Os03g0412050

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Revision as of 12:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0412050| Description = Similar to mutator-like transposase [Oryza sativa (japonica cultivar-group)]| Version = NM_001186543.1 GI:297722216 G...")
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Gene Name

Os03g0412050

Description

Similar to mutator-like transposase [Oryza sativa (japonica cultivar-group)]

Version

NM_001186543.1 GI:297722216 GeneID:9270189

Length

2864 bp

Definition

Oryza sativa Japonica Group Os03g0412050, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17661921..17664784

Sequence Coding Region

17661921..17661957,17662062..17662360,17662441..17662644,17662687..17662854,17662940..17663306
,17663793..17664784

Expression

GEO Profiles:Os03g0412050

Genome Context

<gbrowseImage1> name=NC_008396:17661921..17664784 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:17661921..17664784 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cgtgcagcggctccatcgaccaccgttgctgaccctcctcaatctcttggacctctcccaacggatagtccaacattggttagaagaactggagtggagattcggaaattttctcagtggattctgcatgaaccaaaagagaaatgggccaaggcgtatgacacaggtgatgctagatatggaataatgataacaaatttggcagaagtttacaactgggtgatgcacggtgtccgtggactcccactagttggcatagtggagttcattttacaagggacatgcaggtattttagggatcggttccaggcagttcttccctctatgccgaacaacagcattttattcggaactttcatgcagaaaaagctagaggagttgcgtaaaaaggccatgaaacatcgagctctagtgcaaggtacccaacagcacaggtttgagatactttgtcaagataaggcaggcaggggtatctaccgtaagagagtgaagcaggaatgtgttctcaaagccgacggcacatgtcattgctcttgtgcaaagccgaagctgctccacaggccatgcacccatgtcattgctgccgcaacggagtgtggcataccatatgcagtatatgtgtcacagtacttcagtaagcaagcagtatatcatacatggagtggcgagatttatgggttcggcatagctggggagttcacagagactaacaatgaagtactaaatattcctgacccatcgaagctccgaggcaaagctggaaggaggaagactcgtcgcatccgcaatgatatggacgagtcggaggctggcagggtgaagcgttgcagcaaatgcaatgaatgtgggcacacctacaagcattgtcctaaagacaaggagaaaccaaatgcggcggaggcaggactatcaggatcagcagcaaatggagctcgccctacgggtgaaggcactacctcaactcgactacgtcctaggcgtcgtcgtgccacgttgcgtgaggccggcctcctaccgatgtgtcggctggtggaggctgcagccggccacgcggacccggccaaacgctggaatgtggaccggtccctcctagcagctttggtcgaccgatggaggccagagacgcacacttttcacttgccatgcggtgaggtagcccctaccctacaggacgtatcgtacttgttggggctaccgctcgcgggagacgctgttgggccagtgaccacgggtgtggactggaaggatgatctgacggcacgtttcacaccagtacatcgcgcaccacatctcccactccagccgttggcacaccaccgcaacaccggacctacgaagaggtggctacttcagttcatcgtcgagcagctacaggcggaggccgacgagtactcctacagccgttgtttggaggcgtacttgctcttactttttggctgggtgatgttctgtggcggtcacgggcacgcgttcgacaagggactcgtgcactacgccaggagcatcgccgacgccgtggtaggcgagtaccgtggcctttgtgaggcttgcacgaagtcggatcccagcacgacctttggtgggtgccctctctttctttctatctgggcagctgagaggattacgatcggccaccctgaggtggaccagcatgcgtacgaggagtcactgtacgcggagcgaccggaggtcgactaccctacgatgggtactctgtggtgccgtcgtcagcgccgatgggctcacgtccaggttaggcggtcgtatcctgagttcgttatggagttcgaccgccttctgccgactgacgtcgtgtgggagccctacagtgccgcggctacccaggctcgtgcgccgttgggtctgtccacactctgcacaagggaccacgcgtactggacgactacggttccgatggtcttcgatatctatgttgagcctcacgcccctttccacgtgatgcggcagtttggcttccgtcaaccttttccagtaccgtttccgacgaccgtcccagctgctgttcaccggtactcgcacaagggtcagcagtcagctggcgactag</cdnaseq>

Protein Sequence

<aaseq>RAAAPSTTVADPPQSLGPLPTDSPTLVRRTGVEIRKFSQWILHE PKEKWAKAYDTGDARYGIMITNLAEVYNWVMHGVRGLPLVGIVEFILQGTCRYFRDRF QAVLPSMPNNSILFGTFMQKKLEELRKKAMKHRALVQGTQQHRFEILCQDKAGRGIYR KRVKQECVLKADGTCHCSCAKPKLLHRPCTHVIAAATECGIPYAVYVSQYFSKQAVYH TWSGEIYGFGIAGEFTETNNEVLNIPDPSKLRGKAGRRKTRRIRNDMDESEAGRVKRC SKCNECGHTYKHCPKDKEKPNAAEAGLSGSAANGARPTGEGTTSTRLRPRRRRATLRE AGLLPMCRLVEAAAGHADPAKRWNVDRSLLAALVDRWRPETHTFHLPCGEVAPTLQDV SYLLGLPLAGDAVGPVTTGVDWKDDLTARFTPVHRAPHLPLQPLAHHRNTGPTKRWLL QFIVEQLQAEADEYSYSRCLEAYLLLLFGWVMFCGGHGHAFDKGLVHYARSIADAVVG EYRGLCEACTKSDPSTTFGGCPLFLSIWAAERITIGHPEVDQHAYEESLYAERPEVDY PTMGTLWCRRQRRWAHVQVRRSYPEFVMEFDRLLPTDVVWEPYSAAATQARAPLGLST LCTRDHAYWTTTVPMVFDIYVEPHAPFHVMRQFGFRQPFPVPFPTTVPAAVHRYSHKG QQSAGD</aaseq>

Gene Sequence

<dnaseqindica>2828..2864#2425..2723#2141..2344#1931..2098#1479..1845#1..992#cgtgcagcggctccatcgaccaccgttgctgaccctcctcaatctcttggacctctcccaacggatagtccaacattggttagaagaactggagtggagattcggaaattttctcagtggattctgcatgaaccaaaagagaaatgggccaaggcgtatgacacaggtgatgctagatatggaataatgataacaaatttggcagaagtttacaactgggtgatgcacggtgtccgtggactcccactagttggcatagtggagttcattttacaagggacatgcaggtattttagggatcggttccaggcagttcttccctctatgccgaacaacagcattttattcggaactttcatgcagaaaaagctagaggagttgcgtaaaaaggccatgaaacatcgagctctagtgcaaggtacccaacagcacaggtttgagatactttgtcaagataaggcaggcaggggtatctaccgtaagagagtgaagcaggaatgtgttctcaaagccgacggcacatgtcattgctcttgtgcaaagccgaagctgctccacaggccatgcacccatgtcattgctgccgcaacggagtgtggcataccatatgcagtatatgtgtcacagtacttcagtaagcaagcagtatatcatacatggagtggcgagatttatgggttcggcatagctggggagttcacagagactaacaatgaagtactaaatattcctgacccatcgaagctccgaggcaaagctggaaggaggaagactcgtcgcatccgcaatgatatggacgagtcggaggctggcagggtgaagcgttgcagcaaatgcaatgaatgtgggcacacctacaagcattgtcctaaagacaaggagaaaccaaatgcggcggaggcaggactatcaggatcagcagcaaatggagctcgccctacgggtgaaggcactacctcaactcgactacgtcctaggcgtcgtcgtgccacgtctggctacgtggtgtagttcttgtgttctatgttggcatgtggctttgcttgtaatttgtttcgaacttaccgatgtgtttatgtttcgtcgtgtaatgtcagacttcggcatgtcatgtatttaggtctcgtgatgtaacgtcagacttaggcacctaatgtctttaggtatgctgatgtaatgtcggacttcggcatgtaatgttatgttattttatgttatattatcgaactctacatatatgttaaattgcacgtcatcgttatgtacccttagtaacatttgctatatttaaatagcctgtactcttgttgtacataataattcttatgattttattactttttcataattttacaagttatcttttgttctacattactactttttgaattgttctaacataaaacactatatttttcagagatagcacgtcatgatacacctaatttttataatgacatattaatttgttcttgcaggttgcgtgaggccggcctcctaccgatgtgtcggctggtggaggctgcagccggccacgcggacccggccaaacgctggaatgtggaccggtccctcctagcagctttggtcgaccgatggaggccagagacgcacacttttcacttgccatgcggtgaggtagcccctaccctacaggacgtatcgtacttgttggggctaccgctcgcgggagacgctgttgggccagtgaccacgggtgtggactggaaggatgatctgacggcacgtttcacaccagtacatcgcgcaccacatctcccactccagccgttggcacaccaccgcaacaccggacctacgaagaggtggctacttcagttcatcgtgagtgtttttgtaccgaaatgacaagcgtactacatatttagtcgtaaggtaaggtgcctaacattttatcgaacgcttacaggtcgagcagctacaggcggaggccgacgagtactcctacagccgttgtttggaggcgtacttgctcttactttttggctgggtgatgttctgtggcggtcacgggcacgcgttcgacaagggactcgtgcactacgccaggagcatcgccgacgccgtggtaggcgaggtgcctcagtggagctagggttccgcgttgttggtggctcagtaccgtggcctttgtgaggcttgcacgaagtcggatcccagcacgacctttggtgggtgccctctctttctttctatctgggcagctgagaggattacgatcggccaccctgaggtggaccagcatgcgtacgaggagtcactgtacgcggagcgaccggaggtcgactaccctacgatgggtactctgtggtgccgtcgtcaggtacgttgcatcgatcttctcttattgttaagttcattgctaagttcattgtacatcacatcgatcatctcgtattgcagcgccgatgggctcacgtccaggttaggcggtcgtatcctgagttcgttatggagttcgaccgccttctgccgactgacgtcgtgtgggagccctacagtgccgcggctacccaggctcgtgcgccgttgggtctgtccacactctgcacaagggaccacgcgtactggacgactacggttccgatggtcttcgatatctatgttgagcctcacgcccctttccacgtgatgcggcagtttggcttccgtcaaccttttccagtaccgtttccgacgaccgtcccagctgctgttcaccggtaagatctttcactacgctttgatttgttgcattaaaatctacctctccacaataatttgcaacatctgttgattcacactaatatgatacattaattcgcaggtactcgcacaagggtcagcagtcagctggcgactag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0412050, RefSeq:Os03g0412050