Os03g0408500

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Revision as of 12:42, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0408500| Description = Transcription factor TAFII-31 family protein| Version = NM_001056873.1 GI:115453474 GeneID:4333084| Length = 4658 bp...")
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Gene Name

Os03g0408500

Description

Transcription factor TAFII-31 family protein

Version

NM_001056873.1 GI:115453474 GeneID:4333084

Length

4658 bp

Definition

Oryza sativa Japonica Group Os03g0408500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17430268..17434925

Sequence Coding Region

17430268..17430606,17431124..17431201,17434590..17434925

Expression

GEO Profiles:Os03g0408500

Genome Context

<gbrowseImage1> name=NC_008396:17430268..17434925 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:17430268..17434925 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaccccggcggcctgcgcccagcgccccagtcggccgccgccgccgccgccgccgcggctgcgggggcgggggcgggggcgtccgcggcggacgagccccgcgacgcgcgcgtggtgcgggagctcctgcgctccatggggctgagcgagggggagtacgagccgcgggtggtgcaccagttcctcgacctggcctaccgctacgtcggcgacgtgctcggggacgcccaggtctacgccgaccacgcggggaagccccagcttgacgccgacgacgtccgcctcgccatccagtccaaggtcaacttctccttctcccagccgccgccccgcgagtgtagtgaattctttcatagtgatcaagacttccgaagtcgaagccttccatccgataatcctttattcttttccatggttctccttgaggtggcacggaaccggaacaaaatcccgctacccaagtcgattgctccacctggctcaattcctctgccaccagagcaggacacgctgttgagccaaaattaccagctcctagctccgttgaagccaccgcctcagtttgaagaaacagaagatgacaatgcaggagccaaccctactccaacctcaaacccgagcaaccctagtccaaacaatctgcaggagcagcagcagcttccgcagcatggtcagagggtttctttccagctcaacgccgttgctgccgccaaacgccgagggaccatggatcagttgaacatgggctaa</cdnaseq>

Protein Sequence

<aaseq>MDPGGLRPAPQSAAAAAAAAAAGAGAGASAADEPRDARVVRELL RSMGLSEGEYEPRVVHQFLDLAYRYVGDVLGDAQVYADHAGKPQLDADDVRLAIQSKV NFSFSQPPPRECSEFFHSDQDFRSRSLPSDNPLFFSMVLLEVARNRNKIPLPKSIAPP GSIPLPPEQDTLLSQNYQLLAPLKPPPQFEETEDDNAGANPTPTSNPSNPSPNNLQEQ QQLPQHGQRVSFQLNAVAAAKRRGTMDQLNMG</aaseq>

Gene Sequence

<dnaseqindica>1..339#857..934#4323..4658#atggaccccggcggcctgcgcccagcgccccagtcggccgccgccgccgccgccgccgcggctgcgggggcgggggcgggggcgtccgcggcggacgagccccgcgacgcgcgcgtggtgcgggagctcctgcgctccatggggctgagcgagggggagtacgagccgcgggtggtgcaccagttcctcgacctggcctaccgctacgtcggcgacgtgctcggggacgcccaggtctacgccgaccacgcggggaagccccagcttgacgccgacgacgtccgcctcgccatccagtccaaggtcaacttctccttctcccagccgccgccccgcgaggtaaaccccaatccccccatcttgtatctcttcttccatttcacccctttttgccggattcttatgattctttagttgcttgatgggatttcctgtgctagaatcgtagattgttgccgtgcccctagcgtttcttaaatgcagatccgtaaaaccctagcttttatgccactcgatccggcttttgggcggggggaattatggtttggttgaattgctgtagattgcgctggattagtgggtgaaaaacataagattgcactagaggcttgcatttttggctaatactgatgtgattttggtcattttgccctgttgttggaattgtttgtatgcatgtagactctggataagatggatggctgaatccagggataatgttcctgctccttagaaatttgggattgaattgtttagcactgcttggttgtatctgctattttgctctcatcgcatacctttctggtgggccaataatatactattaccagtttgttctgtattatgattcatgtagtgtagtgaattctttcatagtgatcaagacttccgaagtcgaagccttccatccgataatcctttattcttttccatggtaaaattttgttacatacctgtaatcaacctgttcatgtgttgacctagccttttccaatagctagcagcctggttcttgttatctcagtggaatactgatattcccatagaatcaaccataacaggcaaacattcttcttttatgtaaaagcagcaggaaagtctctaatacaaatcatataagtaaacttgaagccggatatttctacatattctgattgtagtttctcatagagatgccatgttttcaacctccatggcttcatccattaaacatggaaccatgtatgcacatgcatggttgtgataattctatcactagcaaaacatatgtatctgcctatgctttgatggtggtgaacatatgtatctgctatgctttctatgaaaagcagggttctttggcctttcatctaagaatagttatattttgaaatataaaaagttattaatcttaatatatgcgcagaatgtagtgtgtatgctggtgaaggctcgaaacttgtgtgcggctgtggatgattgacaatatggaagccatgcaatatgcatactgaaacttattgcagactctgcactgcctacttatttgtagttaaattaattgtattcacttgttttggcggggaaaaataaatgtggtgccagtattccattgtctatgctgcatatgcgcttggggtttcctttaggtgacctaggctgaccaatcaaatggttacgcgccatctatttagtgcctaacaccttttagaccagtggtatggaaaatcatggtttaaagttgtagcaccacattagtatgacagtccagctaagaattactgttaaggaaaggtgccaatcaacagaagcagccaacttaaaccttaagttatttgtttttatctaaccatgttacaatttcaaaaagggaaagaaatctttacaatgttaggattaaatctaacttgtttaggagaagcacagtcatttcgtttcttattgatgttgatttcactaaaaaaatgaaaaagctcaacaaattttttaatacactttttggcttatgctagaatcaatcagctatgaactttttgaatctcattgatgtccattggaagattattcttttacatagttttgactaagtccaaatctgacttgtttacgagaagagtacagtcatttcctttcttattgatgttaattcactcaaaaaataaaaaaaatctgaacaaagttatgctcttggacttatgctagaacctatcagctctgaaatccattaatgatatttggagtatcagatttccaccatttcaatgattatggggcaccttgcattaattggagggattacttttttaagtaaatatgttatggattagatagggtaagggtccgaagatcaggagatagggctctcgccctctaatagtgctggcagggcttacccctgctgagctaaaaaaggctctgaggcttagggctaacttcaagagattcattgattgattcacgatagagtatatggggtccctttatagatagagcggacagacttccttaacatctaaggaactaatctctaatattgtagaaaccaatccaatgcctctctagtttactataaacctcatctccttcctaacattatttgatttactcctagtttatcatgcctaaactgccacatgggcctggcccgtgcccataacaaaacaaagaaaattatattgaaatgagtgctaatgtagtgaggaatgtttttgatgatcaacatgtttcctgtggaacaacaccacaggttattttcccccgtcttatctagttattgtaagactgattatccacagttgaacgtctgcttctttgcagtctgaatatctggtacatgtggattattggtattgaaaacaattatattattcaagccgcagacttgcagtcattagatgaaacagtgatattacatgccattctattcttgtaccacactactatacttagccttttcttacacttacatttctcaactcactaaagatcttccagtacccacctcttcatgtgacaacacattgatgagcttttcttcagacccctttgaagaatacttatcagctggccatgtttttttctgaatctgctgatttgctggttaatctggccaagagtgttttactgtaaatcgctgtttcaggaatttgtatgtcctaacaaccacgaaatagaactgttatgtgcatttgtgccagtgcatgattattttgtttttgccttatagttcacttgattgcttattcccttatcattgattaggcgctgaggctttgggttgctcactggcagtggcatgtgtccaactcttctctgtcttcattgttctggcggtagcattgtttgcaggtggctcaaagggtacgatgccaggagtgaggcaaaaataagtagttgggcttcttgtgtttggtggcctggtggattctttggccttttttgcttgctatttcctcatccattaggtattatcttctagttcatatggtgttgcttcctcataagtgcctaggcatccatgcagtggtctgacagctgggactttcccacaccttgtgccgcgcttaccatgctgggcctatttaattttagaatgcacggctaggtttatggcaacaaccaaccaaggtttaacttttacattaggagcaccactgaggtaaggctattaatagttgtggtcaagtatgggctcttaattatctaacaatatgttcttaagtactgttctgatcacaaattggaagattttgttatttaatttgatccctttggaattaaagattacatattacatttttgttgtgggatatgatggattttctctccccataaatgctatacaagcattaaaaggagccatgttatgatttattctgtatttttgtcagtaggcagccactgaaggttttcaacatgtagaattgctgattttactatatcatgcaattggtgtttcatcaccaacatgaatgtaattgctctctttttgcccttgatggttaatgatacacgtgccaatgaatgaaagccctggtggagattctgggagacttagattgtcttgcttttttttttggatgatacgtctaagttggtcctttggttagagggatgagatcgatggttcctgctgttgtttggttgttgggatcagatggtatttacatgagtaaagtaaattagaaaaaaatatttaaaatatacaaaatgttgttgactaaataaaaaatgttattcctctctggcgatttataatttaaatgatggcatagaggaccccatgattttgtgcttattcaagtcgtcttccatctaatacaagtcattttctcctttgacaggttctccttgaggtggcacggaaccggaacaaaatcccgctacccaagtcgattgctccacctggctcaattcctctgccaccagagcaggacacgctgttgagccaaaattaccagctcctagctccgttgaagccaccgcctcagtttgaagaaacagaagatgacaatgcaggagccaaccctactccaacctcaaacccgagcaaccctagtccaaacaatctgcaggagcagcagcagcttccgcagcatggtcagagggtttctttccagctcaacgccgttgctgccgccaaacgccgagggaccatggatcagttgaacatgggctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0408500, RefSeq:Os03g0408500