaggcaatagctttgctatcaaactctcacaatgcacttccacaaatctttcttgtgactgatggatctgttgaggatgaacggaatatttgccgcactgtgaaagaacagctcgcaactagaggatctaagtcccccaggatttctacttttggactaggctcttattgcaaccactatttcctgaggatgttggcatccattggcaaggggcattatgatgctgcatttgatacaggatcaattgagggtcggatggttcagtggtttcagaaagcttcaagcacaatagtgataaatatttccattgatgccactaagtacattcgagaatttgaagtggattctgaatatattcaagatatttctgcaaaatgcccactatgtgtgtctgggagataccaaggcaagcttccagagacacttactgccaagggttacttggctgacatgagcgaaatatcgattgaattgagggtccaacatgtaaaggatatttctcttgacaaagtgttagcaaagcagcagatggatcttctcacagcaaaagcatggttttatgaaaacaatcaactagagatgaaggtggtaaaattaagtatacaaaacagcattccttcggagtacacacgcactatcctacttcaaaacttcgtggaaaaaatagaacagggaaagcagaagccaaagaaaaacagcacccagaatgagcaatcagcgacgtcgctcaacggactgacgctcgggttcggtgacacagctgcaacgagggagaacctttccgctgggttcggggacacgaaaccaccagagaggttcgagatgttcgacaaggccgtcggctgctgcagccgcctcacggactgctgctgctgcatgtgcttcatcaacacctgcagcaagatgaacgaccggtgcgccatcgtcatggtgcagctgtgcggcgcgctctcgtgcctcgcatgcttcgagtgctgctctctgtgctgcggcgggtctgactga</cdnaseq>

Protein Sequence

<aaseq>TIENAREWVNTNFIAEGGTDIMHPLSEAIALLSNSHNALPQIFL VTDGSVEDERNICRTVKEQLATRGSKSPRISTFGLGSYCNHYFLRMLASIGKGHYDAA FDTGSIEGRMVQWFQKASSTIVINISIDATKYIREFEVDSEYIQDISAKCPLCVSGRY QGKLPETLTAKGYLADMSEISIELRVQHVKDISLDKVLAKQQMDLLTAKAWFYENNQL EMKVVKLSIQNSIPSEYTRTILLQNFVEKIEQGKQKPKKNSTQNEQSATSLNGLTLGF GDTAATRENLSAGFGDTKPPERFEMFDKAVGCCSRLTDCCCCMCFINTCSKMNDRCAI VMVQLCGALSCLACFECCSLCCGGSD</aaseq>

Gene Sequence

<dnaseqindica>4166..4498#3357..3443#2675..2749#1610..1780#1027..1127#681..758#172..328#3..83#aaacaatagaaaatgcaagggaatgggtgaacacaaacttcattgctgagggtggcactgacatcatgcatccattgagtgaggtattagaagatgatgtcagttgataattcttatgcaattgtggctttttttgttgctcatattttccatccatttctctgatgctaggcaatagctttgctatcaaactctcacaatgcacttccacaaatctttcttgtgactgatggatctgttgaggatgaacggaatatttgccgcactgtgaaagaacagctcgcaactagaggatctaagtcccccaggatttctacttttggactaggtaacatgccagattatttatttctttttattactgacctcttcacaagattgactaatctatgtactggatgaaatatcagctgatttgtggtgatgtaagtagtatcttcattcaaagttttcaatgtaaatgggaatttctaaattgtgatatacataaaagttagcatattctcttatgtgtttattagtttcttcagtacagttagtttttgtggagctaattaagaggcattcccatagtgttgtttcattctctatattcatttcagaaatgatatttacacgcttgtaatttgactagttggtgcattttataattaattcttttttcactgcgaaaacattaggctcttattgcaaccactatttcctgaggatgttggcatccattggcaaggggcattatgatgctgcatttgatacaggtaatgtcgattttccccttgactggagcactttgtttggcacactatctcgcattatgctttgaaatgcttctagaaactttttgtaagttaaatgtgtcgaaatgaacttctataatatttccactgatgaacttgggaatctctttttggtgaacttgggaatgcattaaatgtgccaaaatgaacttctataatatgctgccagtagtcgaagtcaatcaaattagtaaaacttctgatatgttttcatcgttgtttgcaccaggatcaattgagggtcggatggttcagtggtttcagaaagcttcaagcacaatagtgataaatatttccattgatgccactaagtacattcgagaatttgaagtaagttcttccctagtaatttttcacttttattcatgtcaaaaaacaacatatgccattcacgattcacctatattattaatctttgtcgacttgtggtgagtgctgaaatcatatctattaatacaaacatgcaattgcacatactgctagtcaattcattaccgagtagattgtctccatatctcagcatcctcgccaattgtcatagtcagacttgctcatgtttaaaaatacacatttataccaatgtggacctttttagaatattattttatttgtttagagtttcatcgtaataaatgtttatgaaataagtagtccttatgttttttatttattctagaaaaggtctggatagatgatatataagatcaatttatgttcttatttcatattattattgctgagtaggtacctttcttaaaactgtttctctctctctctctctctctctctctctctctctcttctaattataggtggattctgaatatattcaagatatttctgcaaaatgcccactatgtgtgtctgggagataccaaggcaagcttccagagacacttactgccaagggttacttggctgacatgagcgaaatatcgattgaattgagggtccaacatgtaaaggatatttctcttgacaaagtaagatctcgcacatatgttttgcttgttatagttacaaagggaagttgaattttttcacatagtccttaaataactcatttgttttttttttcctttttggttggtggcgatgggtgataggacaggaaattaggaactttgataatttgttgttgggggtgatgaatttggtactagaaggattttcgtatataagatgtacgttgatttattgcatgtgcaacctaaagaggcttatgaccccaagcagggaacagaattaccataaacaacgacaggagttttctaaattctgtctgagtctgcaattgctccttgtccaaggattgaattgcattgctattatccaacaaaacgtgcaagtcttgtatgttgtagcctaattttaccatacaaataattaggaagccaaaaaagccttgccaatcatgttaggaaccaaaaatatttggcattgccaaattatttggcatggttgaattgagctcatagctttgattaccaaccaaacaaaagccttgcaaatctttgccaaaattcttggcaatgactaatcttgccattcgtaaggttacaaatggcaaagaaccaaacatgcccgcagccttcaacttgatatggatatgcagttgtcatttcctatcctggcacaatgacttaacacaattattttttatcaatagcacaattagtcgattagagttagtaccatattattggcttatatgatatctgagcacctgagcccaagtatttgccttcttgagatatcactgattgagtcaaggacttgctactacaatgcactggatatcaaactgatgttattattactgaagtttgtgagcataaactacaggtatgttattctgttttatgtttaaatatcaggtgttagcaaagcagcagatggatcttctcacagcaaaagcatggttttatgaaaacaatcaactagagatgaaggtaaagtaattgttctgggataatgcttgatcccattgtttagtggcttgacgttcttaagttctgtgagttggataaatttatatccaagtccctctgtacagaatttatatcaaacttatattctgtctggtggtttgacaagtttaattatgcctcgcaaatagtcatatttggatgagttaatgacttatgtcaagcttcatgtacagtctgatggtttgacaagtttaacagctctaaccatgctttgcaaacaatcatagtaccttcctttcattattgtgttattttggtattacaagtttgcaatcgttatgttctaaacctttttcctggacctatttctgtttaattcttgtctagagtggaatgaggtttaccacagtccactgcattatgagctataaagttatgcttaatctgcattatgaggtaatctttgcctgcttgcatactactgggctttgcagcatgcaattgagatactgtatgtattggaatgaagtgtgatatatgctggtttctacttgtaactcctgctccatggtccggattaccttgtttctgagatctatctgacactcttctttgttttaattattaggtggtaaaattaagtatacaaaacagcattccttcggagtacacacgcactatcctacttcaaaacttcgtggaaaaaatagaacaggtacaacttcttttgagaattttctacaagtcatacattagtgttttcttgcagataaaaatttagttatgggctattccgtttcaaaaattataagaagtgggctattcaacttgttaagaccaaaattttgtgcgagaacattggtacaattgctccctccggtcacaaatacatattgctttggacattgacccatcttccaaacaataattttgacactcatatatatcctaatatatttgtaaaatccgtaaagttataatattatgaaagcacattttgagacaaatctacacatcattttcatttagccagtcaagagttttaaaaaatgtaataatgccctgaaattcagacgttccgatggatgcttatccaaaacaggtatttgtcaccgaaggtggtgttttgtacatgtttttcagctatggcaacaggtgagtacagtggattctttgtgatctataatatatgattgaattctatgaacaagctttcaactttcatgtttaaggataattattgtaaccatttagctttgctagtttgctaatattgggaacatatttttaattggccagttttcagaaccctagatgagactcttaagttgaaggtttttttttttaaccacaatcttccaccaaatgttcgacttcaaccgccgacgcagtgaatcccctcctagaatctaatgaatctcaccgccttttgtgcagggaaagcagaagccaaagaaaaacagcacccagaatgagcaatcagcgacgtcgctcaacggactgacgctcgggttcggtgacacagctgcaacgagggagaacctttccgctgggttcggggacacgaaaccaccagagaggttcgagatgttcgacaaggccgtcggctgctgcagccgcctcacggactgctgctgctgcatgtgcttcatcaacacctgcagcaagatgaacgaccggtgcgccatcgtcatggtgcagctgtgcggcgcgctctcgtgcctcgcatgcttcgagtgctgctctctgtgctgcggcgggtctgactgaggtaggaccaaatgctgaaatgtgcatagaattctactgtataggatgggcaccacatatatttgtatacaatagttcaagaaagacccttgtgtggatgttttgatatcggccgtctgtaaaaacctataagatggaaatcatctgagcactgtccatttgatttcaagagttgaaagagtacataaaagaactatgtacagt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0407000, RefSeq:Os03g0407000