Os03g0412200

From RiceWiki
Revision as of 12:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0412200| Description = Conserved hypothetical protein| Version = NM_001056888.1 GI:115453504 GeneID:4333100| Length = 4618 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0412200

Description

Conserved hypothetical protein

Version

NM_001056888.1 GI:115453504 GeneID:4333100

Length

4618 bp

Definition

Oryza sativa Japonica Group Os03g0412200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17675259..17679876

Sequence Coding Region

17675536..17675599,17678878..17678975,17679284..17679517

Expression

GEO Profiles:Os03g0412200

Genome Context

<gbrowseImage1> name=NC_008396:17675259..17679876 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:17675259..17679876 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccgcatcacctgaaccgccccaccgccgatgacgctgccgccgccgacgacgactgggataatgatggctttgtgataccaagcttgagtgttgaagaatctgatcttggtgattgggaagctgcacaggtttctcgtcctcaaccacctccaaaggctaccaaggataccgagaagatatatcttggaccgcacggcgcaccgccatctcgagcaaagaagcaagaggacactgcagcagctgccactgggtaccgcgacaagagcaaggtgaaggaagctgatcaaaaggtgcttggaactggccgggacaacaaagggggcaataacttcaaccgctacaacaatgctggccaccatgtcaaggaaccctacaagagatccacttga</cdnaseq>

Protein Sequence

<aaseq>MDPHHLNRPTADDAAAADDDWDNDGFVIPSLSVEESDLGDWEAA QVSRPQPPPKATKDTEKIYLGPHGAPPSRAKKQEDTAAAATGYRDKSKVKEADQKVLG TGRDNKGGNNFNRYNNAGHHVKEPYKRST</aaseq>

Gene Sequence

<dnaseqindica>278..341#3620..3717#4026..4259#acggtttccaaattccagcagtctctcttcccatctcatcttgcttcccctcccctcctcactaccatctactcccatcccatccgccgccaatccgccgctgcagccggcaccggccttcttccacgccggcggccggcacccggcaggcagagcctacacaccaggccgccctcctcctcctcctccccggccgccggtacctgaggggaagaagcttcgcagctcgggctctcacgccctgaggcgtccggagttcgatgtccgtttgcatctcatggatccgcatcacctgaaccgccccaccgccgatgacgctgccgccgccgacgacgactggggtaacgcgcccccaaaacacactctcccctccccgagtccccgtcacccgcggcggccatctctctctcgttctttctccctgttgtttaaacctttatctaggcttgtaatcttgatgcgcgggtgttttagggatgtggaagaactagaggtgtgatttagtctgtgctgtgtttgtggtgccatggggctcaatcaaatcagacagccataactagtaattaccaattagagatggcgagatttggttaacagttttagcttcaacgactagatatgcaagtacccgtaggtgattgtaggtaattattactaattgttcatagtgccgataaggaattactcctatttaaacttaattgtaggtaatgcagtggctctgttgagttacgaatagctgtttaatagaacctaaattatgaatagctgtttaatagaatctaaattgcgactacaatgataaacgggtgaaaaaggtttgggagctttttttagtcatctgctatacctctattttttacttcgcagtctataatctgagctgtcagccattctagttacagacatgtttaaagttatttagatttgttgtatgagatttgtatcacttaatttgttgtcaaagtacttttcatgattataccttgatatatacccactctaagtaatcttgaagaccatgataggtcagaaaggtcaacaaaaaaaagagttagcagtaaagaactatgatgctttatcatcaactcattctttagtcctgttttggatagggggatttggattcaaatttgaactaactctaaagaaaaaccctctcacccatacagtccattaggataatttagacttattggtaacaataaaattgatgtttcagctaattctttgttgatgttctgttctctgttttttatagccattgcagacagtacggaatcttacataggcttgattttcgcaaagaaaaaaactacactaatgttggtgacctttaatttatagctgcctttgttgtgattccattgagcatttttttctcactacctcttgcgtgatagttttttcaataacttgatctaaaactatgaatttttcattttattcttaaactgcaattaatctgcatatgtattatttttttatcattttcatctctcatctcatccccatctaatatcaatagaatccaactttctgtctatccatcgaactgtttcttctccatgtcattgctcatttacctgctcattattcagtgccaatctgctccatctctctccttcctgtcactattgtgccttacagattcatgtgaggaaactacactaatgtagtggaaaaaccaaagacctaaacaaactgatggcatgaattttaaaaaagaaactaattcatatcatagtagacaaatagttctacattggaaagactatttctcttaggaaaaaggcaactcatgaggtggtagggggatgacagactcaccgccaccaccactaggtcctttttatatactgtagtggagataaatttaactgaacctcggtaagaaaaaaaacattcagtgatgtctgagtcaaaagaaaatattggtgtggcatctctagttactatgtgacaaagtttggagtatagttatcactgaaattgctagttgtagttctttatcaaaatcatagctccacgaacagaaaaaatcaagcatggtcttccaattgtgccagactttgtatcttctagtttctctccaaaccaggttcatcaaataattactcagaccaaagagtgacgtatgctctatcaatccatgttgctggggacacaggtcaaagatctcttgtaaagaactaaaaatggtttcatgtgtcttgagtggtttcgtttgataagttttgcaggttttaccttgaaaatggttgagctgcacatctgaaacctaaatttttgggttacattataaattataaaaatgttaatgctgcttttgatatttgatgcagtagaaaccacaccagctagtcagtcatgattaagaaagaatgacaagagcaatgatgactagatgaattgcccaggaataataaatggtgtaatatatgatattcattattgcagtttcatatctaggataggggaactgaaatttatgttagtgagctcaatagttaagctatggtcatgacggcatgtatacagatgtcaggtgaggactcctttatcgtcggcaccagaacaaatgtggcaacaatgacgcagcacaaattcaggattagattgagttagttttatctttctgggcttgttagttttcagttgagaataatgtggctggcaacagcattgtataagctgaagatcggcctattttgcttagcttggagattaggttatgctgagcttgcgtcctgcctcttccacgcagtgcctatgatggctccgccacgccatcgaggtccagggccacatcttgtaaccagcttcaaatatagtttatgttgcgtttcctcatctattatactagcccgtgacaatagaagccataatgaggcacattagaaaggactaaactatacattacttgaatggtatggcacagtggcacagattccaagtttctagccaagaagtaacaagtaatacaaggaactgtatgtcaactcatccaaagattccttgatgtggactgacataatgttggacaaacacaactaatccatctcattgtcctaggctatagccaatggcacgttttaaagtcaccaacataaacacatttgaaattgctcttacaatatttattatgccgtttcaattgtacctaaatgcccttttagacatcagatctcacaggaacaatagttagatattcccatgaaaagtagagttagataatattttgcggctttgcaaagataattgataggcaagatgatgaagcagtgtagcatttgactaaatgtggaaatatgggctgcatctctaatttctatgcctcctaccctgaagctgttctttccactcccaagattctgcttgctagatcttgttactagttgcatttgttttcttagttctcttatcagttaggtgatttctttaggctgatttggttgctcaagttcatctgtctttggatttgtctgcaccccttcgtttccaggcttctttacgttttctttgtcaattgctcctgacattattatactttcatttggaggatcaatcaccagttcagtattgaggaaaatgttcttacatgtgcgtaatgtcacagataatgatggctttgtgataccaagcttgagtgttgaagaatctgatcttggtgattgggaagctgcacaggtttctcgtcctcaaccacctccaaaggtctctttcacatcacactattcttttgtttatccctttaccaaagcaaaatagcaaacacaggcttatctttatttccttgcgccttgaacaaggtttaaccacactgtacagtgacaaacagactgtgccatgctttaggaaacatacctgccccaacagaaagtagagttggatgcaataagaccactatactttatagagcagcttcaaagctaaactctggccatcactcgtacataatcaccatgtatttgtctttactttcccccaactttagatacgataatctttttttccccctacaggctaccaaggataccgagaagatatatcttggaccgcacggcgcaccgccatctcgagcaaagaagcaagaggacactgcagcagctgccactgggtaccgcgacaagagcaaggtgaaggaagctgatcaaaaggtgcttggaactggccgggacaacaaagggggcaataacttcaaccgctacaacaatgctggccaccatgtcaaggaaccctacaagagatccacttgaccttctcctctccactgaggcttgctccctgtgaaacttttctctctcctatatcaacacagcttgacgaagccaaatttacgcgatttgtcggtgtgatggatatcattgctggaattaggacaacctatcttgcagcggcatgtatacctgaactgtggccatgtacgtaccgtctgtttgctactctgggctggagcaatgcgtttgctgattttctttcgaatggaaaaatatgtgttgttccggatgtcgccgacactacaggtatctggagcattacaaagcagatccatgtctattccgtttgtcattgccatgattaatgtgcctaatacatcatcgtcgtcatctctagc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0412200, RefSeq:Os03g0412200