Os03g0410100

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Revision as of 12:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0410100| Description = Peptidase C48, SUMO/Sentrin/Ubl1 family protein| Version = NM_001056877.2 GI:297601079 GeneID:4333089| Length = 3944...")
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Gene Name

Os03g0410100

Description

Peptidase C48, SUMO/Sentrin/Ubl1 family protein

Version

NM_001056877.2 GI:297601079 GeneID:4333089

Length

3944 bp

Definition

Oryza sativa Japonica Group Os03g0410100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17524624..17528567

Sequence Coding Region

17527725..17527883,17528100..17528162

Expression

GEO Profiles:Os03g0410100

Genome Context

<gbrowseImage1> name=NC_008396:17524624..17528567 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:17524624..17528567 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tacattatcgacatttgtgttgtgcatatcaatgaccaagcatggtccgcatggatatgtctgacactgaatttctcttttaataggtgggattgtggtatgtttatgcttaagttcattgatttccacagtagaggtattggcctatgctttactcaggaacatatggattactttaggaaacgaacagcgaaggagatactgagattgagagctgactga</cdnaseq>

Protein Sequence

<aaseq>YIIDICVVHINDQAWSAWICLTLNFSFNRWDCGMFMLKFIDFHS RGIGLCFTQEHMDYFRKRTAKEILRLRAD</aaseq>

Gene Sequence

<dnaseqindica>3102..3260#3477..3539#acttcaagtctccattcctccatcgccgcctcgatctactcgccgatggcgctctcccctcccgcggccgcgcgctcttagcatccgccgccgcctccgccgccgtccacgccttcgatccactcccatgtcggagccgccggcctcatcctgcctgcttcagtaggctaaccgacaggggggaattccggccgggagccaggctgggcgcccatgtccccctccgccacctcgccgccgaatcgcccacaccgcaagcgccgcgccggtgccggtggcggtggcgctgacgacggctcgacccgccgccgcggccgcagcgctgtcctcctcggccccacccacttccccgccgttcgctccttcggcctccgcctcgccctcgtcgtcgccccagccccacgtcaccgccgcaagcagcgcccgctccactacgcctgccgccccacctcccttccctgtcgccgccgccgtcgcctccgcagtatcatctccctcctccacctccccatcctccgcccgttctacctccgctacatcctcgcggcagccgcatcaggcccctgccgctgccgccggaaggaatccctggtaggcatgggaaactacatctcgcgggtgctccggaagagctctagtgaccgtggtaaggcgccgccagccgacgatacagccaagcaggtacccaatttttaatctaattgagtacatctggcatgtaatttgcttgaaccgtcagtttgcacagtaaaattgacaatgcaacatagtttcaaaagatggtaatacgtttgagtcaatccaaattgcttttagtgaaataagtggataagtaggaatttatattagctatattgtatcaagtattttaatccacaagtgagagtaaaaagttaagtacttgcatttccagcctgttcatttttttttcttttgaagtcaaatactgttaactaaattaatttgagcactgcaaattgacctttgttgtcatattttatccttgactattccaggatctatgtgaagtttttacacctctgacaaatgaagaagaaagtgaagtaaacaacattttgtatggcagtgatcaaaggtattgtaggcaaccatgaatttaattggctgattacttctcctatatctttagcacaatcaggaattgattttccctttctttttttgcagtaagaaaataatagtgatgcatggaccttccaatattgatattactaaagagaaaatctggtgcttgagaacttgtaattggttaaatgatgaggtgaatacggcctgtccatggaaggaatcctgaagaatatgttaaacaaatgtcccattctttctgatcttgacattagtggttccattttccatgcttcacagaaccaagactgcatcagcattctacttttgttccttgcaggtcattaatttgtaccttgaattgttaaaggagagggcgcaaagagaaccaaaaagatttttgaaatgccacttcttcaatacattcttttataagaaggttagataatttgcatatttttctttccggtgctgtatgatggaatgttcttttcaatatttctgtagttctgttacacacaccattttatgatcttcagcttatcagttgtctctttgaagcactatcaagtgatatttatgcaattattacttgactcttttccctttttttgaggggaatttattattttccttccatagtaggaattatctgccagttagcaggaaaacctgtgattcttttccttcgatagtggaaattgttggctagtttgcacaaaaaacctgtgtttcaacactcaagcatacggtaccatacatttgtttgagaacacgcaattcctaccttatccttaatatatgttgatgtgtgccttgtatttacttaattgatgacccttttcttgagttacaaattttgtgtggttgttattctcttacttttttttttgctaattttccttgtaggttgtaacatcccttactatcccttactatttattaataaccttgcttagatatcaaatgaattctagcagtagtttgcaccttcatgattttctgaattctcttcagcttgcttgtggaaaaactggttatgactatcaatctgtaagaagatggacaaccctcaatagattgggctatgggcttgttgagtgtgagaaagtaatgttactgttattattttttcaatgtttttcatgtctgtttgtctttcaaacaaatcatgagatttattgtgcagatctttattccaatacatagaaatgtgcattggtgccttgcgataataaacatgaaggataaaacttttcaataccttgattcttttggcggcatggaccatgctgtgctgagaatactggtaagcttagctgattacaagtatattactggattagagagccagttacttccaattagttcagttacaagtccgacttatgagacgttagtttggtaagatggcacattgatgacttaacagttgattcagtcatagcatttggacttaattgctccaaattaattttgctaagtatgttatggtgctctctatttggatgccataaatctccagctcccacaatagttaaagggtggacaaaattttacccctgatgcattcatggacttattttttggtgctatagaaatgagaaaggtcttacgttatcacaaatatttgtgatatcttaaaatctgacatgattcagagttattctttgaaatttaaattgtgacttacgaagcagtaatccatgttaattagaatttacccatcaggtgctatttcaagctttcagttattttcaagtgaagttctgttttctattcctctcaggctagatatatcagggatgaattgaatgacaagagtaacatacaggtagacaccagttcatggctgaaaatatcatcagattcttgtcctttgcagcagaatgggtacgttctctttacatgctacatatgacctaccagaattacgtatggaatgaataatggtttaccttcggttctgcaatgaacacagatgaaggtctaaattttatcactcagtgcattaatacattatcgacatttgtgttgtgcatatcaatgaccaagcatggtccgcatggatatgtctgacactgaatttctcttttaataggtgggattgtggtatgtttatgcttaagttcattgatttccacagtagaggtattggcctatgctttactcaggtgagtatagtacaaaatactggattcaagttattatatatgcttaatctgttcactcattgatttgctgtttgcactattaagtcaatctcaaatgaagagtcttaacctgctaagatgaagcacaatctctctctttcatacatctaaagtggagtaacatgtaccttgtacttaattgtgtttggtgtcatctaaatcaatcactatttgcaggaacatatggattactttaggaaacgaacagcgaaggagatactgagattgagagctgactgaaaagatgtcctttcttgttcacacactcttgggcattttgtcaaggtaggtattcttgcgacctattggaaaagacataatgatgtatttattttctactagggtgttttgttgattacaagtggctggaacaattttgcataattctttaccccttcattttctaggatcttattttgatagaatagggagagattgaaatgagaccccaagggaacaagacagagctaacagaagtcggaatgtaagagcttagatgattagaacaagaatgcttaacccataccatgtatagccgccaattagaactataaagagataaaagggggtatgaatccacattttgttattctttaaaatattcaagtgaactgttatgaaatagatatgaggtgatttacatca</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0410100, RefSeq:Os03g0410100