Os03g0411800

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Revision as of 12:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0411800| Description = Similar to Metal transport protein| Version = NM_001056886.1 GI:115453500 GeneID:4333098| Length = 3237 bp| Definit...")
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Gene Name

Os03g0411800

Description

Similar to Metal transport protein

Version

NM_001056886.1 GI:115453500 GeneID:4333098

Length

3237 bp

Definition

Oryza sativa Japonica Group Os03g0411800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17643988..17647224

Sequence Coding Region

17644198..17644592,17645736..17645865,17645982..17646040,17646687..17647179

Expression

GEO Profiles:Os03g0411800

Genome Context

<gbrowseImage1> name=NC_008396:17643988..17647224 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:17643988..17647224 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgggaggcaggggagcccgcgccagcctccacctccacctcgcctggctctgcgccttcgcgaccaccgcgtgggcgcatggcggtggcggcggcgggggcgattctgacgccgacgccgacggcggcggcgaggggaagccggacctgcgggcgcgggggctggtggcggcgaagctgtggtgcttggcggtggtgttcgccgggacgctggccggcggcgtgtccccctacttcatgcggtggaacgatgcgttcctggcgctgggcacgcagttcgcggggggagtcttcctcggcaccgccatgatgcacttcctcgccgacgccaacgagactttcgccgacctcctccccggcaccgcctaccccttcgcgttcatgctcgcctgcgccggctacgtcctcaccatgctcgccgactgcgccatctccttcgtcgtcgcccgcggcggcggccggaccgaacccgccgccgccgccggtgcagggctggaggagggtaagctgagcagcacaaatggcaacgcctctgacccaccagcagctgatgcggcggcgcaagaccactccgtggcgtcgatgctgcggaacgcgagcacgctcggcgacagcgtgctgctcatcgccgcgctctgcttccactccgtcttcgagggcatcgccatcggagtcgccgagacgaaggctgacgcatggaaggcgctgtggacgatcagcctgcacaagatcttcgcggccatcgccatgggcatcgcgctgctccggatgctgccggaccggccgttcctctcctgcttcggctacgccttcgccttcgccgtctccagccccgtcggcgtcggcatcggcatcgtcatcgacgccaccacgcagggccgggtggccgactggatcttcgccgtctccatgggcctcgccaccggcatcttcatctacgtctccatcaaccacctcctctccaagggctacaccccgctgaggcccgtcgccgccgacacgccggcggggaggctgctcgccgtcgtcctcggcgtcgccgtcatcgccgtcgtcatgatctgggacacctga</cdnaseq>

Protein Sequence

<aaseq>MAGGRGARASLHLHLAWLCAFATTAWAHGGGGGGGDSDADADGG GEGKPDLRARGLVAAKLWCLAVVFAGTLAGGVSPYFMRWNDAFLALGTQFAGGVFLGT AMMHFLADANETFADLLPGTAYPFAFMLACAGYVLTMLADCAISFVVARGGGRTEPAA AAGAGLEEGKLSSTNGNASDPPAADAAAQDHSVASMLRNASTLGDSVLLIAALCFHSV FEGIAIGVAETKADAWKALWTISLHKIFAAIAMGIALLRMLPDRPFLSCFGYAFAFAV SSPVGVGIGIVIDATTQGRVADWIFAVSMGLATGIFIYVSINHLLSKGYTPLRPVAAD TPAGRLLAVVLGVAVIAVVMIWDT</aaseq>

Gene Sequence

<dnaseqindica>2633..3027#1360..1489#1185..1243#46..538#accatttggcgcacccgtcatcggtcgaacaccacacctgcgtccatggcgggaggcaggggagcccgcgccagcctccacctccacctcgcctggctctgcgccttcgcgaccaccgcgtgggcgcatggcggtggcggcggcgggggcgattctgacgccgacgccgacggcggcggcgaggggaagccggacctgcgggcgcgggggctggtggcggcgaagctgtggtgcttggcggtggtgttcgccgggacgctggccggcggcgtgtccccctacttcatgcggtggaacgatgcgttcctggcgctgggcacgcagttcgcggggggagtcttcctcggcaccgccatgatgcacttcctcgccgacgccaacgagactttcgccgacctcctccccggcaccgcctaccccttcgcgttcatgctcgcctgcgccggctacgtcctcaccatgctcgccgactgcgccatctccttcgtcgtcgcccgcggcggcggccggaccgaacccgccgccgccgccggtgcaggtgagcagcctactagggttttcacgtgcttgtccgactctgtttttttcacagtagagatatcgtgagctcgcggtggaaaggtggcggatggccgttggattagatgcgactttttcctttattgctgcgttagtacataataccacaccgattgattggttgctattattggttggactggtcagcgaaatgggccaaatttactcctcttgttttacagttttactactacctgatcaaaatcttgtgagtttgtgtgacctaccctaccctgatgctttcagcgagataggaactgatttgtttggttgttcatctttttgttggtgtggcttgtactctactccgtttgcaaatcagttagcagatcaattcaattgtggtgcttagttagttactttatattttttttgtgtctgtctgaatcgataggaacaccttggtgctactaccattttcctatgatcttatctgaatgaaagcatatatagtaggtggtggttattgcctgtactgcatagttcctcttaattactgtcctactcataagttattttgtttagcctgctgctcaaatggccaaaagagaagtatttttgctgctcgcattatctaattaagcattggattatctgcctgtcagggctggaggagggtaagctgagcagcacaaatggcaacgcctctgacccaccagcagctgtaagcacctttccttatgaactcgagtaatttatcctgcgcagcaacagcgcaggttgttgcgtttggtttccaaatggaagaaggctgtgaagtctcaacttgtgtttgtgcaggatgcggcggcgcaagaccactccgtggcgtcgatgctgcggaacgcgagcacgctcggcgacagcgtgctgctcatcgccgcgctctgcttccactccgtcttcgagggcatcgccatcggagtcgccggtaagattattattatttttttgacatagacacgcatggatatactccctccgttgattcttttaaacatatttgacgttcgtcttattaaaaactttttgtgaaatatgtaaaactatatgtatacataaaaatatatttaacaatgaatcaaatgatacgaaaagaattaaaaattacttaaattttctgaataagatgaacggtcaaacatgtttaaaaaagtcaacggcatgacggagagagtatatatatagagagacctcgtgaccttgtccgttagtctcttgtccggttgtccctgcctgctcgacttaattaacactcgctttcagcttggaatttaaatggcccgtacatatgtcttcatgtgactttttatatgaagaacgagttcatatggttaatagttaatggtagttcaggtgtctataggagtaggtgaatctgtccttttttttaaattataagtgaacagatgatcacgtataaacacgacatatggaagtattgacgggcagagcttttgcgcgttcgtgaaaaaaaaatgcttgaaagtatcatttaagcccggggtttcttcctagcttgtttcttgtgaaagtctgatagatcgatgccgctgctaactgattaggacaaattggaatcgtgcgttgttttctcggtcaaaattgcacaagtgcttcactattttctcatagcgaaagctccgtgcgcatgttgaagatagccagaataaatgaaaaaagtcctaggactcggcttatattcaaagccaaacataggcagaataatcaccccgaacccttcatttttattttatttttattttatcttgggttcacgtcttatcgccgtttatcgcaatcaatgtttctgttcactcattgtcacgcatacttttactcgttccagtctagtagaatagatgctctgacctgaatttccctttcatcaacatccatttcgacaacattttagtttgcatcgatctcagcaagctttaccaaaccattcaaatcatgaattcatggatcaccgtagtccatttaaagatggatgcagattgactgacagtggctgtttgagtttcgactgctggaaaatcagaatcagctactcacaacaactagcgtgcagagacgaaggctgacgcatggaaggcgctgtggacgatcagcctgcacaagatcttcgcggccatcgccatgggcatcgcgctgctccggatgctgccggaccggccgttcctctcctgcttcggctacgccttcgccttcgccgtctccagccccgtcggcgtcggcatcggcatcgtcatcgacgccaccacgcagggccgggtggccgactggatcttcgccgtctccatgggcctcgccaccggcatcttcatctacgtctccatcaaccacctcctctccaagggctacaccccgctgaggcccgtcgccgccgacacgccggcggggaggctgctcgccgtcgtcctcggcgtcgccgtcatcgccgtcgtcatgatctgggacacctgatgccgctcatgatttcggacgtttgttggttcttgcaggaatgtgtgtgtgtagtaagttcgtcgtgaaattagcatgtgtaaagtttgtgccactccaaccaaagtttcaggattatttatagctttgaatatatcatcaacgctggggcaccattgtttttgtttccatggattttgggggtaagaaattgaccaaaatttaagttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0411800, RefSeq:Os03g0411800