Os03g0413400

From RiceWiki
Revision as of 12:43, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os03g0413400| Description = Glycosyl transferase, family 8 protein| Version = NM_001056895.1 GI:115453518 GeneID:4333107| Length = 4573 bp| Def...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os03g0413400

Description

Glycosyl transferase, family 8 protein

Version

NM_001056895.1 GI:115453518 GeneID:4333107

Length

4573 bp

Definition

Oryza sativa Japonica Group Os03g0413400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17745156..17749728

Sequence Coding Region

17745673..17747127,17749249..17749419

Expression

GEO Profiles:Os03g0413400

Genome Context

<gbrowseImage1> name=NC_008396:17745156..17749728 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:17745156..17749728 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccccccgtcaggtccgcccccgggaggcgggcgccggaattccggcgctcgtcgcggcggcggctgccggagtggatctggtggctcgtcgggatcttcctcgtcctcggcctcatgctcttcgtcctgcaccacaaccagagggagcatttccgcccgcccgtagtcgataagggttcagaatttgaggaaacccatcatgagaaagtaaatttcacagaagagcttttaagcagtacatcatttgcacgccaattgacagatcaaatgactctagcaaaggcttatgttgtccttgcaaaagagcatggcaaccttcagcttgcatgggagcttagttcacagataaggaattgtcaaagattgctatctgaagaagctgttagtgggaaggccatcactaaagaagaagcccatccaataataactcggcttgcacggttaatatacaaagcacaggactctcattatgatatcagcacaacaattgtaacactgaagagccttgtcaatgcacttgaggagcgtgcaaaggcagcagttgttcagactgctgagtttggtcagttagctgcagagtccgtccccaagaatttgcactgtttaactgttaaactgacggtagagtggcttcagaacccaaaacataggggtcgctcagaagaacatcggaactccacacgattggtagacaataatctgtaccattttgccatattctctgataatgttcttgccacatcagttgttgtcaattctacagtctcaaatgcaaaccaccctcaacagcttgtatttcatgtggtcacagacagggtccactttggggctatgtcaacttggttcctcataaatgacttcaaagggtgcactgttgaagtccgctgcatagatgagttcacatggttgaatgctgctgcttctcctctggttaggcagctatctgagatggaaactcagggtttctactatggtgattctaaaaatcttgaaagagaaataaagttccataatcccaagtttgtttctctgttgaaccatttgcggttctacattcctcaaatactacctaatttggagaaggtggtttttctcgatgatgatgttgtggtacagaaggacttgacacagctattttcgatagagttgcacggtaatgttattggagcagtggagacttgtttagagtcatttcatcggtatcacaagtatcttaatttctcccacccaattatcagctccaaaattgatccgcatacttgtgggtgggcttttgggatgaacatctttgacttaatagcctggaggaaggcaaatgccacagcactttatcattattggcaagagcaaaatgctgatctattgctctggaggacagggacacttcctgcaggccttttgacgttctatggcctgatggaacccctagatcgcagatggcatgtcttggggctaggatatgatgttgacatagatgatcgtttgattgagagtgccgctgtcgtgcactacaatgggaatatgaaaccatggctgaagttagccattcgtcggtacaagtatatatgggagcggtatgtcaatttcacacacccatatgttagagagtgtttgttgcattag</cdnaseq>

Protein Sequence

<aaseq>MPPVRSAPGRRAPEFRRSSRRRLPEWIWWLVGIFLVLGLMLFVL HHNQREHFRPPVVDKGSEFEETHHEKVNFTEELLSSTSFARQLTDQMTLAKAYVVLAK EHGNLQLAWELSSQIRNCQRLLSEEAVSGKAITKEEAHPIITRLARLIYKAQDSHYDI STTIVTLKSLVNALEERAKAAVVQTAEFGQLAAESVPKNLHCLTVKLTVEWLQNPKHR GRSEEHRNSTRLVDNNLYHFAIFSDNVLATSVVVNSTVSNANHPQQLVFHVVTDRVHF GAMSTWFLINDFKGCTVEVRCIDEFTWLNAAASPLVRQLSEMETQGFYYGDSKNLERE IKFHNPKFVSLLNHLRFYIPQILPNLEKVVFLDDDVVVQKDLTQLFSIELHGNVIGAV ETCLESFHRYHKYLNFSHPIISSKIDPHTCGWAFGMNIFDLIAWRKANATALYHYWQE QNADLLLWRTGTLPAGLLTFYGLMEPLDRRWHVLGLGYDVDIDDRLIESAAVVHYNGN MKPWLKLAIRRYKYIWERYVNFTHPYVRECLLH</aaseq>

Gene Sequence

<dnaseqindica>2602..4056#310..480#taattggccccccctccgcggcctccgctcacctctcctcctcctcgcgatttccacccgcaccgccgcctgcgccgatctctccattcccgcgaccaccgccgcccgccgcccgccgcatctggccaccacgtacgcgccacgcgatcctctccttcttcttcttcttcttcatccctctctggcgccgcttctttttcttcttgagttcatgtttctttgtttggctgagcgtgttagcttgggcttgtagatctgggaggaagctttttttttttttactctactgaaatttgttcactttcagctatgccccccgtcaggtccgcccccgggaggcgggcgccggaattccggcgctcgtcgcggcggcggctgccggagtggatctggtggctcgtcgggatcttcctcgtcctcggcctcatgctcttcgtcctgcaccacaaccagagggagcatttccgcccgcccgtagtcgtgagtcctcgtcaaactcttgcttttctttttaatttctgcttgattgattcggcgcttgctgaattccgcgagatcttctgaaagatcacagcttttttttttatgctacttctttctaagagactctgaaaagtccatgctttttggtgtatagattggttctgtgtttcacctacctctttaaatggatctcaattattagcataatggtctgagatctttatctgtatgctaagtattactgtcgtgttttctttgtaattatgcgaactgaatgctagccaacttagcagacacctgtggttgagtggattggctgagctcaaattacagctatttcagtatttctagatctctctttccataattcagtataagatccttcactcaaagtcagcatctcttttctctagtctctagtaaattagtcatatttatgaaaattttagctgttcccatgtgaaaagcgtttgttttgtgatgtctaatcataactggttgttagaaatagcaaatgggctgtatggttcaagagttggtgtgacattatagataggctgtctatggacttctttggagatctgctcaagtacttaggtagagtgtcatcctcagaaggtggtttcccatcttccatgttgataacatatactactaatgtactaggaagacgattactttcttcttcgatctgatatcaatggtgtgcctttagtcaatattctatatgtagtgtcaaaggttcacaactttaacttgtgcaattgaaatattcaggggttaactgttagtcatatattttcctctgaattaataccatagggcacagttattctttttaatcatctagggatattcctgtctatcttctagagtgcaagtcatattagcttttgttatgattctgaaccatatgttacatggactgcagtaaagctttcagtttccctgtgggcacctgattagtgtcagttgattgaaatccttcattgaatggtaatgtctatgtaaactggaatttgtatttcaccaaagagatagctaaggaaaactgatgattttcaacatatgaacatgatagtgaagccgacgcaactttggcaagtttgctggtcatgatacattaataatcattagaaaaaagtattcttcctctacagtggtgtgctaatcaaattaatagaatattttatagaatatggtattttaacctaatgcacttcttccaggatctataaacttagaggcttgaattactctagtttggctaacctctcaaggttcaagctgttcgaaatttcaatcatttgattgttttccaatttattctcaagctgtaaaatttaaaggcacaacattgttggcctatgtagaaaaaagcagtttgttttgaagccaagattttctaaaatctgttgtgtcatctatattttgctaatatgtatgttttccatcctagttgactttcttggcaaaacttggccaaatgatggggacaactacctaaattttttagacatagccaaaactggacacaaccaaaaagcctaggttatttctttgttgaatcacccaagcatataatgatagcaaatgttaatagtccctcttaattctttcgacagaagtatgatctcattcttgtgcatgtttttgcctccaatttatattggaggcactaactgttcataaagacactgaacaacacatgtttataatcttaaaaaaatgcattttcatagcccctcttaatatgcacagttaatgccatagagatcaacggcaacctgttgcaataacaattaaaaactttactttggacttgaatagttggaaaatgattacaccccgcccttgaatcttgataaaagcttaccagttttgcatgcttcatactggaggattaatttgagtcatgagtgatatagctaatggaccatatgaactataaagcaaaaaaaaaaagttcattctgttacttcaagtaccttgagattttctctatcaaggagagatatttcttacaattgattctgtccactgcagaaaaatgtgttgcttttattcaaatcacttcaagtgtatgctttttcactaaattttttttacttgttccaggataagggttcagaatttgaggaaacccatcatgagaaagtaaatttcacagaagagcttttaagcagtacatcatttgcacgccaattgacagatcaaatgactctagcaaaggcttatgttgtccttgcaaaagagcatggcaaccttcagcttgcatgggagcttagttcacagataaggaattgtcaaagattgctatctgaagaagctgttagtgggaaggccatcactaaagaagaagcccatccaataataactcggcttgcacggttaatatacaaagcacaggactctcattatgatatcagcacaacaattgtaacactgaagagccttgtcaatgcacttgaggagcgtgcaaaggcagcagttgttcagactgctgagtttggtcagttagctgcagagtccgtccccaagaatttgcactgtttaactgttaaactgacggtagagtggcttcagaacccaaaacataggggtcgctcagaagaacatcggaactccacacgattggtagacaataatctgtaccattttgccatattctctgataatgttcttgccacatcagttgttgtcaattctacagtctcaaatgcaaaccaccctcaacagcttgtatttcatgtggtcacagacagggtccactttggggctatgtcaacttggttcctcataaatgacttcaaagggtgcactgttgaagtccgctgcatagatgagttcacatggttgaatgctgctgcttctcctctggttaggcagctatctgagatggaaactcagggtttctactatggtgattctaaaaatcttgaaagagaaataaagttccataatcccaagtttgtttctctgttgaaccatttgcggttctacattcctcaaatactacctaatttggagaaggtggtttttctcgatgatgatgttgtggtacagaaggacttgacacagctattttcgatagagttgcacggtaatgttattggagcagtggagacttgtttagagtcatttcatcggtatcacaagtatcttaatttctcccacccaattatcagctccaaaattgatccgcatacttgtgggtgggcttttgggatgaacatctttgacttaatagcctggaggaaggcaaatgccacagcactttatcattattggcaagagcaaaatgctgatctattgctctggaggacagggacacttcctgcaggccttttgacgttctatggcctgatggaacccctagatcgcagatggcatgtcttggggctaggatatgatgttgacatagatgatcgtttgattgagagtgccgctgtcgtgcactacaatgggaatatgaaaccatggctgaagttagccattcgtcggtacaagtatatatgggagcggtatgtcaatttcacacacccatatgttagagagtgtttgttgcattagaaagtctgcaatcactgttcaccatgaatgtgtcatgccattgaagctaggcgcttcggtttcttacatggagttgctttttggcaccttgtttaagaaatccttcggagaggtagattatatactcaagagacagcatcaaagaagccaactgttaaaatttctttttgggtgggggacttgggggagattcattttgagatgaaaataattcctttgcagatttttacatacaatttggactggaaattttagcagtctaaccagatcatctggatagatattgtaaaagagatataggtgttggatcgatggggtcaatttttgagatgtaggaaatgccaattgccgattcagctgttcagagttgctggtgttacattctttccagaacattgtgttttatactggtgaagaagcttctccttttctctttgtataaacagctctgtattcttcatacagtatgaactcagctcatttgataaaaggaaatcaaaatcattttgatgtgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0413400, RefSeq:Os03g0413400