Os10g0214400

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Revision as of 08:33, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0214400| Description = GTP-binding signal recognition particle SRP54, G-domain containing protein| Version = NM_001070863.1 GI:115481469 Gen...")
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Gene Name

Os10g0214400

Description

GTP-binding signal recognition particle SRP54, G-domain containing protein

Version

NM_001070863.1 GI:115481469 GeneID:4348291

Length

9990 bp

Definition

Oryza sativa Japonica Group Os10g0214400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:7851358..7861347

Sequence Coding Region

7851439..7851557,7853712..7853912,7861172..7861347

Expression

GEO Profiles:Os10g0214400

Genome Context

<gbrowseImage1> name=NC_008403:7851358..7861347 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:7851358..7861347 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgcgtgcggtgtctcggtcgccgccgtcgcaccgccggcgccgctccccttccccgcggtatgggaaccggcggagtcgacgagatcggagccgatccccctacacctccacacgtcggtctccttctccaagatgggagagaagccagtccccaactcctaggaggcgtagaagccctccatcaccaagacgacaacgaagacggagaagtcgaagcaatacaagttccactgtaaataactcctgcagcccaagtcatgtatcagagcaaaacaatttaattgagaagcaaaaagaagaaggagataagaaaaggcgccaaaaggaagctgaactgaagttacttgaagaggagctcgctcgaagagttgaagaatctataagaaaaaatgttgaggaccgtttgaactccgaggacatcaaaaatgaaataaaacggcgagttgaggaaggcatcaagcagttatttgatgaggttgatgctcagctac</cdnaseq>

Protein Sequence

<aaseq>MPRAVSRSPPSHRRRRSPSPRYGNRRSRRDRSRSPYTSTRRSPS PRWERSQSPTPRRRRSPPSPRRQRRRRSRSNTSSTVNNSCSPSHVSEQNNLIEKQKEE GDKKRRQKEAELKLLEEELARRVEESIRKNVEDRLNSEDIKNEIKRRVEEGIKQLFDE VDAQL</aaseq>

Gene Sequence

<dnaseqindica>82..200#2355..2555#9815..9990#cagtcccagcactagcacggtgaccaagtcagaccggcggcgccgttgtgcttgttcgtgccggctgccacgcggagcgggatgccgcgtgcggtgtctcggtcgccgccgtcgcaccgccggcgccgctccccttccccgcggtatgggaaccggcggagtcgacgagatcggagccgatccccctacacctccacacggtacgcatccccgattaccccgctcactgtctctccatcctccccaatctgcgcatgcttctgttcgggctctggtacagtacccgctggggtgagtttttgggattggaaatttggaattcgtcacgaaatgccttccatatttctagtgctattttttcttttagaattgtggatagaagaaataaattaatcatatttaaatataataaatccacttgaaataacagatttgcttatctgggcagagtacgagacgagaaaacatatcagaaatttggattccccacgcagagtctcgagtatgaggcttgtggaagaaactcatttttcagtctatgtattgtaatgactagcggatctttttttttctgttgttgttgctgttgttgttatcataactagcagatccttttttgattgtctttgcaaatagcaatctacaaagaaaatatgttatgtgaatatagaagattatggcctcgattgagatagctcaaaatggatggataatctggttttgtgatggctatttgaggatatgagcgaatgaattgaactactgcagagtttctctagaaaagtattccaagaaaattttatatataaaattttggcatgaaatgcatcgtttgggggattgggtagcatggcaaagaaaatccaaagttgagaatcagaaaagaacagggcccctactagtgtgtcattctgcctagctctcgctgttttcctattatacaagatttactatcaacagctgtttgcaaaggacttaaatggtcatcctgttgcagaatgttatcctagaaatggtagatgaacatgtcgtgcactgcaagtgtgtgctcaactctatttccagatccacaagtgtcagtttcaaccgagccattctaacttagatacaaattgtttttgggttttttttttgtgaacccaatatttttttttgtgattcatcttttgattttatttttggtgctgaagagacatgctttcttttcagaaggtaagaataaaatttccatgtaatgtggagtagttcaatcttgtaacttcagttagctgagcatatgctgacatctgttacaattagggctaaaggctaaagcacaacttgactaaaagcatccatctttttctacctcgatagctgagctattgtttttacttagtactggagataggagtatcaaagatttgtgtctacagagatggttggaactgtatttttaacatcattttttgaactgttgaatttctttcttctttgtaagaacatttcatatatgataagctaatcctgatcttttttatattcacttttgtttgttgttcgtgattataggccatattgtttggcaaacattcaatgtggaattgtggatttactcatatgttactgttgttaatttatcatattccatgaattggcattttttataaatctaatgtttcatttttgtatcttctttgttacatgtaaattatgtgttcatcacattctttagtcatagtgttatcaagtcgtgtgattagtcacgactaggtgttgactaatcgtaaagatggtcaagccacaggactagaaggccacaactcgaccaaattgtaactcgcgctattagttgtggttagtcgtagattagtcttaaaatcggtggtagattagtcgtggttagtctagcaaatcaccaattcaccatgctaattggcttattgtgtttattccttgttgacttattgtcttgctagctactcaatagttcatagtttatactatatatagtgcttagcacagtattagtaaagactatagtgcatcccctgttttcacacgaccaagtcatggactagtcgaccatgtcaacaagtcgtggactagttgatcaagtcgacaagctcccttagctgtttacatgggcacgctgtacaaatatgaatgtttctttgcatttttggtgtccatcttggcatagtgacattccatactaatctgtttgctttgatatttttctattgctgcatgctttctatcatgtcaattcttcaactgtagttatcttgtcaatattacaaacttccatcatcttattttgtgtgttcgtctattttctgtccaattcaattcccttctatttggagaaaaagtcggtctccttctccaagatgggagagaagccagtccccaactcctaggaggcgtagaagccctccatcaccaagacgacaacgaagacggagaagtcgaagcaatacaagttccactgtaaataactcctgcagcccaagtcatgtatcagagcaaaacaatttaattgagaagcaaaaagaagaaggagataagaaaaggtaattttatgttttcttgattcctatgcagattacctcttctgtatgactgcagctctcattatatagtttgtcaagcaatatcatccatgtcaattttccttcagacctagactgtacttctgcacttgatttgattatattttgttcgccaaccaaaaaagatcaagaacatgcaaaataagatcaagaactcatcaaagcgccataggatatcacaattcaatgatgtatcacttgagctgtcggacatgtcagttggaaacacaatatagaccaatactttcttatatcttttaaaaccttttagagaaaatcatgaacagtcctagccacccatatgaactgtcctagctagccttggcactcaatgaactgtcctagccagcctgccactcaatggaacacttgtacttatttctgtatattcatggtttgagaaaatacttattttttgcaattcatatggggattgcattggaattatgctgtttcatgttaatttttaataggcaaaatttactgttggacatcacgactccgtgattttagctgtaggacaacgcaaaagtggatttttaggggaagactctcaaaatgtggcgctttgctaccggacagcgtccccactattttattattttctgtctaattagggaggagaaagaatgcggaagaggtctgaaattccctgagtgttcaatagtccaaatggcctgccaaccaattaatcagtacacgcatatatgataggatcaaagtatgcattggcacatacgcattcggctgatgttccatcaagtttactattcagcatagcagcaattatttaatattgcccataattgattcgtggtctagatatttctttgattgatatgcgtgagttgattaagctgtagcacgactaattagcattaggttacattgatgccgtttcggggcaccacggctgatctacctgcctgacaggccacttggtctaatcggaatgagaaaattgacattttgccatcttcgggatggggtttcgctgtaatgccactccggaatgtggcttcgttataatgccaccttcaaacgaagccatcttgctacaatgccatttcgaccattttttatgatttccaaatgttttccaccattttgatctttatgctttgacccaaatgcccttgtctgtcggttttagtgtgctcgagctggtcgagtcacattgcttggctgaagggagagcatatgcaacgccaccccttttcttcaccactatgccccctcaccccgcgaccttcaccgtccccgctatgccctgctgctgatagctttgcgctgcaatctccgcgctacaaaaccacgtgctttcctcggcgtcggatccgaggggccctgggggcaatgcatcaaagactgacgacgggaagagacagagctgacagcatgttgcaagctagctcaagggctcctctcgtcgtccgcccaccctccaggtttcctcttggtcctagtggaatacctctcatttgttgcccgagttgtggggaaggggtagaagagtacaaatccaagaagcaaggaggcaggatcttcttgaattgaaacctgccatcaacctctttagtatcaatctctatcacactccagggtaaagttttcaatacctctgccctccatctataaagctagtgaaaactttcttcccagctaccatataactctagcaaagccttttgcctacccgcgtaaacagtgtcatactccctctgtcccagtcattaaggcgcgcacacattttaagattcaactctttaaatatttgacttataaatagtttattataaattaaattttatttaatgaaaataatattattagattgtcatttaaatttactttcatatgattatgattttattgctacaaacattattatatatgagaaatttagaatcaaagattagttttgaagactgtccaagtttgactgtgccttagtgattgggacagagggagtagttaatagtacacttgtgatcatcttgtaacttgatcatcatctctttagggcccatacatgaattcttcatcaacattaggacagtctgttagcactgttagcccatttggtagatggtgtggtagttttccttctgcttctgctgcttgatgtacatttatgataatctgttagcactgtcacctgcaatcaagtaatagcatccatcaaattccatgcattgtgacaataaggaaacaaatgacaaccaattaattcaataccattacagtcttctggtcaggcttgcctaagcccaactattatgccaacgaaaaccatccactttgcaaccacctatgtatctgactgggtcaattttaaccaaatccaattcaaactccttgttaatagcaaattgcctcattgcaatcctaaactcaggcatgcctgggtagatagtacccacagccatacaaggattgttaggatcatatgccatcaccatcccctggaattgcatcatcaacaggaattgctgctctagtgttgtcttcatcagcagctgcttttcctttgtcagcatttgcatcttggtttgcattagttcgtctagcttgctcatcctttgcccttaattctaacaactcatagaatttatcgtccccaacaatttcttgcctccctttgtcatcattcttggccagaacctctagcctatcccaatcaacagcagtagggactggttgcactaccccatcgggtgagacaaggaaaacggattccaccgcctcatcgggttctaccacagctaagctacactcaggctccctttcaagcctggagaaaaaaaaatagatgtggcttagagcaaggtctaacccagcaaacgcgcaccaaatacttcgcagctagatctcggaagaccaaatgtgcgcacaccaaacaaattgcaaaacgatgaagtcgatgaagttaggcaaatacttacttggtgacgagctcatgacaagtgcaatctatatgctcgaccttctttgtcgctccctcacgccaccagcatcctgtcgacacattttgggggcggcgcggcggcagctagatctatggcggcggcagtgacgagcaagacgggaggaagaggcgattggacggggatccatctctctcacacaagtcaacgaaatggtcaggggcaaatatgtcaaagcacggtggagaacatttggaaatcacacaaatggtcgaaatggtaatgtagcaagatggcttcgtttgaaagtgacattataacgaagccacattccggagtggcattccagcgaaaccctatcctgaagatggcaaaatgtcaattttctcaattggaatacgttaggggcattttagacctttcacgtgttttctctctctccttcctaaaccaaaaataaaaaataaaaaagtgtgggcggtgtctagtagcaaacaaccacaatttgggagtatcttctccgaaaaatccacttttacggtgtcctacagccaaaaccacgaaaatcacaatgtacagtagcaaatttgcctttttaatatgttgagtgcccctgttactgttagtagtcatagaagaaaaatgtaattagcaaatactcatctatctggcccaatatagtagaagtcagttgatatagccgcaaagcaccagaatcaagtgaatctgttcatgttatgtctgcatgaacactgaattgaccagctgtccagattaaaccattcaatccctaaattaagcaacagcagcattacattctcaactggcccgaagctagctgccctacaaccaatattacatatgctatatatattttgtcttcttcctttgcctctgatgcacagtggccaatgagcagacattccgcacaaacagatttccattgcttcccttgtaattgtgtacttaacttttgatgaagcacacattgtccagagattaaatgctgaatggataaaaccttacatctttttagagcatgcggattgaggcgtcgtaaaatatatttcaaagtattttattcataatgtaatgactaaatgctaaatggataaaaccttacatctttgtattgcgtgctagtgccatataccaaaactgaactagtatacgtgatgactgatgagcagctaaatgccttcaccaaaagttgacctacagttggacctcacaggtctccttacactattcctatcagagtgatggtagcaaatgcaggactaatgaagggagaagggaggttaatgagaaataaataatacaaggtcagcagtagaggaaaccattgttttgatccaaaattatgcatgagcataatatgaacgtgagaataatccaacataaataggtggaagtaactcagcgatatgtagagtgactagagaaactgatgaatatgcacaaatagctggtgattagtccaaaatagtacttcacaatcatgtggaattaaaattagcaagctgaactaacaaatgataaagagaaaatccatgaaatgccattgacaagcactctaatcctagaaatgccactggcaagcgcaacttcctcaaaatgccattgtacaagcgtttttctccccgaaatgccatcacagtcaacttaccgtttagtccacacggttagaaatttttttttaccagaatgaccagattaccctcgctccaaattttactatccagaggcagtaaaagaaaagaaattggggaaaaaaaaagacaaccctaaacctaaccgatggggggcgacgacggcggcgatgtggcgcccccaggcgacggtgcggcggcggtcgcaggcggcgctctcgggcggcggcgcggggggtccctggcggcgggggtcctccggcggcggtttgcggctctcaggtggcgacgcggcggccccccggtgacggcgcgtggccctcaggcgacggcgcggcagcccctggcgacgatgcggggctcccaggcagcggcgcggcggctccaggcgacggcgcagcggccctcggcgacggcgcggggctcccaagcggtggtgcggcgtccctcgattgcgatgtggtgctcccaggcggcgtcacgacggctccaggcagcggcgcgtcagccccaggctgaaataattgatagcaaaatttctgaaataattttgatgccaaaatttgtgaatttaattttgaaataatttgattgatagaaaaataatacatgtctgtgaatttaaatatgcatcaattcaaaatgatattgtgtgagcaaacaatacaaaataatgttgtttgagcaaaaagtttgcccaggggtaagattgtcttttcatacaacttaacggagaggagttaacagcagtatggctgtgatggcatttctgggagaaaaacgcttgtacgatggcattttgaggaagttgcgcttgtcaatggcatttctgggattagagtgcttgtcaatggtatttcatggattttctcaatgataaatggggcactagaatccaacacaatataggcatgagcattaactgccgcacggtatgcatgtgtgccatgcctggtgtggccttgccaccagagtctaccctatctgtttgtgcatcatctattttcatgcacgaggctaccgaaaaccaataggctggaccctagggacactgattccggagttaatttgaagcataaacatttataccatcaggtctattcttgatgcagcataatagaagttgtaaccaatataaactgatacatctactatcgaatactaatagctcctttgagacataaaactaggaagcgtaaatataaacagtctgaaatgatgttcatggttgtttgctgggtcaggctgtcaggcatggatgcgtgactgacctctggcaaggaaatgctacagggaacttgcctgtcatgcatattggaaatgtagaaatttgactgagaaaatggaacagagaggtgaatgagcaaaacttatagctggactattttcatggatttaaaaaaagccaaataagtgatgcatgttcattgcacttactgaaaactctgttgcttagaagtgttaattgatttctctgcattaccgtgctaattgatagtaatataaagcaagataaatgttagtggcattaatgggaagtagactcatctttccaatatcttctgtcaaattcaatcgatgaatggttgaattttgctagtctaatggtaaagaaagattcaaagagatccaacatgaagtcaagtgtaaccacagacaggtgtacatgttaattttttttttctctgagtggaagtgtacatgttaagttagtatatgaacgtcgcacattcatacattcatacactctgggaaactcttcgatatgtttaaatgaattttgagcaacaaagtcaatgcttatttctcaatactataatatgaagagaaaaggcgtaagtgctaggaataatacttgtgtgttctgaaagtggagtatgtggttcttttataagctgtctggtcaactatgttcccgtaagaagttaagatagtttttgttgtcatctgttaacactatttatgtttggggaactttcacagattagaatatacctgctttatccatcgatcaaaggcttgaacatgtataatattgttacctaggttttttccctcacccttgtttcttcccttgcttaatgaaatgatgcacttctctcttgagtattcgagaaaaagagaggaacattttgtgtctctcttttcaggaatcatacaaaaaaagagagtcaaatttcacatgattcaaaactagccatgcagtgcttgtgttctgcagtgtcttgcagaaattagagtttatatgtgctttaatcacctccctctgcctgccaattttcttcttaatttagtgaaccggtaactaatcaactgtcacatgaaaaatgaacatttctatcgtttccacattggctgttttttttatgctttgttttcccttgtgcttttcagctcaatattctactgttgtaattatatttatgcttatttagacattgcatgccaaattttactagaatccacctattttcaaccagaaattctataacaattgtactagagtaacttgactatttagtttgtacttttgtgttcatatatagttccatagtacattaattctattagttcatgcttacatggattgcagtttggctaggttgtaccagttcccgtaactttgtgtttctctcagcaggcgccaaaaggaagctgaactgaagttacttgaagaggagctcgctcgaagagttgaagaatctataagaaaaaatgttgaggaccgtttgaactccgaggacatcaaaaatgaaataaaacggcgagttgaggaaggcatcaagcagttatttgatgaggttgatgctcagctac</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0214400, RefSeq:Os10g0214400